Propagation of PedR regulog to Prochlorococcus marinus str. NATL2A

Reference regulog properties
Source regulog:	PedR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Prochlorococcus marinus str. NATL2A
Orthologous TF(s)	PMN2A_1520
Regulated genes	4

Built upon 56 sites [see more]

Predicted regulatory interactions in *Prochlorococcus marinus str. NATL2A*
	Locus tag	Position	Score	Sequence
Position: -35 Score: 3.8 Sequence: AAGTAGTATTAATT Locus tag: PMN2A_1520
	PMN2A_1520	-35	3.8	AAGTAGTATTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pedR
Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family
Cyanothece sp. ATCC 51142	cce_4720	-29	4.7	AAGTAAATGTACTA
Cyanothece sp. PCC 7425	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Cyanothece sp. PCC 8801	PCC8801_4139	-28	4.7	AAGTAAATGTACTA
Microcystis aeruginosa NIES-843	MAE_54580	-28	4.7	AAGTAAATATACGA
Nostoc sp. PCC 7120	asl2551	-194	4.5	AAGTATATTTAATT
		-33	4.6	AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313	PMT2014	-366	3.7	AAGTAAATCTGATT
Synechococcus elongatus PCC 7942	Synpcc7942_2264	-30	4.7	AAGTACAAATACTT
Synechococcus sp. PCC 7002	SYNPCC7002_A0641	-257	3.7	AAGAAAGTTTATCT
Synechocystis sp. PCC 6803	ssl0564	-28	4.8	GAGTAAATATACCT
Thermosynechococcus elongatus BP-1	null	-22	4.6	AAGTAATTATACGG
Trichodesmium erythraeum IMS101	Tery_2735	-34	5.2	AAGCAAATATACTT

Position: -189 Score: 3.6 Sequence: AAGCTAATTCACTA Position: -152 Score: 4.1 Sequence: GAGTAAAAATACGC Locus tag: PMN2A_1872
	PMN2A_1872	-189	3.6	AAGCTAATTCACTA
		-152	4.1	GAGTAAAAATACGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
Cyanothece sp. ATCC 51142	cce_4532	-155	4.3	AAGCAATTTTTCTC
Cyanothece sp. PCC 8801	PCC8801_0791	-42	4.2	AGGCAAATACACTT
Microcystis aeruginosa NIES-843	MAE_16230	-223	3.6	AAGTAAATGTATAA
Synechocystis sp. PCC 6803	slr0749	-196	4.8	AAGTAACTATACCC
		-178	4	AAGTTATTTTATTT

Position: -222 Score: 3.6 Sequence: GCGTATTTTTACTC Locus tag: PMN2A_1873
	PMN2A_1873	-222	3.6	GCGTATTTTTACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase subunit N
Cyanothece sp. ATCC 51142	cce_4534	-365	4.9	AAGTAAGTTTACCT
Cyanothece sp. PCC 8801	PCC8801_0789	-357	4.7	AAGCAACTTTACCT
Nostoc sp. PCC 7120	all5076	-7	3.7	AAGCAAAATGACCA
Synechocystis sp. PCC 6803	slr0750	-242	3.5	AATTAAAATTAATC

Position: -85 Score: 3.8 Sequence: AAGCAATAATTACT Locus tag: PMN2A_0172
	PMN2A_0172	-85	3.8	AAGCAATAATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpe
Ortholog function: Ribulose-phosphate 3-epimerase
Cyanothece sp. PCC 7425	Cyan7425_1996	-14	3.9	GAGGAACTTTACCT
Cyanothece sp. PCC 8801	PCC8801_1619	-275	3.6	AAGCAGCTATTCTG
Nostoc sp. PCC 7120	alr0782	-263	4.2	AAGCATCAATACCG
Synechococcus sp. JA-3-3Ab	CYA_0084	-109	3.5	AACCATATTTTCTC
Synechocystis sp. PCC 6803	sll0807	-27	3.5	GAGTTGAAATACTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of PedR regulog to Prochlorococcus marinus str. NATL2A

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --