Propagation of Zur regulog to Cyanothece sp. ATCC 51142
| Source regulog: | Zur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Cyanothece sp. ATCC 51142 |
| Orthologous TF(s) | cce_2881, cce_4859 |
| Regulated genes | 14 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -46
Score: 5.6 Sequence: TTAAGAACGATTATCGTTATAGT
Locus tag: cce_4833
|
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| cce_4833 | -46 | 5.6 | TTAAGAACGATTATCGTTATAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciC | ||||
| Ortholog function: Putative zinc chaperone, COG0523 family | ||||
| Cyanothece sp. ATCC 51142 | cce_4833 | -46 | 5.6 | TTAAGAACGATTATCGTTATAGT |
|
Position: 28
Score: 6.3 Sequence: ATGATAATGATTATTATTACAAT
Locus tag: cce_4835
|
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| cce_4835 | 28 | 6.3 | ATGATAATGATTATTATTACAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrS2 | ||||
| Ortholog function: Threonyl-tRNA synthetase (EC 6.1.1.3) | ||||
| Cyanothece sp. ATCC 51142 | cce_4835 | 28 | 6.3 | ATGATAATGATTATTATTACAAT |
| Cyanothece sp. ATCC 51142 | cce_1495 | 81 | 6.7 | TTGATAATGATTATCATTTTTAT |
| 127 | 6.9 | ATAATAATGATTATCATTTTTAT | ||
| Microcystis aeruginosa NIES-843 | MAE_31590 | -34 | 6 | GCTACAATGATAATCATTATCAT |
| Nostoc sp. PCC 7120 | all4723 | -28 | 5.9 | ATGATAACGATTCTCATTATTTA |
|
Position: -43
Score: 5.2 Sequence: TTTACTATGATAATGATTATCAA
Position: -37
Score: 5.4 Sequence: ATGATAATGATTATCAAAATTGA
Locus tag: cce_4845
|
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| cce_4845 | -43 | 5.2 | TTTACTATGATAATGATTATCAA | |
| -37 | 5.4 | ATGATAATGATTATCAAAATTGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisI2 | ||||
| Ortholog function: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) | ||||
| Cyanothece sp. ATCC 51142 | cce_4845 | -37 | 5.4 | ATGATAATGATTATCAAAATTGA |
| Trichodesmium erythraeum IMS101 | Tery_2490 | -37 | 4.8 | AGGATAATGATTATTAAAATTGA |
|
Position: -46
Score: 6.6 Sequence: ATAATAATGATTATCATTTTGAT
Locus tag: cce_4852
|
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| cce_4852 | -46 | 6.6 | ATAATAATGATTATCATTTTGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemB2 | ||||
| Ortholog function: Porphobilinogen synthase (EC 4.2.1.24) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0127 | -25 | 5.9 | TCGAGAATGATTATCATTTTTTA |
| Cyanothece sp. ATCC 51142 | cce_1489 | -78 | 7.1 | ATAATAATGATTATCATTATTAT |
| -32 | 5.9 | ATAATAATGATTATCGTTTCTAA | ||
| Cyanothece sp. ATCC 51142 | cce_4852 | -72 | 6 | TAAATAATAATAATCATTCTCGT |
| -46 | 6.6 | ATAATAATGATTATCATTTTGAT | ||
| Cyanothece sp. PCC 8801 | PCC8801_0777 | -72 | 5.5 | TTGATAATGATTATCATTCCGTG |
| -32 | 6.7 | ATAATAATGATTATCATTTTTAA | ||
| Microcystis aeruginosa NIES-843 | MAE_22850 | -323 | 5.9 | ATGATAACGATTATCATTCTAGG |
| Nostoc sp. PCC 7120 | all4725 | -31 | 5.7 | ATGATAATGGTTATCAATCTTGT |
|
Position: -50
Score: 5.8 Sequence: ATGAGATCAATTATCATTATCAT
Locus tag: cce_4857
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| cce_4857 | -50 | 5.8 | ATGAGATCAATTATCATTATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciC2 | ||||
| Ortholog function: Putative zinc chaperone, COG0523 family | ||||
| Cyanothece sp. ATCC 51142 | cce_4857 | -50 | 5.8 | ATGAGATCAATTATCATTATCAT |
|
Position: -120
Score: 6 Sequence: ATAATAATGATTATTATTCTACA
Locus tag: cce_4859
|
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| cce_4859 | -120 | 6 | ATAATAATGATTATTATTCTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: zur | ||||
| Ortholog function: Zinc uptake transcription regulator, Fur family | ||||
| Cyanothece sp. ATCC 51142 | cce_4859 | -120 | 6 | ATAATAATGATTATTATTCTACA |
|
Position: -72
Score: 6.1 Sequence: AAATTAACGATAATCATTCTCAT
Position: -46
Score: 6.4 Sequence: ATAATAATGGTTATCATTTTAAT
Locus tag: cce_4862
|
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| cce_4862 | -72 | 6.1 | AAATTAACGATAATCATTCTCAT | |
| -46 | 6.4 | ATAATAATGGTTATCATTTTAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: znuA | ||||
| Ortholog function: Zinc ABC transporter, substrate-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_4862 | -72 | 6.1 | AAATTAACGATAATCATTCTCAT |
| -46 | 6.4 | ATAATAATGGTTATCATTTTAAT | ||
| Cyanothece sp. PCC 7425 | Cyan7425_1915 | -104 | 6.4 | AAGGCAATGATAATCATTATCAT |
| Nostoc sp. PCC 7120 | all0833 | -110 | 6.2 | ATGAGAATGAGAATTATTATAAT |
| -80 | 5 | TGTACAATAAGTATCATTGTCAA | ||
| Trichodesmium erythraeum IMS101 | Tery_4951 | -49 | 6.9 | AAAAGAATGATAATCATTATCAT |
| Synechococcus sp. JA-3-3Ab | CYA_2532 | -39 | 5.7 | TTATGATTGATTATCATTCTCAT |
| Thermosynechococcus elongatus BP-1 | tlr2062 | -31 | 6.3 | ATGAGAATGATTATCATTCATCT |
|
Position: -62
Score: 6.4 Sequence: ATTAAAATGATAACCATTATTAT
Position: -36
Score: 6.1 Sequence: ATGAGAATGATTATCGTTAATTT
Locus tag: cce_4863
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| cce_4863 | -62 | 6.4 | ATTAAAATGATAACCATTATTAT | |
| -36 | 6.1 | ATGAGAATGATTATCGTTAATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: PF07992 | ||||
| Ortholog function: Predicted FAD-dependent oxidoreductase, PF07992 family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0132 | -70 | 6.4 | TTGATAATAATTATCATTTTTAT |
| Cyanothece sp. ATCC 51142 | cce_4863 | -62 | 6.4 | ATTAAAATGATAACCATTATTAT |
| -36 | 6.1 | ATGAGAATGATTATCGTTAATTT | ||
| Nostoc sp. PCC 7120 | all4724 | -31 | 5.7 | ATGATAATGGTTATCAATCTTGT |
| Trichodesmium erythraeum IMS101 | Tery_4613 | -43 | 6.5 | AAAAGAATGATAATCATTCTTAA |
|
Position: -40
Score: 6.7 Sequence: ACTAGAATGATTATCATTATCAT
Locus tag: cce_1484
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| cce_1484 | -40 | 6.7 | ACTAGAATGATTATCATTATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_1484 | ||||
| Ortholog function: Predicted Mn/Zn chelate ABC transporter, substrate-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_1484 | -40 | 6.7 | ACTAGAATGATTATCATTATCAT |
| Cyanothece sp. PCC 8801 | PCC8801_0773 | -40 | 7 | ATTAGAATGATTATCATTATCAT |
| Cyanothece sp. PCC 7425 | Cyan7425_0822 | -29 | 5.2 | TTGAAAATGAGAATGGTTCTTAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1316 | -59 | 4.9 | TAGGGAATGATAACGATTCTCAA |
|
Position: -31
Score: 6.7 Sequence: ATGATAATGATAATCATTCTAGT
Locus tag: cce_1485
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| cce_1485 | -31 | 6.7 | ATGATAATGATAATCATTCTAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_1485 | ||||
| Ortholog function: Predicted Mn/Zn chelate ABC transporter, ATP-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_1485 | -31 | 6.7 | ATGATAATGATAATCATTCTAGT |
| Cyanothece sp. PCC 8801 | PCC8801_0774 | -32 | 7 | ATGATAATGATAATCATTCTAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_0794 | -29 | 5.3 | ATAAGAATTATTCTCATTTTCAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1317 | -59 | 4.9 | TAGGGAATGATAACGATTCTCAA |
|
Position: -77
Score: 6.1 Sequence: TTGAGAATGATTATTATTCTTAA
Position: -44
Score: 5.8 Sequence: AAAATAATGAAAATGATTATCAT
Position: -38
Score: 6.2 Sequence: ATGAAAATGATTATCATTTTAGA
Locus tag: cce_1488
|
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| cce_1488 | -77 | 6.1 | TTGAGAATGATTATTATTCTTAA | |
| -44 | 5.8 | AAAATAATGAAAATGATTATCAT | ||
| -38 | 6.2 | ATGAAAATGATTATCATTTTAGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciC2 | ||||
| Ortholog function: Putative zinc chaperone, COG0523 family | ||||
| Cyanothece sp. ATCC 51142 | cce_1488 | -77 | 6.1 | TTGAGAATGATTATTATTCTTAA |
| -38 | 6.2 | ATGAAAATGATTATCATTTTAGA | ||
| Cyanothece sp. PCC 8801 | PCC8801_0862 | -76 | 5.4 | TTGAGAATGATTCTTATTCTTGA |
| -38 | 5.7 | ATGAGAGTGATTATCATTCTAGA | ||
| Nostoc sp. PCC 7120 | all1751 | -44 | 5 | GTGATAATGATTATCCGTATGGT |
|
Position: -78
Score: 7.1 Sequence: ATAATAATGATTATCATTATTAT
Position: -32
Score: 5.9 Sequence: ATAATAATGATTATCGTTTCTAA
Locus tag: cce_1489
|
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| cce_1489 | -78 | 7.1 | ATAATAATGATTATCATTATTAT | |
| -32 | 5.9 | ATAATAATGATTATCGTTTCTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemB2 | ||||
| Ortholog function: Porphobilinogen synthase (EC 4.2.1.24) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0127 | -25 | 5.9 | TCGAGAATGATTATCATTTTTTA |
| Cyanothece sp. ATCC 51142 | cce_1489 | -78 | 7.1 | ATAATAATGATTATCATTATTAT |
| -32 | 5.9 | ATAATAATGATTATCGTTTCTAA | ||
| Cyanothece sp. ATCC 51142 | cce_4852 | -72 | 6 | TAAATAATAATAATCATTCTCGT |
| -46 | 6.6 | ATAATAATGATTATCATTTTGAT | ||
| Cyanothece sp. PCC 8801 | PCC8801_0777 | -72 | 5.5 | TTGATAATGATTATCATTCCGTG |
| -32 | 6.7 | ATAATAATGATTATCATTTTTAA | ||
| Microcystis aeruginosa NIES-843 | MAE_22850 | -323 | 5.9 | ATGATAACGATTATCATTCTAGG |
| Nostoc sp. PCC 7120 | all4725 | -31 | 5.7 | ATGATAATGGTTATCAATCTTGT |
|
Position: -6
Score: 4.7 Sequence: CTAACAATGATTACTGTAATTAT
Locus tag: cce_1494
|
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| cce_1494 | -6 | 4.7 | CTAACAATGATTACTGTAATTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: alr1197 | ||||
| Ortholog function: Putative metallochaperone, similar to COG0523 family | ||||
| Cyanothece sp. ATCC 51142 | cce_1494 | -6 | 4.7 | CTAACAATGATTACTGTAATTAT |
| Microcystis aeruginosa NIES-843 | MAE_31630 | -6 | 5.6 | GCTAGAATGATTATCATTATCAC |