Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Cyanothece sp. ATCC 51142

Reference regulog properties
Source regulog: Zur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. ATCC 51142
Orthologous TF(s) cce_2881, cce_4859
Regulated genes 14
Built upon 84 sites [see more]
Predicted regulatory interactions in Cyanothece sp. ATCC 51142
Locus tag Position Score Sequence
Position: -46
Score: 5.6
Sequence: TTAAGAACGATTATCGTTATAGT
Locus tag: cce_4833
cce_4833 -46 5.6 TTAAGAACGATTATCGTTATAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative zinc chaperone, COG0523 family
Cyanothece sp. ATCC 51142 cce_4833 -46 5.6 TTAAGAACGATTATCGTTATAGT
Position: 28
Score: 6.3
Sequence: ATGATAATGATTATTATTACAAT
Locus tag: cce_4835
cce_4835 28 6.3 ATGATAATGATTATTATTACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrS2
Ortholog function: Threonyl-tRNA synthetase (EC 6.1.1.3)
Cyanothece sp. ATCC 51142 cce_4835 28 6.3 ATGATAATGATTATTATTACAAT
Cyanothece sp. ATCC 51142 cce_1495 81 6.7 TTGATAATGATTATCATTTTTAT
127 6.9 ATAATAATGATTATCATTTTTAT
Microcystis aeruginosa NIES-843 MAE_31590 -34 6 GCTACAATGATAATCATTATCAT
Nostoc sp. PCC 7120 all4723 -28 5.9 ATGATAACGATTCTCATTATTTA
Position: -43
Score: 5.2
Sequence: TTTACTATGATAATGATTATCAA
Position: -37
Score: 5.4
Sequence: ATGATAATGATTATCAAAATTGA
Locus tag: cce_4845
cce_4845 -43 5.2 TTTACTATGATAATGATTATCAA
-37 5.4 ATGATAATGATTATCAAAATTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisI2
Ortholog function: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)
Cyanothece sp. ATCC 51142 cce_4845 -37 5.4 ATGATAATGATTATCAAAATTGA
Trichodesmium erythraeum IMS101 Tery_2490 -37 4.8 AGGATAATGATTATTAAAATTGA
Position: -46
Score: 6.6
Sequence: ATAATAATGATTATCATTTTGAT
Locus tag: cce_4852
cce_4852 -46 6.6 ATAATAATGATTATCATTTTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemB2
Ortholog function: Porphobilinogen synthase (EC 4.2.1.24)
Synechococcus sp. PCC 7002 SYNPCC7002_G0127 -25 5.9 TCGAGAATGATTATCATTTTTTA
Cyanothece sp. ATCC 51142 cce_1489 -78 7.1 ATAATAATGATTATCATTATTAT
-32 5.9 ATAATAATGATTATCGTTTCTAA
Cyanothece sp. ATCC 51142 cce_4852 -72 6 TAAATAATAATAATCATTCTCGT
-46 6.6 ATAATAATGATTATCATTTTGAT
Cyanothece sp. PCC 8801 PCC8801_0777 -72 5.5 TTGATAATGATTATCATTCCGTG
-32 6.7 ATAATAATGATTATCATTTTTAA
Microcystis aeruginosa NIES-843 MAE_22850 -323 5.9 ATGATAACGATTATCATTCTAGG
Nostoc sp. PCC 7120 all4725 -31 5.7 ATGATAATGGTTATCAATCTTGT
Position: -50
Score: 5.8
Sequence: ATGAGATCAATTATCATTATCAT
Locus tag: cce_4857
cce_4857 -50 5.8 ATGAGATCAATTATCATTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC2
Ortholog function: Putative zinc chaperone, COG0523 family
Cyanothece sp. ATCC 51142 cce_4857 -50 5.8 ATGAGATCAATTATCATTATCAT
Position: -120
Score: 6
Sequence: ATAATAATGATTATTATTCTACA
Locus tag: cce_4859
cce_4859 -120 6 ATAATAATGATTATTATTCTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zur
Ortholog function: Zinc uptake transcription regulator, Fur family
Cyanothece sp. ATCC 51142 cce_4859 -120 6 ATAATAATGATTATTATTCTACA
Position: -72
Score: 6.1
Sequence: AAATTAACGATAATCATTCTCAT
Position: -46
Score: 6.4
Sequence: ATAATAATGGTTATCATTTTAAT
Locus tag: cce_4862
cce_4862 -72 6.1 AAATTAACGATAATCATTCTCAT
-46 6.4 ATAATAATGGTTATCATTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_4862 -72 6.1 AAATTAACGATAATCATTCTCAT
-46 6.4 ATAATAATGGTTATCATTTTAAT
Cyanothece sp. PCC 7425 Cyan7425_1915 -104 6.4 AAGGCAATGATAATCATTATCAT
Nostoc sp. PCC 7120 all0833 -110 6.2 ATGAGAATGAGAATTATTATAAT
-80 5 TGTACAATAAGTATCATTGTCAA
Trichodesmium erythraeum IMS101 Tery_4951 -49 6.9 AAAAGAATGATAATCATTATCAT
Synechococcus sp. JA-3-3Ab CYA_2532 -39 5.7 TTATGATTGATTATCATTCTCAT
Thermosynechococcus elongatus BP-1 tlr2062 -31 6.3 ATGAGAATGATTATCATTCATCT
Position: -62
Score: 6.4
Sequence: ATTAAAATGATAACCATTATTAT
Position: -36
Score: 6.1
Sequence: ATGAGAATGATTATCGTTAATTT
Locus tag: cce_4863
cce_4863 -62 6.4 ATTAAAATGATAACCATTATTAT
-36 6.1 ATGAGAATGATTATCGTTAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: PF07992
Ortholog function: Predicted FAD-dependent oxidoreductase, PF07992 family
Synechococcus sp. PCC 7002 SYNPCC7002_G0132 -70 6.4 TTGATAATAATTATCATTTTTAT
Cyanothece sp. ATCC 51142 cce_4863 -62 6.4 ATTAAAATGATAACCATTATTAT
-36 6.1 ATGAGAATGATTATCGTTAATTT
Nostoc sp. PCC 7120 all4724 -31 5.7 ATGATAATGGTTATCAATCTTGT
Trichodesmium erythraeum IMS101 Tery_4613 -43 6.5 AAAAGAATGATAATCATTCTTAA
Position: -40
Score: 6.7
Sequence: ACTAGAATGATTATCATTATCAT
Locus tag: cce_1484
cce_1484 -40 6.7 ACTAGAATGATTATCATTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1484
Ortholog function: Predicted Mn/Zn chelate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_1484 -40 6.7 ACTAGAATGATTATCATTATCAT
Cyanothece sp. PCC 8801 PCC8801_0773 -40 7 ATTAGAATGATTATCATTATCAT
Cyanothece sp. PCC 7425 Cyan7425_0822 -29 5.2 TTGAAAATGAGAATGGTTCTTAT
Synechococcus elongatus PCC 7942 Synpcc7942_1316 -59 4.9 TAGGGAATGATAACGATTCTCAA
Position: -31
Score: 6.7
Sequence: ATGATAATGATAATCATTCTAGT
Locus tag: cce_1485
cce_1485 -31 6.7 ATGATAATGATAATCATTCTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1485
Ortholog function: Predicted Mn/Zn chelate ABC transporter, ATP-binding protein
Cyanothece sp. ATCC 51142 cce_1485 -31 6.7 ATGATAATGATAATCATTCTAGT
Cyanothece sp. PCC 8801 PCC8801_0774 -32 7 ATGATAATGATAATCATTCTAAT
Cyanothece sp. PCC 7425 Cyan7425_0794 -29 5.3 ATAAGAATTATTCTCATTTTCAC
Synechococcus elongatus PCC 7942 Synpcc7942_1317 -59 4.9 TAGGGAATGATAACGATTCTCAA
Position: -77
Score: 6.1
Sequence: TTGAGAATGATTATTATTCTTAA
Position: -44
Score: 5.8
Sequence: AAAATAATGAAAATGATTATCAT
Position: -38
Score: 6.2
Sequence: ATGAAAATGATTATCATTTTAGA
Locus tag: cce_1488
cce_1488 -77 6.1 TTGAGAATGATTATTATTCTTAA
-44 5.8 AAAATAATGAAAATGATTATCAT
-38 6.2 ATGAAAATGATTATCATTTTAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC2
Ortholog function: Putative zinc chaperone, COG0523 family
Cyanothece sp. ATCC 51142 cce_1488 -77 6.1 TTGAGAATGATTATTATTCTTAA
-38 6.2 ATGAAAATGATTATCATTTTAGA
Cyanothece sp. PCC 8801 PCC8801_0862 -76 5.4 TTGAGAATGATTCTTATTCTTGA
-38 5.7 ATGAGAGTGATTATCATTCTAGA
Nostoc sp. PCC 7120 all1751 -44 5 GTGATAATGATTATCCGTATGGT
Position: -78
Score: 7.1
Sequence: ATAATAATGATTATCATTATTAT
Position: -32
Score: 5.9
Sequence: ATAATAATGATTATCGTTTCTAA
Locus tag: cce_1489
cce_1489 -78 7.1 ATAATAATGATTATCATTATTAT
-32 5.9 ATAATAATGATTATCGTTTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemB2
Ortholog function: Porphobilinogen synthase (EC 4.2.1.24)
Synechococcus sp. PCC 7002 SYNPCC7002_G0127 -25 5.9 TCGAGAATGATTATCATTTTTTA
Cyanothece sp. ATCC 51142 cce_1489 -78 7.1 ATAATAATGATTATCATTATTAT
-32 5.9 ATAATAATGATTATCGTTTCTAA
Cyanothece sp. ATCC 51142 cce_4852 -72 6 TAAATAATAATAATCATTCTCGT
-46 6.6 ATAATAATGATTATCATTTTGAT
Cyanothece sp. PCC 8801 PCC8801_0777 -72 5.5 TTGATAATGATTATCATTCCGTG
-32 6.7 ATAATAATGATTATCATTTTTAA
Microcystis aeruginosa NIES-843 MAE_22850 -323 5.9 ATGATAACGATTATCATTCTAGG
Nostoc sp. PCC 7120 all4725 -31 5.7 ATGATAATGGTTATCAATCTTGT
Position: -6
Score: 4.7
Sequence: CTAACAATGATTACTGTAATTAT
Locus tag: cce_1494
cce_1494 -6 4.7 CTAACAATGATTACTGTAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: alr1197
Ortholog function: Putative metallochaperone, similar to COG0523 family
Cyanothece sp. ATCC 51142 cce_1494 -6 4.7 CTAACAATGATTACTGTAATTAT
Microcystis aeruginosa NIES-843 MAE_31630 -6 5.6 GCTAGAATGATTATCATTATCAC
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