Propagation of PedR regulog to Cyanothece sp. PCC 7822

Reference regulog properties
Source regulog:	PedR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. PCC 7822
Orthologous TF(s)	Cyan7822DRAFT_5098
Regulated genes	6

Built upon 56 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. PCC 7822*
	Locus tag	Position	Score	Sequence
Position: -157 Score: 4.9 Sequence: AAGTATTTATACTC Position: -143 Score: 4.6 Sequence: AAGTAAATTTATCT Locus tag: Cyan7822DRAFT_0253
	Cyan7822DRAFT_0253	-157	4.9	AAGTATTTATACTC
		-143	4.6	AAGTAAATTTATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: slr1957
Ortholog function: Conserved hypothetical protein
Cyanothece sp. ATCC 51142	cce_2950	-166	4.5	AAGCATATCTACTT
Cyanothece sp. PCC 7425	Cyan7425_3849	-86	5.1	AAGTATTTATACCT
Cyanothece sp. PCC 8801	PCC8801_3714	-148	4.5	AAGCAAGATTACCT
Nostoc sp. PCC 7120	all2740	-157	4.3	AAGCATGAATACTA
Synechococcus sp. PCC 7002	SYNPCC7002_A1219	-217	5	AAGTAATTATACCC
Synechocystis sp. PCC 6803	slr1957	-18	4.8	AAGCATAAATACCT

Position: -19 Score: 5 Sequence: AAGTATTTTTACCT Locus tag: Cyan7822DRAFT_1314
	Cyan7822DRAFT_1314	-19	5	AAGTATTTTTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhD2
Ortholog function: NADH dehydrogenase subunit
Cyanothece sp. PCC 7425	Cyan7425_0836	-110	4.2	AAGTAGGTTTACCC
		-8	4.4	AAGTATTTATGCTC
Microcystis aeruginosa NIES-843	MAE_42210	-20	4.2	AGGTATTTTTTCTT
Nostoc sp. PCC 7120	alr5050	-23	4.5	AAGTATTTTTGCTT
Synechocystis sp. PCC 6803	slr1291	-20	4.3	AGGTATTTATTCTT
Trichodesmium erythraeum IMS101	Tery_3241	-103	4.7	AAGTATATATATTT
		-20	4.1	AAGTATTTGTGCTC

Position: -319 Score: 3.3 Sequence: AAGTAAGTTTGTGG Position: -42 Score: 3.6 Sequence: AAGTCATTATTTTT Locus tag: Cyan7822DRAFT_2596
	Cyan7822DRAFT_2596	-319	3.3	AAGTAAGTTTGTGG
		-42	3.6	AAGTCATTATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlB
Ortholog function: Light-independent protochlorophyllide reductase subunit B
Microcystis aeruginosa NIES-843	MAE_53860	-319	4.5	AAGCAAAATTACCG
Nostoc sp. PCC 7120	alr3441	-56	3.7	AAGCACTTATAGTC
Synechococcus sp. PCC 7002	SYNPCC7002_A1652	-14	4.6	GAGTAAAAATACCT
Synechocystis sp. PCC 6803	slr0772	-182	3.4	AAGCATTAAGAATT
Trichodesmium erythraeum IMS101	Tery_3812	-177	4.1	AGTTAAAAATACTT

Position: -28 Score: 3.9 Sequence: GAGTAATTTTGCTA Position: -14 Score: 3.8 Sequence: AGGGACAAATACTT Locus tag: Cyan7822DRAFT_5098
	Cyan7822DRAFT_5098	-28	3.9	GAGTAATTTTGCTA
		-14	3.8	AGGGACAAATACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pedR
Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family
Cyanothece sp. ATCC 51142	cce_4720	-29	4.7	AAGTAAATGTACTA
Cyanothece sp. PCC 7425	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Cyanothece sp. PCC 8801	PCC8801_4139	-28	4.7	AAGTAAATGTACTA
Microcystis aeruginosa NIES-843	MAE_54580	-28	4.7	AAGTAAATATACGA
Nostoc sp. PCC 7120	asl2551	-194	4.5	AAGTATATTTAATT
		-33	4.6	AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313	PMT2014	-366	3.7	AAGTAAATCTGATT
Synechococcus elongatus PCC 7942	Synpcc7942_2264	-30	4.7	AAGTACAAATACTT
Synechococcus sp. PCC 7002	SYNPCC7002_A0641	-257	3.7	AAGAAAGTTTATCT
Synechocystis sp. PCC 6803	ssl0564	-28	4.8	GAGTAAATATACCT
Thermosynechococcus elongatus BP-1	null	-22	4.6	AAGTAATTATACGG
Trichodesmium erythraeum IMS101	Tery_2735	-34	5.2	AAGCAAATATACTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of PedR regulog to Cyanothece sp. PCC 7822

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --