Propagation of NtcA regulog to Microcystis aeruginosa NIES-843
| Source regulog: | NtcA - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Nitrogen assimilation |
| Effector: | 2-oxoglutarate |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Microcystis aeruginosa NIES-843 |
| Orthologous TF(s) | MAE_01830 |
| Regulated genes | 23 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -8
Score: 3.8 Sequence: GGTTGACAATGTTACA
Locus tag: MAE_06180
|
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| MAE_06180 | -8 | 3.8 | GGTTGACAATGTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: urtE | ||||
| Ortholog function: Urea ABC transporter, ATP-binding protein 2 | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_2256 | -148 | 3.7 | TGTATAATAGATCACA |
| Microcystis aeruginosa NIES-843 | MAE_06180 | -8 | 3.8 | GGTTGACAATGTTACA |
| Nostoc sp. PCC 7120 | all1947 | -116 | 4.3 | AGTATCAAAAATAACA |
| Prochlorococcus marinus str. MIT 9313 | PMT2225 | -146 | 4 | TGTTGCAACAGCTACC |
| -95 | 4.7 | TGTATCATTCACTACA | ||
| Synechococcus sp. JA-3-3Ab | CYA_1920 | -248 | 3.9 | AGAAACAGAAGCTACA |
| Synechococcus sp. WH 8102 | SYNW2438 | -118 | 4 | TGTTGCAACAGCTACC |
| Thermosynechococcus elongatus BP-1 | tlr1124 | -81 | 4 | TGTAGCCTAGCATACA |
|
Position: -170
Score: 4.7 Sequence: AGTAGCAAAAATTACA
Position: -140
Score: 4.6 Sequence: AGTAGCGAAAGTTACA
Locus tag: MAE_06220
|
||||
| MAE_06220 | -170 | 4.7 | AGTAGCAAAAATTACA | |
| -140 | 4.6 | AGTAGCGAAAGTTACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: urtA | ||||
| Ortholog function: Urea ABC transporter, substrate-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0398 | -127 | 4.1 | TGTATCAAGTGTCACA |
| Synechocystis sp. PCC 6803 | slr0447 | -211 | 4.5 | GGTATCCTATGCTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_2260 | -148 | 3.7 | TGTATAATAGATCACA |
| Microcystis aeruginosa NIES-843 | MAE_06220 | -170 | 4.7 | AGTAGCAAAAATTACA |
| -140 | 4.6 | AGTAGCGAAAGTTACA | ||
| Nostoc sp. PCC 7120 | all1951 | -116 | 4.3 | AGTATCAAAAATAACA |
| Trichodesmium erythraeum IMS101 | Tery_0130 | -390 | 3.8 | AGTTACAAAAAAAACA |
| Synechococcus sp. JA-3-3Ab | CYA_1924 | -272 | 3.7 | GGTATCCCGCGATACA |
| Thermosynechococcus elongatus BP-1 | tlr1120 | -81 | 4 | TGTAGCCTAGCATACA |
|
Position: -75
Score: 3.7 Sequence: TGTAAACTGGGAAACA
Locus tag: MAE_14410
|
||||
| MAE_14410 | -75 | 3.7 | TGTAAACTGGGAAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A1954 | ||||
| Ortholog function: putative two-component sensor histidine kinase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_3053 | -198 | 4.8 | TGTAATCATAGTTACA |
| Microcystis aeruginosa NIES-843 | MAE_14410 | -75 | 3.7 | TGTAAACTGGGAAACA |
| Nostoc sp. PCC 7120 | alr3982 | -250 | 4.6 | TGTAGTGATAGCTACA |
| Trichodesmium erythraeum IMS101 | Tery_3912 | -156 | 4.3 | TGTAGTTATGGCTACC |
|
Position: -38
Score: 4.9 Sequence: TGTAAATTTAGATACA
Locus tag: MAE_14840
|
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| MAE_14840 | -38 | 4.9 | TGTAAATTTAGATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2101 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2101 | 67 | 5 | TGTATCATtaaATACA |
| Cyanothece sp. PCC 7425 | Cyan7425_0732 | -33 | 5.2 | TGTATCATAAGCTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_0732 | -33 | 5.2 | TGTATCATAAGCTACA |
| Microcystis aeruginosa NIES-843 | MAE_14840 | -38 | 4.9 | TGTAAATTTAGATACA |
| Microcystis aeruginosa NIES-843 | MAE_14840 | -38 | 4.9 | TGTAAATTTAGATACA |
|
Position: -190
Score: 4.1 Sequence: TGTTACAGACAATACA
Locus tag: MAE_18410
|
||||
| MAE_18410 | -190 | 4.1 | TGTTACAGACAATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nirA | ||||
| Ortholog function: Nitrite reductase, ferredoxin dependent | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1827 | -111 | 4 | CGTAGTTAACACTACA |
| Synechocystis sp. PCC 6803 | slr0898 | -74 | 4.7 | TGTAATTTACGTTACA |
| Cyanothece sp. ATCC 51142 | cce_1223 | -76 | 4.7 | TGTTACATTAGCTACA |
| Cyanothece sp. PCC 8801 | PCC8801_2468 | -75 | 4.6 | TGTTACAATTAATACA |
| Cyanothece sp. PCC 7425 | Cyan7425_4573 | -123 | 4.5 | TGTAACTTAATATACC |
| Microcystis aeruginosa NIES-843 | MAE_18410 | -190 | 4.1 | TGTTACAGACAATACA |
| Trichodesmium erythraeum IMS101 | Tery_1068 | -276 | 3.8 | TGTATTTTTATATAGT |
| -199 | 4.1 | TGTTATATAAGCTACG | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_1240 | -220 | 4.9 | TGTAGCAATTGCTACT |
| -149 | 4.3 | AGTATCAATGATTACT | ||
| -80 | 4.4 | TGTAGTTTCTGTTACC | ||
| Synechococcus sp. JA-3-3Ab | CYA_0612 | -72 | 3.9 | TGTAACTGCCAATACC |
| Gloeobacter violaceus PCC 7421 | gvip212 | -146 | 4 | TGTATCTGGGGTTACG |
| Thermosynechococcus elongatus BP-1 | tlr1349 | -82 | 4.6 | AGTAGCAAAATTTACA |
|
Position: -68
Score: 4.8 Sequence: TGTATCTTTAGCTACT
Locus tag: MAE_18580
|
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| MAE_18580 | -68 | 4.8 | TGTATCTTTAGCTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0264 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0264 | -29 | 5 | TGTATCAAATACTACA |
| Microcystis aeruginosa NIES-843 | MAE_18580 | -68 | 4.8 | TGTATCTTTAGCTACT |
| Nostoc sp. PCC 7120 | all1327 | -52 | 4.3 | CGTAGTGTATGTTACA |
|
Position: -141
Score: 3.8 Sequence: AGTTATTTTAAATACT
Locus tag: MAE_22930
|
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| MAE_22930 | -141 | 3.8 | AGTTATTTTAAATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1) | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0567 | -148 | 3.8 | TTTATTATTTGTTACC |
| Microcystis aeruginosa NIES-843 | MAE_22930 | -141 | 3.8 | AGTTATTTTAAATACT |
|
Position: -314
Score: 3.1 Sequence: AGTATCATTAATTTTT
Locus tag: MAE_38140
|
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| MAE_38140 | -314 | 3.1 | AGTATCATTAATTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifJ | ||||
| Ortholog function: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1443 | -272 | 4.1 | TTTATCATTTTCTACA |
| Synechocystis sp. PCC 6803 | sll0741 | -181 | 3.3 | AGAATCAACAAAAACA |
| Cyanothece sp. ATCC 51142 | cce_0953 | -52 | 3.8 | TGCAACAAAAATTACC |
| Cyanothece sp. PCC 8801 | PCC8801_3918 | -265 | 3.5 | AGTAACCATAATTATT |
| Cyanothece sp. PCC 7425 | Cyan7425_4369 | -120 | 3.1 | TCTAACGTATTCTCCA |
| Nostoc sp. PCC 7120 | alr1911 | -281 | 3.2 | TGAATTTGATGTAACC |
|
Position: -87
Score: 4.2 Sequence: TGTAATCATCTTTACA
Locus tag: MAE_38700
|
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| MAE_38700 | -87 | 4.2 | TGTAATCATCTTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2395 | ||||
| Ortholog function: hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2395 | -200 | 4.5 | TGTTACTTAAATTACA |
| -92 | 4.5 | TGTAGTAGACGTTACA | ||
| Cyanothece sp. ATCC 51142 | cce_2729 | -148 | 4 | TGTAACATATGATAAC |
| -87 | 4.6 | TGTAATATTGATTACA | ||
| Cyanothece sp. PCC 8801 | PCC8801_2066 | -53 | 4.8 | TGTAATATTAATTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_0833 | -38 | 3.7 | AGTAGTTTAATAAACT |
| Microcystis aeruginosa NIES-843 | MAE_38700 | -87 | 4.2 | TGTAATCATCTTTACA |
| Nostoc sp. PCC 7120 | alr4308 | -64 | 3.9 | GGTAGTCGGAGTTACA |
| Trichodesmium erythraeum IMS101 | Tery_0672 | -94 | 4.3 | AGTATTCAAAATTACA |
| Synechococcus sp. JA-3-3Ab | CYA_0570 | -139 | 3.9 | GGTAAGATAAAATACA |
| -81 | 4.2 | CGTATCAAAGGCTACT | ||
| Thermosynechococcus elongatus BP-1 | tlr1468 | -85 | 4.3 | TGTAGTTGAGTTTACA |
|
Position: -99
Score: 4.3 Sequence: TGTAATCGTCGATACA
Locus tag: MAE_39690
|
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| MAE_39690 | -99 | 4.3 | TGTAATCGTCGATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0076 | ||||
| Ortholog function: hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0076 | -97 | 4.2 | AGTATTGAAATATACA |
| Synechocystis sp. PCC 6803 | ssr1562 | -78 | 4.5 | TGTAATCGATAATACA |
| Cyanothece sp. ATCC 51142 | cce_0537 | -137 | 4 | TGTAAACTATGATATA |
| -93 | 4.8 | TGTAGTCTTTGTTACA | ||
| Cyanothece sp. PCC 8801 | PCC8801_3101 | -95 | 4.6 | TGTATTGGTTGTTACA |
| Microcystis aeruginosa NIES-843 | MAE_39690 | -99 | 4.3 | TGTAATCGTCGATACA |
|
Position: -257
Score: 3.6 Sequence: TGAATTATTGATTACT
Position: -213
Score: 4.6 Sequence: TGTATCAACGAATACA
Locus tag: MAE_40010
|
||||
| MAE_40010 | -257 | 3.6 | TGAATTATTGATTACT | |
| -213 | 4.6 | TGTATCAACGAATACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amt1 | ||||
| Ortholog function: ammonium transporter | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2208 | -52 | 3.7 | GGTTACTTCTGCTACC |
| Synechocystis sp. PCC 6803 | sll0108 | -189 | 4 | AGTAGTAAATCATACA |
| -18 | 4.4 | TGTAGATTAAAGTACA | ||
| Cyanothece sp. ATCC 51142 | cce_3261 | -152 | 3.5 | TGTtAaggtTGTaACA |
| Cyanothece sp. PCC 8801 | PCC8801_1229 | -264 | 5 | TGTATTTTTTGATACA |
| -229 | 4.1 | AGTAATAAAAAAAACA | ||
| Microcystis aeruginosa NIES-843 | MAE_40010 | -213 | 4.6 | TGTATCAACGAATACA |
| Trichodesmium erythraeum IMS101 | Tery_4477 | -83 | 4.9 | AGTAGCATTTGATACA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_0442 | -151 | 4.1 | TGTTACATCGATTACA |
| Prochlorococcus marinus str. MIT 9313 | PMT1853 | -160 | 3.8 | TGTAACAAAATGAACT |
| Synechococcus sp. WH 8102 | SYNW0253 | -100 | 4.2 | TGTATCAATTAACACA |
| Thermosynechococcus elongatus BP-1 | amt1 | -190 | 4.4 | TGTATAACGTGATACA |
|
Position: 14
Score: 3.5 Sequence: AGTTGTTCAAGATACC
Locus tag: MAE_47880
|
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| MAE_47880 | 14 | 3.5 | AGTTGTTCAAGATACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbcX | ||||
| Ortholog function: Predicted RuBisCo chaperone | ||||
| Nostoc sp. PCC 7120 | alr1525 | -32 | 3.6 | AGTAAAAAGAGTGACA |
|
Position: -88
Score: 4.8 Sequence: TGTATTAATAACTACA
Locus tag: MAE_53960
|
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| MAE_53960 | -88 | 4.8 | TGTATTAATAACTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narB | ||||
| Ortholog function: Nitrate reductase | ||||
| Synechocystis sp. PCC 6803 | sll1454 | -96 | 3.9 | AGTTACAAACTATACA |
| Cyanothece sp. PCC 8801 | PCC8801_2463 | -165 | 4.4 | TGTATtAccaaATACA |
| Microcystis aeruginosa NIES-843 | MAE_53960 | -88 | 4.8 | TGTATTAATAACTACA |
| Trichodesmium erythraeum IMS101 | Tery_1070 | -276 | 3.8 | TGTATTTTTATATAGT |
| -199 | 4.1 | TGTTATATAAGCTACG | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_1235 | -220 | 4.9 | TGTAGCAATTGCTACT |
| -149 | 4.3 | AGTATCAATGATTACT | ||
| -80 | 4.4 | TGTAGTTTCTGTTACC | ||
| Thermosynechococcus elongatus BP-1 | tlr1355 | -82 | 4.6 | AGTAGCAAAATTTACA |
|
Position: -126
Score: 4.9 Sequence: TGTAATTAAAGCTACA
Locus tag: MAE_54470
|
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| MAE_54470 | -126 | 4.9 | TGTAATTAAAGCTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpoD | ||||
| Ortholog function: RNA polymerase sigma 70 factor | ||||
| Synechocystis sp. PCC 6803 | slr0653 | -246 | 3.9 | TGTTATCGAGGCTACA |
| Cyanothece sp. ATCC 51142 | cce_0875 | -232 | 4.3 | AGTAATCAAGGCTACA |
| Cyanothece sp. PCC 8801 | PCC8801_0154 | -257 | 4.4 | TGTAATCGAGGCTACA |
| Microcystis aeruginosa NIES-843 | MAE_54470 | -126 | 4.9 | TGTAATTAAAGCTACA |
| Trichodesmium erythraeum IMS101 | Tery_5068 | -199 | 4 | TGTAAAATTTTGTACC |
| -46 | 3.7 | TGTAAAATAATTTATT | ||
|
Position: -30
Score: 3.7 Sequence: CGTATAGATAAATACT
Locus tag: MAE_62530
|
||||
| MAE_62530 | -30 | 3.7 | CGTATAGATAAATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: icd | ||||
| Ortholog function: Isocitrate dehydrogenase (NADP+) | ||||
| Microcystis aeruginosa NIES-843 | MAE_62530 | -30 | 3.7 | CGTATAGATAAATACT |
| Nostoc sp. PCC 7120 | alr1827 | -6 | 3.4 | TGAAATATGTACAACA |