Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing narB gene

Properties
Regulog: NtcA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Phylum: Cyanobacteria
Built upon 228 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. PCC 8801
Position: -165
Score: 4.4049
Sequence: TGTATtAccaaATACA
Locus tag: PCC8801_2463
Name: narB
Funciton: Nitrate reductase
narB -165 4.4 TGTATtAccaaATACA PCC8801_2463
Microcystis aeruginosa NIES-843
Position: -88
Score: 4.81057
Sequence: TGTATTAATAACTACA
Locus tag: MAE_53960
Name: narB
Funciton: Nitrate reductase
narB -88 4.8 TGTATTAATAACTACA MAE_53960
Synechococcus elongatus PCC 7942
Position: -220
Score: 4.87616
Sequence: TGTAGCAATTGCTACT
Position: -149
Score: 4.2705
Sequence: AGTATCAATGATTACT
Position: -80
Score: 4.39358
Sequence: TGTAGTTTCTGTTACC
Locus tag: Synpcc7942_1240
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Synpcc7942_1239
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: Synpcc7942_1238
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: Synpcc7942_1237
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: Synpcc7942_1236
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: Synpcc7942_1235
Name: narB
Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-nrtD-narB -220 4.9 TGTAGCAATTGCTACT Synpcc7942_1240
-149 4.3 AGTATCAATGATTACT
-80 4.4 TGTAGTTTCTGTTACC
Synechocystis sp. PCC 6803
Position: -96
Score: 3.91884
Sequence: AGTTACAAACTATACA
Locus tag: sll1450
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: sll1451
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: sll1452
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: sll1453
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: sll1454
Name: narB
Funciton: Nitrate reductase
nrtA-nrtB-nrtC-nrtD-narB -96 3.9 AGTTACAAACTATACA sll1450
Thermosynechococcus elongatus BP-1
Position: -82
Score: 4.62829
Sequence: AGTAGCAAAATTTACA
Locus tag: tlr1349
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: tlr1350
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: tlr1351
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: tlr1352
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: tlr1353
Name: tlr1353
Funciton: putative transposase
Locus tag: tlr1354
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: tlr1355
Name: narB
Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-tlr1353-nrtD-narB -82 4.6 AGTAGCAAAATTTACA tlr1349
Trichodesmium erythraeum IMS101
Position: -276
Score: 3.78019
Sequence: TGTATTTTTATATAGT
Position: -199
Score: 4.051
Sequence: TGTTATATAAGCTACG
Locus tag: Tery_1068
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Tery_1069
Name: nrtP
Funciton: Nitrate/nitrite transporter
Locus tag: Tery_1070
Name: narB
Funciton: Nitrate reductase
nirA-nrtP-narB -276 3.8 TGTATTTTTATATAGT Tery_1068
-199 4.1 TGTTATATAAGCTACG
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