Propagation of PedR regulog to Cyanothece sp. CCY 0110

Reference regulog properties
Source regulog:	PedR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. CCY 0110
Orthologous TF(s)	CY0110_29204
Regulated genes	6

Built upon 56 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. CCY 0110*
	Locus tag	Position	Score	Sequence
Position: -249 Score: 3.5 Sequence: AGACAATATTACCT Position: -111 Score: 3.4 Sequence: ATGTAACATTATTT Locus tag: CY0110_26228
	CY0110_26228	-249	3.5	AGACAATATTACCT
		-111	3.4	ATGTAACATTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlB
Ortholog function: Light-independent protochlorophyllide reductase subunit B
Microcystis aeruginosa NIES-843	MAE_53860	-319	4.5	AAGCAAAATTACCG
Nostoc sp. PCC 7120	alr3441	-56	3.7	AAGCACTTATAGTC
Synechococcus sp. PCC 7002	SYNPCC7002_A1652	-14	4.6	GAGTAAAAATACCT
Synechocystis sp. PCC 6803	slr0772	-182	3.4	AAGCATTAAGAATT
Trichodesmium erythraeum IMS101	Tery_3812	-177	4.1	AGTTAAAAATACTT

Position: -29 Score: 4.2 Sequence: AAGTAGATGTACTA Locus tag: CY0110_29204
	CY0110_29204	-29	4.2	AAGTAGATGTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pedR
Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family
Cyanothece sp. ATCC 51142	cce_4720	-29	4.7	AAGTAAATGTACTA
Cyanothece sp. PCC 7425	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Cyanothece sp. PCC 8801	PCC8801_4139	-28	4.7	AAGTAAATGTACTA
Microcystis aeruginosa NIES-843	MAE_54580	-28	4.7	AAGTAAATATACGA
Nostoc sp. PCC 7120	asl2551	-194	4.5	AAGTATATTTAATT
		-33	4.6	AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313	PMT2014	-366	3.7	AAGTAAATCTGATT
Synechococcus elongatus PCC 7942	Synpcc7942_2264	-30	4.7	AAGTACAAATACTT
Synechococcus sp. PCC 7002	SYNPCC7002_A0641	-257	3.7	AAGAAAGTTTATCT
Synechocystis sp. PCC 6803	ssl0564	-28	4.8	GAGTAAATATACCT
Thermosynechococcus elongatus BP-1	null	-22	4.6	AAGTAATTATACGG
Trichodesmium erythraeum IMS101	Tery_2735	-34	5.2	AAGCAAATATACTT

Position: -328 Score: 3.5 Sequence: ATATAATAATACTT Position: -179 Score: 4.3 Sequence: TAGTATTTTTACTT Locus tag: CY0110_24376
	CY0110_24376	-328	3.5	ATATAATAATACTT
		-179	4.3	TAGTATTTTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
Cyanothece sp. ATCC 51142	cce_4532	-155	4.3	AAGCAATTTTTCTC
Cyanothece sp. PCC 8801	PCC8801_0791	-42	4.2	AGGCAAATACACTT
Microcystis aeruginosa NIES-843	MAE_16230	-223	3.6	AAGTAAATGTATAA
Synechocystis sp. PCC 6803	slr0749	-196	4.8	AAGTAACTATACCC
		-178	4	AAGTTATTTTATTT

Position: -110 Score: 3.5 Sequence: AAATAAGTTTTCTC Locus tag: CY0110_15450
	CY0110_15450	-110	3.5	AAATAAGTTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpe
Ortholog function: Ribulose-phosphate 3-epimerase
Cyanothece sp. PCC 7425	Cyan7425_1996	-14	3.9	GAGGAACTTTACCT
Cyanothece sp. PCC 8801	PCC8801_1619	-275	3.6	AAGCAGCTATTCTG
Nostoc sp. PCC 7120	alr0782	-263	4.2	AAGCATCAATACCG
Synechococcus sp. JA-3-3Ab	CYA_0084	-109	3.5	AACCATATTTTCTC
Synechocystis sp. PCC 6803	sll0807	-27	3.5	GAGTTGAAATACTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of PedR regulog to Cyanothece sp. CCY 0110

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --