Propagation of PedR regulog to Cyanothece sp. PCC 7425

Reference regulog properties
Source regulog:	PedR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. PCC 7425
Orthologous TF(s)	Cyan7425_0293
Regulated genes	4

Built upon 56 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. PCC 7425*
	Locus tag	Position	Score	Sequence
Position: -28 Score: 4.3 Sequence: AAGTAATTGTACGG Locus tag: Cyan7425_0293
	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pedR
Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family
Cyanothece sp. ATCC 51142	cce_4720	-29	4.7	AAGTAAATGTACTA
Cyanothece sp. PCC 7425	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Cyanothece sp. PCC 8801	PCC8801_4139	-28	4.7	AAGTAAATGTACTA
Microcystis aeruginosa NIES-843	MAE_54580	-28	4.7	AAGTAAATATACGA
Nostoc sp. PCC 7120	asl2551	-194	4.5	AAGTATATTTAATT
		-33	4.6	AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313	PMT2014	-366	3.7	AAGTAAATCTGATT
Synechococcus elongatus PCC 7942	Synpcc7942_2264	-30	4.7	AAGTACAAATACTT
Synechococcus sp. PCC 7002	SYNPCC7002_A0641	-257	3.7	AAGAAAGTTTATCT
Synechocystis sp. PCC 6803	ssl0564	-28	4.8	GAGTAAATATACCT
Thermosynechococcus elongatus BP-1	null	-22	4.6	AAGTAATTATACGG
Trichodesmium erythraeum IMS101	Tery_2735	-34	5.2	AAGCAAATATACTT

Position: -110 Score: 4.2 Sequence: AAGTAGGTTTACCC Position: -8 Score: 4.4 Sequence: AAGTATTTATGCTC Locus tag: Cyan7425_0836
	Cyan7425_0836	-110	4.2	AAGTAGGTTTACCC
		-8	4.4	AAGTATTTATGCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhD2
Ortholog function: NADH dehydrogenase subunit
Cyanothece sp. PCC 7425	Cyan7425_0836	-110	4.2	AAGTAGGTTTACCC
		-8	4.4	AAGTATTTATGCTC
Microcystis aeruginosa NIES-843	MAE_42210	-20	4.2	AGGTATTTTTTCTT
Nostoc sp. PCC 7120	alr5050	-23	4.5	AAGTATTTTTGCTT
Synechocystis sp. PCC 6803	slr1291	-20	4.3	AGGTATTTATTCTT
Trichodesmium erythraeum IMS101	Tery_3241	-103	4.7	AAGTATATATATTT
		-20	4.1	AAGTATTTGTGCTC

Position: -14 Score: 3.9 Sequence: GAGGAACTTTACCT Locus tag: Cyan7425_1996
	Cyan7425_1996	-14	3.9	GAGGAACTTTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpe
Ortholog function: Ribulose-phosphate 3-epimerase
Cyanothece sp. PCC 7425	Cyan7425_1996	-14	3.9	GAGGAACTTTACCT
Cyanothece sp. PCC 8801	PCC8801_1619	-275	3.6	AAGCAGCTATTCTG
Nostoc sp. PCC 7120	alr0782	-263	4.2	AAGCATCAATACCG
Synechococcus sp. JA-3-3Ab	CYA_0084	-109	3.5	AACCATATTTTCTC
Synechocystis sp. PCC 6803	sll0807	-27	3.5	GAGTTGAAATACTT

Position: -86 Score: 5.1 Sequence: AAGTATTTATACCT Locus tag: Cyan7425_3849
	Cyan7425_3849	-86	5.1	AAGTATTTATACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: slr1957
Ortholog function: Conserved hypothetical protein
Cyanothece sp. ATCC 51142	cce_2950	-166	4.5	AAGCATATCTACTT
Cyanothece sp. PCC 7425	Cyan7425_3849	-86	5.1	AAGTATTTATACCT
Cyanothece sp. PCC 8801	PCC8801_3714	-148	4.5	AAGCAAGATTACCT
Nostoc sp. PCC 7120	all2740	-157	4.3	AAGCATGAATACTA
Synechococcus sp. PCC 7002	SYNPCC7002_A1219	-217	5	AAGTAATTATACCC
Synechocystis sp. PCC 6803	slr1957	-18	4.8	AAGCATAAATACCT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of PedR regulog to Cyanothece sp. PCC 7425

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --