Propagation of KdgR regulog to Enterobacter cancerogenus ATCC 35316

Reference regulog properties
Source regulog:	KdgR - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	IclR
Regulation mode:	repressor (activator)
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Enterobacter cancerogenus ATCC 35316
Orthologous TF(s)	ENTCAN_02736
Regulated genes	15

Built upon 159 sites [see more]

Predicted regulatory interactions in *Enterobacter cancerogenus ATCC 35316*
	Locus tag	Position	Score	Sequence
Position: -136 Score: 5.1 Sequence: TTTTAAACCGTCGTTTCATTA Position: -49 Score: 5.2 Sequence: AAATAAAACACCGTTTTAACG Locus tag: ENTCAN_00178
	ENTCAN_00178	-136	5.1	TTTTAAACCGTCGTTTCATTA
		-49	5.2	AAATAAAACACCGTTTTAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhiA
Ortholog function: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit
Citrobacter koseri ATCC BAA-895	CKO_04899	-138	5.1	TTTTAAACCATCGTTTCAATT
		-50	4.8	AACTAAAACAATGTTTTAACG
Enterobacter sp. 638	Ent638_3876	-134	4.5	TTTCAAACCATCGTTTCAAAA
		-49	4.8	AACTAAAACAACGTTTTAACG
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0357	-239	5.6	ATATAAAACAGCATTTCATAT

Position: -84 Score: 5.3 Sequence: TAATGGAACGACGTTTTAATA Locus tag: ENTCAN_00226
	ENTCAN_00226	-84	5.3	TAATGGAACGACGTTTTAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgK
Ortholog function: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Enterobacter sp. 638	Ent638_3923	-84	5.1	TTATGGAACGACGTTTTAATA

Position: -229 Score: 5.7 Sequence: AACTAAAACACTGTTTTATTT Locus tag: ENTCAN_00406
	ENTCAN_00406	-229	5.7	AACTAAAACACTGTTTTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgT
Ortholog function: 2-keto-3-deoxygluconate permease
Citrobacter koseri ATCC BAA-895	CKO_03757	-231	5.7	AACTAAAACAGTGTTTTATTT
Enterobacter sp. 638	Ent638_0314	-232	5.8	AACTAAAACATTGTTTTATTT

Position: -34 Score: 6 Sequence: AAATGAAACGCTGTTTTATAT Locus tag: ENTCAN_00758
	ENTCAN_00758	-34	6	AAATGAAACGCTGTTTTATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjgK
Ortholog function: cytoplasmic protein involved in polygalacturonate utilization
Escherichia coli str. K-12 substr. MG1655	b4252	-35	6	AAATGAAACGTTGTTTTAATT
Salmonella typhimurium LT2	STM4468	-32	5.7	AAATAAAACGCTGTTTTAACT
Citrobacter koseri ATCC BAA-895	CKO_03553	-33	6.2	AAATGAAACGTTGTTTTATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04658	-33	5.8	AAATGAAATGCTGTTTTATAT
Enterobacter sp. 638	Ent638_0453	-34	6	AAATGAAACATTGTTTTATAT
Yersinia pestis KIM	y0739	-41	5.9	TAATAAAACAGCATTTCATTT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0383	-41	5.1	TTGTAAAACAGGGTTTCATTT
Edwardsiella tarda EIB202	ETAE_3112	-39	5.6	AAATAAAACGCAGTTTTATAA

Position: -33 Score: 5.5 Sequence: AATTGAAACGCCATTTTATCT Locus tag: ENTCAN_00832
	ENTCAN_00832	-33	5.5	AATTGAAACGCCATTTTATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgX
Ortholog function: predicted 2-keto-3-deoxygluconate permease
Salmonella typhimurium LT2	STM4395	-34	5.8	AAATAAAACATTATTTTAATT
Citrobacter koseri ATCC BAA-895	CKO_03627	-31	5.2	AAATAAAACATTATTTCAAAG
Enterobacter sp. 638	Ent638_0375	-33	5.9	AATTGAAACGTCATTTTATTT
Yersinia pestis KIM	y1734	-22	5.8	TAACGAAACATCATTTCATTT

Position: -43 Score: 5.6 Sequence: AAGTGAAACAATGTTTTAATT Locus tag: ENTCAN_02822
	ENTCAN_02822	-43	5.6	AAGTGAAACAATGTTTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tpfX
Ortholog function: ThiJ/PfpI-family hypothetical protein
Salmonella typhimurium LT2	STM1931	-231	5.4	TTATGAAACATTGTTTCAGAT
Citrobacter koseri ATCC BAA-895	CKO_01049	-199	5.4	TTTTGAAATGATGTTTCATAT
Enterobacter sp. 638	Ent638_2477	-42	5	GGATGAAACGCTGTTTTAAAT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0102	-85	6.1	TAATAAAACATCGTTTCATTT

Position: -72 Score: 4.9 Sequence: ATTTGAAATGGAGTTTCAACT Locus tag: ENTCAN_02996
	ENTCAN_02996	-72	4.9	ATTTGAAATGGAGTTTCAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeeO
Ortholog function: predicted multidrug efflux system, MATE family
Escherichia coli str. K-12 substr. MG1655	b1985	-7	4.9	ATTTGAAATGTGGTTTCACTT
Salmonella typhimurium LT2	STM2013	-7	5	TATTGAAATGTGGTTTCAACT
Citrobacter koseri ATCC BAA-895	CKO_00837	-7	4.9	ATTTGAAATGAGGTTTCAACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02447	-40	5.1	ATTTGAAATGTTGTTTCAACA
Enterobacter sp. 638	Ent638_2574	-74	5	ATTTGAAATGTAGTTTCAACT
Yersinia pestis KIM	y2593	-158	4.8	TCATGAAACTATGTTCCATTT
Serratia proteamaculans 568	Spro_3106	-39	5.2	ATTTGAAATGTTGTTTCACTT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2762	-140	5.1	AATAGAAACGTCATTTTAAAA

Position: -108 Score: 5.4 Sequence: AAATGAAATGCTATTTTGATT Locus tag: ENTCAN_03147
	ENTCAN_03147	-108	5.4	AAATGAAATGCTATTTTGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: setC
Ortholog function: lactose/glucose efflux system
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02601	-102	5	TTTTGAAACGCCTTTTTAATT
Enterobacter sp. 638	Ent638_2764	-109	4.9	TTTTGAAATGCTATTTTGATT

Position: -2 Score: 5.6 Sequence: AAATGAAACAATGTTTCACAT Locus tag: ENTCAN_04149
	ENTCAN_04149	-2	5.6	AAATGAAACAATGTTTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgF
Ortholog function: Pectin degradation protein KdgF
Citrobacter koseri ATCC BAA-895	CKO_04218	-38	5.6	AGTTGAAACATTGTTTCAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03255	-39	5.8	AAATGAAACAATGTTTCACTT
Enterobacter sp. 638	Ent638_3287	-38	5.5	AATTAAAACAATGTTTCACTA
Yersinia pestis KIM	y1888	-155	6	AAATGAAATGATGTTTTATTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2399	-174	6.1	AAATGAAATAATGTTTTATTT

Position: -302 Score: 5.1 Sequence: TATTGAAACACCGTTTCGACA Position: -226 Score: 5.4 Sequence: AATTAAAACGACGTTTTAGTA Locus tag: ENTCAN_04151
	ENTCAN_04151	-302	5.1	TATTGAAACACCGTTTCGACA
		-226	5.4	AATTAAAACGACGTTTTAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: togM
Ortholog function: oligogalacturonide ABC transporter, inner membrane permease
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03256	-288	5	TTTTGAAACATCGTTTCGACT
		-211	5.6	AATTAAAACGGTGTTTTATAA
Enterobacter sp. 638	Ent638_3289	-226	5.1	AATTAAAACGCCGTTTTACAA
Yersinia pestis KIM	y1884	-152	4.5	AATCAAAACAACGTTCCGACT
		-76	5.2	GATTGAAACGATGTTTCTATT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2403	-139	4.5	AATCAAAACAACGTTCCGACT
		-61	5.3	AATCAAAACAGTGTTTCTATT

Position: -71 Score: 5 Sequence: CATTGAAACGATGTTTTGATA Locus tag: ENTCAN_04160
	ENTCAN_04160	-71	5	CATTGAAACGATGTTTTGATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ogl
Ortholog function: Oligogalacturonate lyase (EC 4.2.2.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03266	-299	5.8	ATTTAAAACGATGTTTCATTT
		-103	5.6	TAATGAAACAATGTTTTGATA
Enterobacter sp. 638	Ent638_3297	-105	5	CATTGAAACGTCGTTTTGATA

Position: -33 Score: 5.6 Sequence: AAAAGAAACGTTATTTTAATT Locus tag: ENTCAN_04162
	ENTCAN_04162	-33	5.6	AAAAGAAACGTTATTTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgM
Ortholog function: Oligogalacturonate-specific porin protein KdgM
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03267	-58	5.8	AAATAAAATGATGTTTCATAA
		-37	5.6	AAACGAAATGTCATTTTATTT
Enterobacter sp. 638	Ent638_3298	-54	4.9	AAATAAAATGCAGTTCCATAA
		-33	5.4	AAACGAAATGACATTTTAATT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of KdgR regulog to Enterobacter cancerogenus ATCC 35316

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --