Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LiaR regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog: LiaR - Bacillales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Cell wall-active antibiotics stress response
Effector: LiaS, sensor histidine kinase (bacitracin, nisin, ramoplanin, vancomycin)
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC10
Orthologous TF(s) GYMC10_5094, GYMC10_5507
Regulated genes 1
Built upon 11 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC10
Locus tag Position Score Sequence
Position: -105
Score: 4.5
Sequence: CTCGGTCTCGAGACCGAG
Locus tag: GYMC10_5096
GYMC10_5096 -105 4.5 CTCGGTCTCGAGACCGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: liaF
Ortholog function: Inhibitor of LiaR-dependent gene expression LiaF
Bacillus amyloliquefaciens FZB42 RBAM_030230 -99 5.1 ATACGACTCCGGTCTGAT
Bacillus licheniformis DSM 13 BLi03494 -99 4.8 ATACGACCCTGGTCGTAC
Bacillus pumilus SAFR-032 BPUM_2965 -100 4.6 TTACGACTCTGGTCGCAA
Bacillus subtilis subsp. subtilis str. 168 BSU33100 -99 5.2 ATACGACTCCGGTCTTAT
Paenibacillus sp. JDR-2 Pjdr2_4787 -115 4.8 CTCCGTCTCGAGACCGAT