Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RhaR regulog to Yersinia intermedia ATCC 29909

Reference regulog properties
Source regulog: RhaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Propagated regulon:
Target genome Yersinia intermedia ATCC 29909
Orthologous TF(s) YintA_01002977
Regulated genes 2
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Yersinia intermedia ATCC 29909
Locus tag Position Score Sequence
Position: -265
Score: 10.2
Sequence: ACCTTCTCATCACTGCCA-(15)-TGGCAAAATGACGAAAGT
Locus tag: YintA_01002978
YintA_01002978 -265 10.2 ACCTTCTCATCACTGCCA-(15)-TGGCAAAATGACGAAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaS
Ortholog function: L-rhamnose operon transcriptional activator RhaS, AraC family
Citrobacter koseri ATCC BAA-895 CKO_03099 -108 10.2 TTCTTGAAAAAACGACC-(17)-CGTTAAAAATTTAAGGT
Enterobacter sp. 638 Ent638_4066 -108 10.6 TTCTTAAAAATCCGACA-(17)-TGTCGAAAATTGAAGGT