Orthologous regulated operons containing rhaS gene

Properties
Regulog:	RhaR - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	AraC
Regulation mode:	activator
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Phylum:	Proteobacteria

Built upon 7 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -108 Score: 10.1867 Sequence: TTCTTGAAAAAACGACC-(17)-CGTTAAAAATTTAAGGT Locus tag: CKO_03099 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family
rhaS	-108	10.2	TTCTTGAAAAAACGACC-(17)-CGTTAAAAATTTAAGGT	CKO_03099
Enterobacter sp. 638
Position: -108 Score: 10.5876 Sequence: TTCTTAAAAATCCGACA-(17)-TGTCGAAAATTGAAGGT Locus tag: Ent638_4066 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family Locus tag: Ent638_4065 Name: rhaR Funciton: L-rhamnose operon transcriptional activator RhaR, AraC family
rhaS-rhaR	-108	10.6	TTCTTAAAAATCCGACA-(17)-TGTCGAAAATTGAAGGT	Ent638_4066
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -103 Score: 9.60196 Sequence: ATCTTAAAAAAAGAGCA-(17)-TGACGGTATTTTAAGGT Locus tag: ECA0441 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family Locus tag: ECA0442 Name: rhaR Funciton: L-rhamnose operon transcriptional activator RhaR, AraC family
rhaS-rhaR	-103	9.6	ATCTTAAAAAAAGAGCA-(17)-TGACGGTATTTTAAGGT	ECA0441
Escherichia coli str. K-12 substr. MG1655
Position: -107 Score: 10.8617 Sequence: ATCTTGAAAAATCGACG-(17)-CGTCGAAAATTTAAGGT Locus tag: b3905 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family Locus tag: b3906 Name: rhaR Funciton: L-rhamnose operon transcriptional activator RhaR, AraC family
rhaS-rhaR	-107	10.9	ATCTTGAAAAATCGACG-(17)-CGTCGAAAATTTAAGGT	b3905
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -118 Score: 9.60437 Sequence: TTCTTGAAAAAGCGGCA-(17)-GGTCAAAAATTGAAGGC Locus tag: KPN_04214 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family Locus tag: KPN_04215 Name: rhaR Funciton: L-rhamnose operon transcriptional activator RhaR, AraC family
rhaS-rhaR	-118	9.6	TTCTTGAAAAAGCGGCA-(17)-GGTCAAAAATTGAAGGC	KPN_04214
Salmonella typhimurium LT2
Position: -107 Score: 10.1724 Sequence: TTCTTGAAAAAAAGACC-(17)-CGTCAAAAATTTAAGGT Locus tag: STM4048 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family Locus tag: STM4049 Name: rhaR Funciton: L-rhamnose operon transcriptional activator RhaR, AraC family
rhaS-rhaR	-107	10.2	TTCTTGAAAAAAAGACC-(17)-CGTCAAAAATTTAAGGT	STM4048
Yersinia pestis KIM
Position: -128 Score: 9.36644 Sequence: ATCTAAAAAAAATCGCT-(17)-TGTCAAAAATTGAAGGT Locus tag: y0590 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family
rhaS	-128	9.4	ATCTAAAAAAAATCGCT-(17)-TGTCAAAAATTGAAGGT	y0590

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing rhaS gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --