Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog RhaR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 7 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Citrobacter koseri ATCC BAA-895 1 1
Edwardsiella tarda EIB202
Enterobacter sp. 638 2 1
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043 2 1
Escherichia coli str. K-12 substr. MG1655 2 1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 2 1
Photorhabdus luminescens subsp. laumondii TTO1
Proteus mirabilis HI4320
Salmonella typhimurium LT2 2 1
Serratia proteamaculans 568
Yersinia pestis KIM 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rhaS
*
Citrobacter koseri ATCC BAA-895

Site:
position = -108
score = 10.1867
sequence = TTCTTGAAAAAACGACC-(17)-CGTTAAAAATTTAAGGT

Gene: CKO_03099: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -108
score = 10.5876
sequence = TTCTTAAAAATCCGACA-(17)-TGTCGAAAATTGAAGGT

Gene: Ent638_4066: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -103
score = 9.60196
sequence = ATCTTAAAAAAAGAGCA-(17)-TGACGGTATTTTAAGGT

Gene: ECA0441: L-rhamnose operon transcriptional activator RhaS, AraC family
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -107
score = 10.8617
sequence = ATCTTGAAAAATCGACG-(17)-CGTCGAAAATTTAAGGT

Gene: b3905: L-rhamnose operon transcriptional activator RhaS, AraC family
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -118
score = 9.60437
sequence = TTCTTGAAAAAGCGGCA-(17)-GGTCAAAAATTGAAGGC

Gene: KPN_04214: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -107
score = 10.1724
sequence = TTCTTGAAAAAAAGACC-(17)-CGTCAAAAATTTAAGGT

Gene: STM4048: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Serratia proteamaculans 568
*
Yersinia pestis KIM

Site:
position = -128
score = 9.36644
sequence = ATCTAAAAAAAATCGCT-(17)-TGTCAAAAATTGAAGGT

Gene: y0590: L-rhamnose operon transcriptional activator RhaS, AraC family
L-rhamnose operon transcriptional activator RhaS, AraC family
rhaR
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03095: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4065: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0442: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3906: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04215: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4049: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Serratia proteamaculans 568
 
Yersinia pestis KIM

Gene: y0591: L-rhamnose operon transcriptional activator RhaR, AraC family
L-rhamnose operon transcriptional activator RhaR, AraC family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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