Regulog RhaR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - AraC
- By effector - Rhamnose
- By pathway - Rhamnose utilization
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 1 | 1 |
| Edwardsiella tarda EIB202 | ||
| Enterobacter sp. 638 | 2 | 1 |
| Erwinia amylovora ATCC 49946 | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | 2 | 1 |
| Escherichia coli str. K-12 substr. MG1655 | 2 | 1 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 2 | 1 |
| Photorhabdus luminescens subsp. laumondii TTO1 | ||
| Proteus mirabilis HI4320 | ||
| Salmonella typhimurium LT2 | 2 | 1 |
| Serratia proteamaculans 568 | ||
| Yersinia pestis KIM | 1 | 1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| rhaS |
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Citrobacter koseri ATCC BAA-895 Site: position = -108 score = 10.1867 sequence = TTCTTGAAAAAACGACC-(17)-CGTTAAAAATTTAAGGT Gene: CKO_03099: L-rhamnose operon transcriptional activator RhaS, AraC family |
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Enterobacter sp. 638 Site: position = -108 score = 10.5876 sequence = TTCTTAAAAATCCGACA-(17)-TGTCGAAAATTGAAGGT Gene: Ent638_4066: L-rhamnose operon transcriptional activator RhaS, AraC family |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -103 score = 9.60196 sequence = ATCTTAAAAAAAGAGCA-(17)-TGACGGTATTTTAAGGT Gene: ECA0441: L-rhamnose operon transcriptional activator RhaS, AraC family |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -107 score = 10.8617 sequence = ATCTTGAAAAATCGACG-(17)-CGTCGAAAATTTAAGGT Gene: b3905: L-rhamnose operon transcriptional activator RhaS, AraC family |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -118 score = 9.60437 sequence = TTCTTGAAAAAGCGGCA-(17)-GGTCAAAAATTGAAGGC Gene: KPN_04214: L-rhamnose operon transcriptional activator RhaS, AraC family |
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Salmonella typhimurium LT2 Site: position = -107 score = 10.1724 sequence = TTCTTGAAAAAAAGACC-(17)-CGTCAAAAATTTAAGGT Gene: STM4048: L-rhamnose operon transcriptional activator RhaS, AraC family |
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Yersinia pestis KIM Site: position = -128 score = 9.36644 sequence = ATCTAAAAAAAATCGCT-(17)-TGTCAAAAATTGAAGGT Gene: y0590: L-rhamnose operon transcriptional activator RhaS, AraC family |
L-rhamnose operon transcriptional activator RhaS, AraC family |
| rhaR |
Gene: CKO_03095: L-rhamnose operon transcriptional activator RhaR, AraC family |
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Gene: Ent638_4065: L-rhamnose operon transcriptional activator RhaR, AraC family |
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Gene: ECA0442: L-rhamnose operon transcriptional activator RhaR, AraC family |
Gene: b3906: L-rhamnose operon transcriptional activator RhaR, AraC family |
Gene: KPN_04215: L-rhamnose operon transcriptional activator RhaR, AraC family |
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Gene: STM4049: L-rhamnose operon transcriptional activator RhaR, AraC family |
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Gene: y0591: L-rhamnose operon transcriptional activator RhaR, AraC family |
L-rhamnose operon transcriptional activator RhaR, AraC family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |