Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Dickeya dadantii Ech586

Reference regulog properties
Source regulog: Zur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii Ech586
Orthologous TF(s) Dd586_0542
Regulated genes 4
Built upon 65 sites [see more]
Predicted regulatory interactions in Dickeya dadantii Ech586
Locus tag Position Score Sequence
Position: -57
Score: 5.9
Sequence: TATTTGTTATGTTATAACATAAC
Position: -52
Score: 5.8
Sequence: GTTATGTTATAACATAACAAATT
Locus tag: Dd586_0501
Dd586_0501 -57 5.9 TATTTGTTATGTTATAACATAAC
-52 5.8 GTTATGTTATAACATAACAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4254
Ortholog function: predicted zinc-regulated ABC transporter, ATP-binding protein
Citrobacter koseri ATCC BAA-895 CKO_00850 -29 6.1 TAATTGTTATGATATAACATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4254 -55 5.4 AATTTGGTATGTTATAACATACC
Position: -31
Score: 5.7
Sequence: GATATGTTATAACATAACAAAAG
Locus tag: Dd586_1051
Dd586_1051 -31 5.7 GATATGTTATAACATAACAAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 paralog
Escherichia coli str. K-12 substr. MG1655 b0296 -34 5.6 TTATGGTTATGTTATAACATAAC
Salmonella typhimurium LT2 STM0469 -35 5.8 TTATTGTTATGTTATAACATAAT
Citrobacter koseri ATCC BAA-895 CKO_02696 -35 5.5 TTATTGTTACGTTATAACATAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00435 -35 5.5 TTATTGTTATGTTATAACGTAAT
Enterobacter sp. 638 Ent638_0934 -37 5.6 CTTTTGTTATGTTATAACAAAAC
Erwinia amylovora ATCC 49946 EAM_1015 -36 6 TTTTGGTTATATTATAACATATC
Yersinia pestis KIM y1048 -36 5.9 ATGATGTTACATTATAACATACT
Serratia proteamaculans 568 Spro_1125 -36 6.2 TTATTGTTATAGTATAACATTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1168 -31 6 GATATGTTATAACATAACAATTG
Proteus mirabilis HI4320 PMI3379 -38 6.5 ATATTGTTATATTATAACATTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0036 -32 6.2 GTAATGTTATATTATTACAATTT
Position: -106
Score: 6.2
Sequence: TAATTGTTATGTTATAACATATC
Locus tag: Dd586_1711
Dd586_1711 -106 6.2 TAATTGTTATGTTATAACATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative zinc chaperone, COG0523 family
Citrobacter koseri ATCC BAA-895 CKO_00925 -25 5.6 TTATTGTTACGTTATAACATAAC
Serratia proteamaculans 568 Spro_2626 -69 5.8 GATATGTTATAACATAACAAAAT
Position: -3
Score: 5.8
Sequence: ACAATGTTACATTATAACAATTT
Locus tag: Dd586_3079
Dd586_3079 -3 5.8 ACAATGTTACATTATAACAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA3248
Ortholog function: ABC-type uncharacterized transport system, periplasmic component
Yersinia pestis KIM y1329 6 5.1 TATGTGTTACATTATAACGGTTT
Serratia proteamaculans 568 Spro_3632 -3 5.3 TTTATGTTACTTTATAACAATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3248 -3 5.7 ATAATGTTACATTATAACGCTTT
Proteus mirabilis HI4320 PMI1519 -42 6.1 GTGATGTTATATTATAACAAAAT
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