Propagation of RhaS regulog to Salmonella enterica subsp. enterica serovar Typhi str. M223
| Source regulog: | RhaS - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Typhi str. M223 |
| Orthologous TF(s) | SentesT_010100023540 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -146
Score: 11.1 Sequence: CTCTTTGCGTTTTTGCCA-(15)-TGGCAGAAACAAAAAGGT
Locus tag: SentesT_010100019360
|
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| SentesT_010100019360 | -146 | 11.1 | CTCTTTGCGTTTTTGCCA-(15)-TGGCAGAAACAAAAAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhiN2 | ||||
| Ortholog function: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) | ||||
| Salmonella typhimurium LT2 | STM1911 | -146 | 11.1 | CTCTTTGCGTTTTTGCCA-(15)-TGGCAGAAACAAAAAGGT |
|
Position: -105
Score: 11.3 Sequence: ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT
Locus tag: SentesT_010100023535
|
||||
| SentesT_010100023535 | -105 | 11.3 | ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaB | ||||
| Ortholog function: Rhamnulokinase (EC 2.7.1.5) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03100 | -160 | 10.7 | ACCTTTGCCTCCTTGCCA-(15)-TGTCAGTAACAGGAAGGT |
| Enterobacter sp. 638 | Ent638_4067 | -107 | 10.1 | ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0440 | -105 | 9.7 | AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT |
| Escherichia coli str. K-12 substr. MG1655 | b3904 | -105 | 11.1 | ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04213 | -106 | 10.5 | ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT |
| Salmonella typhimurium LT2 | STM4047 | -105 | 11.3 | ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT |
| Yersinia pestis KIM | y0587 | -212 | 10.1 | ACTTTCGTCATTCTGCCA-(15)-TGGCAGTGATGAGAAGGT |
|
Position: -232
Score: 10.5 Sequence: ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT
Locus tag: SentesT_010100023540
|
||||
| SentesT_010100023540 | -232 | 10.5 | ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaS | ||||
| Ortholog function: L-rhamnose operon transcriptional activator RhaS, AraC family | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03099 | -245 | 10.5 | ACCTTCCTGTTACTGACA-(15)-TGGCAAGGAGGCAAAGGT |
| Enterobacter sp. 638 | Ent638_4066 | -245 | 9.1 | ACCTTCTCGCCACTGACA-(15)-TGGCAAGGAATCAAAGAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0441 | -262 | 9.8 | ACCTTCCAATGAGTGCCA-(15)-TGGCAAAATGACAAAGCT |
| Escherichia coli str. K-12 substr. MG1655 | b3905 | -232 | 10.3 | ACCTTCTCGTTACTGACA-(14)-TGGCAACCAGGGAAAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04214 | -255 | 10.1 | ACCTTCTCGTTACGGACA-(15)-TGGCAAGAAAGCAAAGGT |
| Salmonella typhimurium LT2 | STM4048 | -232 | 10.5 | ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT |
| Yersinia pestis KIM | y0590 | -265 | 10.2 | ACCTTCTCATCACTGCCA-(15)-TGGCAGAATGACGAAAGT |