Propagation of Crp regulog to Escherichia coli O157:H7 str. EC4206
| Source regulog: | Crp - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Escherichia coli O157:H7 str. EC4206 |
| Orthologous TF(s) | EschericcoliO157_010100004215 |
| Regulated genes | 233 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -66
Score: 3.7 Sequence: TAGTGTATTTTTATTCATAAAT
Locus tag: EschericcoliO157_010100000075
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| EschericcoliO157_010100000075 | -66 | 3.7 | TAGTGTATTTTTATTCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argE | ||||
| Ortholog function: acetylornithine deacetylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3957 | -66 | 3.7 | TAGTGTATTTTTATTCATAAAT |
| Salmonella typhimurium LT2 | STM4120 | -66 | 3.9 | TAATGTATTTTTATTCATAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03037 | -27 | 4.3 | TAATGTATTTTTATTCACAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04246 | -27 | 4 | TATTGTATTTTTATTCAAAATA |
| Enterobacter sp. 638 | Ent638_4029 | -66 | 4.2 | TAGTGTATTTTTATTCACATTT |
| Erwinia amylovora ATCC 49946 | EAM_0137 | -66 | 3.8 | TATTGTATTTTTATTCACTATT |
| Yersinia pestis KIM | y0309 | -223 | 3.6 | TATTTTTATTTATGTCAATAAA |
| Serratia proteamaculans 568 | Spro_4782 | -71 | 4.3 | TATTGTATTTTTATTCACAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0191 | -65 | 4 | TATTGTATTTTTATTCAAAATA |
| Edwardsiella tarda EIB202 | ETAE_3483 | -65 | 3.9 | TATTGTATTTTTATTCATAATT |
| Proteus mirabilis HI4320 | PMI3236 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4745 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
|
Position: -147
Score: 4.3 Sequence: AGTTATGAGGCGGATCGCATTT
Locus tag: EschericcoliO157_010100000115
|
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| EschericcoliO157_010100000115 | -147 | 4.3 | AGTTATGAGGCGGATCGCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: frwC | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3949 | -202 | 4 | ATTTGCGACGCGTCTCACAAGA |
| -147 | 4.3 | AGTTATGAGGCGGATCGCATTT | ||
| -57 | 3.9 | TATTGTTTCCTCCATCAAAAAT | ||
| Salmonella typhimurium LT2 | STM4112 | -221 | 4.1 | AAATGTAATGTAGCGCAAAAAG |
| -202 | 4 | AAGTGCGAGTTGTCTCACAACT | ||
| -147 | 4.3 | AGTTATGAAGCGGATCGCATTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03045 | -202 | 3.9 | AATTGCGAGACACTTCACAAGT |
| -147 | 4.3 | AGTTATGAGGCGGATCGCATTT | ||
| Yersinia pestis KIM | y3777 | -258 | 4.5 | AATTGGGATATTGCTCACAAAG |
|
Position: -128
Score: 3.9 Sequence: AAATTCAATATTCATCACACTT
Locus tag: EschericcoliO157_010100000225
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| EschericcoliO157_010100000225 | -128 | 3.9 | AAATTCAATATTCATCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cytR | ||||
| Ortholog function: transcriptional repressor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3934 | -128 | 3.9 | AAATTCAATATTCATCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03060 | -129 | 3.8 | AAATTAAATATCCATCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04229 | -162 | 3.6 | TCTTGCGAGCCGGATCGAAAAA |
| -143 | 3.9 | AAATTTAACAAGCATCACGTTT | ||
| Yersinia pestis KIM | y0297 | -177 | 3.7 | TTCTGCGAGCCAGTTCGAAAAA |
| -135 | 3.6 | TTATGCAAATTAGGTAACAAAT | ||
| Edwardsiella tarda EIB202 | ETAE_3434 | -258 | 4.2 | AAGTGCGATCGGGATCGAAAAA |
| -175 | 3.6 | ATATGTGATCATATACTCATCG | ||
| Proteus mirabilis HI4320 | PMI3218 | -207 | 4.3 | TTTTGCGAACTACCTCATAAAA |
| -189 | 3.9 | AAAAACGATTGGTATCACACTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4760 | -213 | 4.2 | ATTTGCGAGCCATATCGAATAA |
| -195 | 4.6 | ATAAATGATTTATATCACACTT | ||
|
Position: -144
Score: 4.1 Sequence: TTTTATGACGAAGCACACACAT
Locus tag: EschericcoliO157_010100000280
|
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| EschericcoliO157_010100000280 | -144 | 4.1 | TTTTATGACGAAGCACACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: facilitator for glycerol uptake | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3927 | -142 | 4 | TTTTATGACGAGGCACACACAT |
|
Position: -229
Score: 3.6 Sequence: AATCGTGCTGTCGATTAACCTT
Position: -161
Score: 3.8 Sequence: GTGGGTGATTTGCTTCACATCT
Locus tag: EschericcoliO157_010100000390
|
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| EschericcoliO157_010100000390 | -229 | 3.6 | AATCGTGCTGTCGATTAACCTT | |
| -161 | 3.8 | GTGGGTGATTTGCTTCACATCT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3908 | -161 | 3.8 | GTGGGTGATTTGCTTCACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_03093 | -150 | 4.4 | ACGGGTGATTTGGCTCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -150 | 4 | TTAGTTGTTCTACATCACAAAA |
| Enterobacter sp. 638 | Ent638_4063 | -160 | 3.6 | CCGCGTGAGCAGACTCACAATT |
| Proteus mirabilis HI4320 | PMI3036 | -292 | 3.7 | TTTTGCGCATAAGATCACGAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -297 | 3.7 | TTTTGCGCGGAAGATCACGCAA |
|
Position: -144
Score: 5.4 Sequence: TTATGTGATTTGCATCACCTTT
Locus tag: EschericcoliO157_010100000860
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| EschericcoliO157_010100000860 | -144 | 5.4 | TTATGTGATTTGCATCACCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: udp | ||||
| Ortholog function: Uridine phosphorylase (EC 2.4.2.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3831 | -144 | 5.2 | TTATGTGATTTGCATCACTTTT |
| -92 | 4.2 | CATGGTGATGAGTATCACGAAA | ||
| Salmonella typhimurium LT2 | STM3968 | -144 | 5.1 | TATTGTGATGAACATCACTTTT |
| -92 | 4.1 | CATAGTGATGGCTGTCACGAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00173 | -143 | 5.2 | TTATGTGATGTAAATCACTATT |
| -91 | 3.9 | CATGGTGATGAGCGTCACGAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04327 | -143 | 5.2 | TAATGTGATGTGTATCACTATT |
| -91 | 4.1 | CTTGGTGACTATCATCACAAAA | ||
| Enterobacter sp. 638 | Ent638_3962 | -143 | 4.7 | TAGTGTGATGCATGTCACTATT |
| Erwinia amylovora ATCC 49946 | EAM_0200 | -143 | 4.6 | AATTGCGACTTGTATCACCTTT |
| -90 | 4 | ATTAAGGATGTTCATCACATAA | ||
| Yersinia pestis KIM | y0444 | -149 | 5.4 | ATGTGTGATTTAAATCACAATT |
| -97 | 4 | CAAGGTGACATAAATCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0244 | -143 | 5.3 | TTTTGTGACTTTAATCACAAAA |
| -125 | 3.7 | AAAAGTTATGTAGATTGCATTC | ||
| -91 | 4.1 | CATAGTGATGGTTGTCACGAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0185 | -197 | 5.1 | AAAAGTGATTTAAGTCACATTT |
| Edwardsiella tarda EIB202 | ETAE_0143 | -148 | 4.7 | TATTGTGAAAATAATCACAGTT |
| Proteus mirabilis HI4320 | PMI3532 | -145 | 5.1 | ATTTGTGATAACTATCACGTTT |
| -93 | 3.6 | ACAGGTGACGTCAATCACTAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4417 | -271 | 5.2 | TTTTGTGATTTATATCTCAAAA |
| -219 | 4 | TGAAGTGACATTTATCACTAAA | ||
|
Position: -172
Score: 4 Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: EschericcoliO157_010100001025
|
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| EschericcoliO157_010100001025 | -172 | 4 | AGGTGTTAAATTGATCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cyaA | ||||
| Ortholog function: Adenylate cyclase (EC 4.6.1.1) | ||||
| Salmonella typhimurium LT2 | STM3939 | -164 | 4 | AGGTGTTAAATTGATCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00148 | -174 | 4 | AGGTGTTAAATTGATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04305 | -147 | 4 | AGGTGTTAAATTGATCACGTTT |
|
Position: -215
Score: 4.2 Sequence: AAACGTGATCAATTTAACACCT
Locus tag: EschericcoliO157_010100001035
|
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| EschericcoliO157_010100001035 | -215 | 4.2 | AAACGTGATCAATTTAACACCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemC | ||||
| Ortholog function: porphobilinogen deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3805 | -236 | 4.2 | AAACGTGATCAATTTAACACCT |
| Salmonella typhimurium LT2 | STM3938 | -219 | 4.2 | AAACGTGATCAATTTAACACCT |
| Citrobacter koseri ATCC BAA-895 | CKO_00147 | -220 | 4.2 | AAACGTGATCAATTTAACACCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04304 | -232 | 4.2 | AAACGTGATCAATTTAACACCT |
| Enterobacter sp. 638 | Ent638_3987 | -211 | 4.2 | AAACGTGATCAATCTAACACCT |
| Serratia proteamaculans 568 | Spro_0178 | -223 | 4.2 | AAACGTGATCAATCTAACACCT |
| Edwardsiella tarda EIB202 | ETAE_0118 | -205 | 4.2 | AAACGTGATCAATTTAACACCT |
|
Position: -263
Score: 4.8 Sequence: ATATGTGATCTGAAGCACGCTT
Locus tag: EschericcoliO157_010100001375
|
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| EschericcoliO157_010100001375 | -263 | 4.8 | ATATGTGATCTGAAGCACGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpI | ||||
| Ortholog function: ATP synthase subunit I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3739 | -263 | 4.8 | ATATGTGATCTGAAGCACGCTT |
| Salmonella typhimurium LT2 | STM3872 | -262 | 4.6 | ATGTGTGATCTGGTGCACGCTT |
| -211 | 4.1 | TTTTGTACGATCGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00079 | -262 | 4.7 | ATATGTGATCCGAAGCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04144 | -262 | 4.7 | TTATGTGATCTGATGCACGCTT |
| Enterobacter sp. 638 | Ent638_4125 | -261 | 4.8 | TTTTGTGATCTCGTGCACGCTT |
| Erwinia amylovora ATCC 49946 | EAM_3481 | -264 | 4.4 | ATTTGTGATCGTGGACACGCTT |
| Yersinia pestis KIM | y4142 | -263 | 5.4 | TTATGTGATGTATTTCACGTTT |
| Serratia proteamaculans 568 | Spro_0001 | -265 | 4.4 | TATTGTGAGCAACTACACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4519 | -254 | 5 | TTATGTGAGTCACATCACAGAT |
| Edwardsiella tarda EIB202 | ETAE_3526 | -297 | 3.7 | AATCGTGAAAATATTTAAATTA |
| Proteus mirabilis HI4320 | PMI3057 | -259 | 5 | TTGTGTGTTCTAGATCACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0047 | -265 | 5.7 | TTATGTGATTTAAATCACATTT |
|
Position: -164
Score: 3.6 Sequence: TTGTTTGCTATATCTTAAATTT
Locus tag: EschericcoliO157_010100001585
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| EschericcoliO157_010100001585 | -164 | 3.6 | TTGTTTGCTATATCTTAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tnaA | ||||
| Ortholog function: Tryptophanase (EC 4.1.99.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3708 | -94 | 5 | GATTGTGATTCGATTCACATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02849 | -298 | 4.7 | TTTTGTGATTTTTATCGCGGAT |
| Edwardsiella tarda EIB202 | ETAE_0843 | -231 | 4.1 | ACGCGTGAATTCCATCACAATT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0799 | -167 | 3.6 | TGGTTTAATGTCGATCACCGTA |
|
Position: -56
Score: 4.1 Sequence: ATTTTTGAGCGGAATCGCGTTA
Locus tag: EschericcoliO157_010100001680
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| EschericcoliO157_010100001680 | -56 | 4.1 | ATTTTTGAGCGGAATCGCGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yidA | ||||
| Ortholog function: Phosphatase YidA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3697 | -56 | 4.1 | ATTTTTGAGCGGAATCGCGTTA |
| Salmonella typhimurium LT2 | STM3831 | -56 | 4.1 | TTTTTTGAGCGGAATCGCGTTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00044 | -56 | 4.1 | TTTTTTGAGCGGAATCGCGTTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04101 | -56 | 4.1 | TTTTTTGAGCGGAATCGCGTTA |
|
Position: -58
Score: 4.2 Sequence: AATCGTGACAATACGCACAAAT
Locus tag: EschericcoliO157_010100002310
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| EschericcoliO157_010100002310 | -58 | 4.2 | AATCGTGACAATACGCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yicG | ||||
| Ortholog function: Putative inner membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3646 | -58 | 4.4 | AATCGTGACAATGCGCACAAAT |
| Salmonella typhimurium LT2 | STM3738 | -210 | 3.7 | TTAAATTATCTAAGTCAAAATA |
| -147 | 3.8 | TTTATTGATATTTATAATAAAT | ||
| -58 | 4.9 | AATCGTGATACAGCGCACAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05103 | -58 | 4.7 | AATCGTGATATTACGCACAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03994 | -55 | 4.9 | AATCGTGATCCTGCGCACAAAT |
| Enterobacter sp. 638 | Ent638_0094 | -55 | 3.9 | AATCGTGATATGTTCTGCAAAA |
| Edwardsiella tarda EIB202 | ETAE_0032 | -180 | 3.8 | AAAACTAATCTATATCAAATAT |
|
Position: -323
Score: 4.9 Sequence: TCTTGTGATTCAGATCACAAAG
Position: -279
Score: 5.2 Sequence: AAATGTGACACTACTCACATTT
Position: -162
Score: 5.4 Sequence: TTATGTGATTGATATCACACAA
Locus tag: EschericcoliO157_010100002610
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| EschericcoliO157_010100002610 | -323 | 4.9 | TCTTGTGATTCAGATCACAAAG | |
| -279 | 5.2 | AAATGTGACACTACTCACATTT | ||
| -162 | 5.4 | TTATGTGATTGATATCACACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3599 | -206 | 4.5 | TTTTGTGATGAACGTCACGTCA |
| -162 | 5.4 | TTATGTGATTGATATCACACAA | ||
| -113 | 3.3 | TTCAGTGCCAGATTTCGCAGTA | ||
| Salmonella typhimurium LT2 | STM3685 | -207 | 4.8 | CTTTGTGATCAATATCACATCA |
| -163 | 5.4 | TTATGTGACGCAAATCACATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05054 | -203 | 5.2 | TTTTGTGATCAATATCACATCA |
| -159 | 5 | TCATGTGATCCAAATCACACAA | ||
| -110 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03942 | -208 | 4.9 | TTTTGTGATCATCATCACTAAA |
| -164 | 5.2 | TCATGTGATCCAAATCACATAA | ||
| -115 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Enterobacter sp. 638 | Ent638_0136 | -224 | 3.4 | TATTTTTTTCATACTCTCATTT |
| -205 | 4.8 | TTTTGTGATGGCGATCACCTCA | ||
| -161 | 5.1 | TTGCGTGATGCAGATCACACAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3416 | -229 | 3.3 | CATTGCGAATATCTTTACACTT |
| -210 | 3.9 | CTTCGTGACTCATGTCACTAAA | ||
| -166 | 4.8 | TTAAGTGACCCGCATCACACTT | ||
| -95 | 3.2 | CGTTTTGATCGTGATCCCTCAA | ||
| -34 | 3.5 | ACATGAGATTTGCATCATTAAT | ||
| Yersinia pestis KIM | y4087 | -223 | 4.6 | AGATGTGATCTTAATCAACAAA |
| -179 | 4.5 | TTGTGTGACTTTCGTCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0072 | -195 | 5.2 | AAATGTGATGTATATCACTATA |
| -151 | 4.5 | GTTGGTGATCTGCATCACAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0087 | -230 | 5.1 | TTTTGTGAAGTAAATCACCTAT |
| -186 | 4.5 | TTGTGTGATTTTTGTCACGTTG | ||
|
Position: -324
Score: 4.4 Sequence: ATTTGAGATTCAACTCTCAAAT
Locus tag: EschericcoliO157_010100002755
|
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| EschericcoliO157_010100002755 | -324 | 4.4 | ATTTGAGATTCAACTCTCAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bax | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3570 | -189 | 4.2 | TTTTGCGATAACCCCCACATTT |
| -72 | 4.4 | ATTTGAGATTCAACTCTCAAAT | ||
| Salmonella typhimurium LT2 | STM3663 | -189 | 4.4 | ATTTGCGATAAGCACCACATTT |
| Enterobacter sp. 638 | Ent638_0151 | -219 | 4.2 | ATGAGTGATCTCGCGCAAAATT |
| -189 | 4.1 | ATCTGCGATATCGCACACAATT | ||
| -72 | 4.3 | ATTTGAGATTCCGCTCTCAATT | ||
| Proteus mirabilis HI4320 | PMI2667 | -233 | 4.2 | AAATTTGAGTTAAATAGCATTA |
|
Position: -253
Score: 4.2 Sequence: AAGTGTGCGCTCGCTCGCAAAA
Position: -163
Score: 3.7 Sequence: AAGTAAGATCTCGGTCATAAAT
Locus tag: EschericcoliO157_010100002775
|
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| EschericcoliO157_010100002775 | -253 | 4.2 | AAGTGTGCGCTCGCTCGCAAAA | |
| -163 | 3.7 | AAGTAAGATCTCGGTCATAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylF | ||||
| Ortholog function: Xylose ABC transporter, periplasmic xylose-binding protein XylF | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3566 | -253 | 4.2 | AAGTGTGCGCTCGCTCGCAAAA |
| -163 | 3.7 | AAGTAAGATCTCGGTCATAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05022 | -254 | 4.1 | AAGTGTGCGCCGCCTCGCAAAA |
| -162 | 3.8 | AAGTACGATCTCGGTCATAATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03930 | -234 | 3.8 | AAATACGATCGCCGTCATAATT |
| Enterobacter sp. 638 | Ent638_0155 | -264 | 3.9 | AAACGTGCGCTGGCTCCCAAAA |
| Yersinia pestis KIM | y4056 | -264 | 4.8 | AATTGTGGTGTAGATCTCATAA |
| -160 | 4.2 | AAACATGATCGTTATCATAAAA | ||
| Serratia proteamaculans 568 | Spro_0099 | -259 | 4.4 | AAATGTGCGACAGATCTCATAA |
| -166 | 3.7 | AAGCATGACCGCCATCATAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0098 | -272 | 4.5 | AAATATGACCCGCATCAAAAAA |
|
Position: -224
Score: 3.9 Sequence: ATTTATGACCGAGATCTTACTT
Position: -134
Score: 4.2 Sequence: TTTTGCGAGCGAGCGCACACTT
Locus tag: EschericcoliO157_010100002780
|
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| EschericcoliO157_010100002780 | -224 | 3.9 | ATTTATGACCGAGATCTTACTT | |
| -134 | 4.2 | TTTTGCGAGCGAGCGCACACTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3565 | -224 | 3.9 | ATTTATGACCGAGATCTTACTT |
| -134 | 4.2 | TTTTGCGAGCGAGCGCACACTT | ||
| Salmonella typhimurium LT2 | STM3661 | -260 | 3.9 | TTATGCGAAATTCATCACAGCA |
| -133 | 4.4 | TTTTGAGAGCCAGAGCACATTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05021 | -214 | 4.1 | AATTATGACCGAGATCGTACTT |
| -122 | 4.2 | TTTTGCGAGGCGGCGCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03929 | -234 | 4.1 | TTTTGCGAGCTGGCGCACGTTT |
| Enterobacter sp. 638 | Ent638_0156 | -231 | 3.8 | ATTTATGACCGTGATCTGATTT |
| -135 | 3.9 | TTTTGGGAGCCAGCGCACGTTT | ||
| Yersinia pestis KIM | y4057 | -220 | 4.6 | TTATGAGATCTACACCACAATT |
| Serratia proteamaculans 568 | Spro_0098 | -222 | 3.9 | TTTTATGATGGCGGTCATGCTT |
| -129 | 4.6 | TTATGAGATCTGTCGCACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0097 | -223 | 4.7 | TTTTTTGATGCGGGTCATATTT |
| -135 | 4.4 | TTTTGCGACACAGCGCACATTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2275 | -251 | 4.6 | ATTTATGAGATAAATCACACAA |
|
Position: -143
Score: 4.1 Sequence: TTGTGCGAGCCAGCTCAAACTT
Locus tag: EschericcoliO157_010100003020
|
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| EschericcoliO157_010100003020 | -143 | 4.1 | TTGTGCGAGCCAGCTCAAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: C4-dicarboxylate transport protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3528 | -143 | 4.1 | TTGTGCGAGCCAGCTCAAACTT |
| Salmonella typhimurium LT2 | STM3614 | -145 | 4.1 | TTGTGCGAGCCAGCTCAAACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04970 | -145 | 4 | TTGTGCGAGCCAGCTCAAAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03878 | -143 | 3.9 | TTGTGCGAGTCAGCTCAAAGAT |
| Erwinia amylovora ATCC 49946 | EAM_3380 | -134 | 4.4 | TGAAGTGATTCAGCTCATAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4362 | -157 | 3.8 | TGACGTGATTCAGCTCTTGTTT |
| Edwardsiella tarda EIB202 | ETAE_3379 | -155 | 3.6 | TTATGCGTTTCAGCTCATAGAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3205 | -176 | 4.9 | TTATGTGATCTATATCTTAAAA |
|
Position: -155
Score: 4.5 Sequence: TTATGTGAAGCATTTCATAGAA
Position: -82
Score: 3.5 Sequence: TTCCGCGATTTGTTACACATTG
Locus tag: EschericcoliO157_010100003050
|
||||
| EschericcoliO157_010100003050 | -155 | 4.5 | TTATGTGAAGCATTTCATAGAA | |
| -82 | 3.5 | TTCCGCGATTTGTTACACATTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjE | ||||
| Ortholog function: Inner membrane metabolite transport protein YhjE | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3523 | -155 | 4.5 | TTATGTGAAGCATTTCATAGAA |
| Salmonella typhimurium LT2 | STM3609 | -154 | 4.2 | TTATGTGAAGCATTTCATAGAC |
| Citrobacter koseri ATCC BAA-895 | CKO_04963 | -155 | 4 | TTGTGTGAAGCATTTCATAGAC |
| -94 | 3.7 | TTATTTGAGCGAAATCCCGCTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03874 | -154 | 4.3 | TTGTGTGAAGCATTTCATAGAA |
| Enterobacter sp. 638 | Ent638_3920 | -155 | 4.2 | AACTGTGAAGCATTTCATAGAA |
| Erwinia amylovora ATCC 49946 | EAM_3376 | -134 | 3.6 | AAATATGCCGTATTGAACATTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0769 | -222 | 4.7 | AATTGTGTGCGATCTCACATAT |
|
Position: -38
Score: 3.7 Sequence: CTTTTTTATTGCCTTCAAATAA
Locus tag: EschericcoliO157_010100003085
|
||||
| EschericcoliO157_010100003085 | -38 | 3.7 | CTTTTTTATTGCCTTCAAATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gadB | ||||
| Ortholog function: Glutamate decarboxylase (EC 4.1.1.15) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1493 | -297 | 3.6 | TTTTATAAATGCGTTCAAAATA |
| -158 | 3.3 | TATTGTATTGTTTTTCAATGAA | ||
| -128 | 3.3 | ATTCGCGTAATATCTCACGATA | ||
| Edwardsiella tarda EIB202 | ETAE_2868 | -186 | 3.7 | TAGCGTTATTTTTCTCATCATT |
|
Position: -182
Score: 3.6 Sequence: ATCCGTGCCCCATCTCCCATTT
Locus tag: EschericcoliO157_010100003675
|
||||
| EschericcoliO157_010100003675 | -182 | 3.6 | ATCCGTGCCCCATCTCCCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ugpB | ||||
| Ortholog function: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3453 | -182 | 3.6 | ATCCGTGCCCCATCTCCCATTT |
| Salmonella typhimurium LT2 | STM3557 | -184 | 3.5 | ATCCGTGCCGTAGCTCCCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04874 | -185 | 3.3 | TATTTTTCTGTCATTCGCGCAT |
| -162 | 3.2 | TCATGTTACCTCGCGAGCATAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03813 | -88 | 3.4 | TATTTTTCTGTAATTCGAACAT |
| Enterobacter sp. 638 | Ent638_3856 | -162 | 3.5 | AGTTATTATTCCCGCCACATTA |
| -58 | 3.2 | TCATGTTACCTCGCGAGCATAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3285 | -171 | 3.9 | GTGTGTGATGCCGTTAACACAG |
| Yersinia pestis KIM | y0434 | -72 | 3.5 | AAAACTGATTTATTTCGCTCAT |
| -41 | 4.1 | TTTTTTGATGTGAGCCACACAG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2429 | -145 | 3.5 | TATCGCGATACAGTTCATCACT |
| Edwardsiella tarda EIB202 | ETAE_3321 | -63 | 3.4 | CAATATGTTGTTTATCACTCAA |
|
Position: -171
Score: 4.8 Sequence: AAATTTGAAGTAGCTCACACTT
Locus tag: EschericcoliO157_010100003755
|
||||
| EschericcoliO157_010100003755 | -171 | 4.8 | AAATTTGAAGTAGCTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntK | ||||
| Ortholog function: gluconate kinase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3437 | -132 | 4.8 | AAATTTGAAGTAGCTCACACTT |
|
Position: -116
Score: 4.4 Sequence: TAATGTTATACATATCACTCTA
Locus tag: EschericcoliO157_010100003850
|
||||
| EschericcoliO157_010100003850 | -116 | 4.4 | TAATGTTATACATATCACTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpD | ||||
| Ortholog function: glycerol-3-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3426 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Salmonella typhimurium LT2 | STM3526 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04845 | -116 | 4.5 | TAATGTTATATGTATCACTCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03792 | -119 | 3.7 | ATATGTTACACCCATCACTTCA |
| -58 | 3.7 | TATAGTGAGCGATATCGAGCAT | ||
| Enterobacter sp. 638 | Ent638_3835 | -116 | 4.4 | TTATGTTATCTCTATCACTCAA |
| -55 | 4 | TATTATGAGCGATATCGAACAT | ||
| Erwinia amylovora ATCC 49946 | EAM_3265 | -124 | 4 | AGACGTTATCGGCATCACGCAT |
| Yersinia pestis KIM | y3891 | -129 | 4.4 | AAATGTTACCTCCATCACGCAT |
| Serratia proteamaculans 568 | Spro_4642 | -129 | 3.6 | AACTGTTACCTCTATCACGCCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4141 | -144 | 4.3 | TAATGTGACAACTATCATCATA |
| -124 | 4.4 | TATTGTTAGCTTCATCACGCAT | ||
| Edwardsiella tarda EIB202 | ETAE_3312 | -124 | 4.3 | TTGTGTTATCCGCATCGCGTAA |
| Proteus mirabilis HI4320 | PMI2930 | -129 | 4.4 | AATTGTTATTTATATCACGCAG |
|
Position: -95
Score: 4.7 Sequence: TAGAGTGATATGTATAACATTA
Locus tag: EschericcoliO157_010100003855
|
||||
| EschericcoliO157_010100003855 | -95 | 4.7 | TAGAGTGATATGTATAACATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpE | ||||
| Ortholog function: thiosulfate sulfurtransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3425 | -95 | 4.7 | TAGAGTGATATGTATAACATTA |
| Salmonella typhimurium LT2 | STM3525 | -104 | 4.7 | TAGAGTGATATGTATAACATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04844 | -108 | 4.6 | TAGAGTGATACATATAACATTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03791 | -107 | 4.3 | TGAAGTGATGGGTGTAACATAT |
| Enterobacter sp. 638 | Ent638_3834 | -257 | 3.8 | ATGTTCGATATCGCTCATAATA |
| -196 | 4.6 | TTGAGTGATAGAGATAACATAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3264 | -134 | 3.9 | ATGCGTGATGCCGATAACGTCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0197 | -102 | 3.6 | TAACGTATTACTGATAACAAAT |
|
Position: -142
Score: 4.3 Sequence: AATTGTGACACAGTGCAAATTC
Locus tag: EschericcoliO157_010100003900
|
||||
| EschericcoliO157_010100003900 | -142 | 4.3 | AATTGTGACACAGTGCAAATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malT | ||||
| Ortholog function: transcriptional regulator MalT | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3418 | -142 | 4.3 | AATTGTGACACAGTGCAAATTC |
| Salmonella typhimurium LT2 | STM3515 | -143 | 4.3 | AATTGTGACAGAGTGCAAATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_04840 | -142 | 4.3 | AATTGTGACAGAGTGCAAATTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03788 | -142 | 4.4 | ATTTGTGACATAGAGCAAATTC |
| Enterobacter sp. 638 | Ent638_3831 | -142 | 4.6 | AATTGTGACAGAGTGCAAATTA |
| Yersinia pestis KIM | y3900 | -202 | 4.6 | AATTGTGATCCGTAGCAACTTA |
| Serratia proteamaculans 568 | Spro_4637 | -203 | 4 | AAGTGTGATCAATAGCAATATA |
| Edwardsiella tarda EIB202 | ETAE_3303 | -212 | 3.8 | AAATGTGATCAGCCGCAATTTC |
|
Position: -141
Score: 4.6 Sequence: TTAAGTGGTCGAGATCACATTT
Locus tag: EschericcoliO157_010100003910
|
||||
| EschericcoliO157_010100003910 | -141 | 4.6 | TTAAGTGGTCGAGATCACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malP | ||||
| Ortholog function: maltodextrin phosphorylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3417 | -141 | 4.5 | TTAAGTGGTTGAGATCACATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04838 | -139 | 4 | TTAAGTGGCGGCGATCACACTT |
| Serratia proteamaculans 568 | Spro_4636 | -139 | 4.4 | AAAAGTGCCTGAGATCACAATT |
|
Position: -183
Score: 3.9 Sequence: TAACGTGATCATATCAACAGAA
Locus tag: EschericcoliO157_010100003985
|
||||
| EschericcoliO157_010100003985 | -183 | 3.9 | TAACGTGATCATATCAACAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompR | ||||
| Ortholog function: Two-component system response regulator OmpR | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3405 | -183 | 3.9 | TAACGTGATCATATCAACAGAA |
| Enterobacter sp. 638 | Ent638_3818 | -147 | 3.9 | TTATGTGATGAAATGTGCAGAT |
|
Position: -137
Score: 4 Sequence: TTTCGTGACAGGAATCACGGAG
Locus tag: EschericcoliO157_010100003995
|
||||
| EschericcoliO157_010100003995 | -137 | 4 | TTTCGTGACAGGAATCACGGAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pck | ||||
| Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3403 | -240 | 4.2 | GAATGCGATTCCACTCACAATA |
| -137 | 4 | TTTCGTGACAGGAATCACGGAG | ||
| Salmonella typhimurium LT2 | STM3500 | -241 | 4 | GAATGCGATTACAGTCACATTA |
| -107 | 3.9 | AATCGTGATTTTGTCCAGATAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04825 | -107 | 3.9 | AATCGTGATTTTGTCCAGATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03773 | -242 | 3.7 | GAAAGCGATTACATTCACATTT |
| -138 | 3.7 | CTTCGTGACAGGAGTCACCGTT | ||
| Enterobacter sp. 638 | Ent638_3816 | -241 | 4.1 | GTATGCGATTACATTCACATTA |
| Yersinia pestis KIM | y3918 | -130 | 4.2 | ATTCGTGTTCCATCTCTCATAA |
| -80 | 3.8 | ATATTTGATAGCTATCGCTGTT | ||
| Serratia proteamaculans 568 | Spro_4617 | -80 | 4.1 | ATATTTGATACCTATCGCGGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4106 | -81 | 4 | TTTTATGATTGCTATCGCGGTT |
| Edwardsiella tarda EIB202 | ETAE_3277 | -82 | 3.9 | TTTTTTGATGACTATCTCGGTT |
| Proteus mirabilis HI4320 | PMI3015 | -131 | 4 | ATTTGTGCATTAGTTCTCGTTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0100 | -86 | 3.8 | TTTTTTGATAACTATCGCTGTT |
|
Position: -53
Score: 3.7 Sequence: AAGCGTGTCCGATATCGCACAA
Locus tag: EschericcoliO157_010100004040
|
||||
| EschericcoliO157_010100004040 | -53 | 3.7 | AAGCGTGTCCGATATCGCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nudE | ||||
| Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3397 | -53 | 3.7 | AAGCGTGTCCGATATCGCACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04820 | -54 | 4.1 | AACCGTGCTGTATATCGCACAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03768 | -54 | 4 | AAGCGTGTTGCGTATCGCACAA |
| Enterobacter sp. 638 | Ent638_3810 | -55 | 3.6 | AACCGTGCGTCATATCGCACAA |
| Yersinia pestis KIM | y3923 | -247 | 4.5 | CAATGTGATCAAGTTCTAATAT |
| Serratia proteamaculans 568 | Spro_4612 | -135 | 4.4 | CAATGTGATCAAGATCGGATTT |
| Edwardsiella tarda EIB202 | ETAE_3268 | -116 | 3.6 | AAATATGAGCATCTGCGCACAA |
|
Position: -76
Score: 3.4 Sequence: GAATTTGATTTACATCAATAAG
Locus tag: EschericcoliO157_010100004175
|
||||
| EschericcoliO157_010100004175 | -76 | 3.4 | GAATTTGATTTACATCAATAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nirB | ||||
| Ortholog function: nitrite reductase (NAD(P)H) subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3365 | -124 | 3.2 | AAAATTTATACAAATCAGCAAT |
| -76 | 3.4 | GAATTTGATTTACATCAATAAG | ||
| Salmonella typhimurium LT2 | STM3474 | -76 | 3.4 | GAATTTGATTTACATCAATAAG |
| Citrobacter koseri ATCC BAA-895 | CKO_04789 | -76 | 3.4 | GAATTTGATTTACATCAATAAG |
| Enterobacter sp. 638 | Ent638_3793 | -76 | 3.3 | GTATTTGATTTGCATCAATAAG |
| Yersinia pestis KIM | y3945 | -75 | 3.7 | CAAATTGATTTACATCAAGAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4079 | -186 | 4.2 | AAGCGTGCTATAGATCTCACTT |
| Proteus mirabilis HI4320 | PMI1479 | -129 | 3.5 | TTTTGTGCACTTTATTAACAAT |
|
Position: -204
Score: 4.2 Sequence: TTTTGTGATCTGTTTAAATGTT
Position: -151
Score: 4.2 Sequence: AGAGGTGATTTTGATCACGGAA
Locus tag: EschericcoliO157_010100004185
|
||||
| EschericcoliO157_010100004185 | -204 | 4.2 | TTTTGTGATCTGTTTAAATGTT | |
| -151 | 4.2 | AGAGGTGATTTTGATCACGGAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppiA | ||||
| Ortholog function: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3363 | -204 | 4.2 | TTTTGTGATCTGTTTAAATGTT |
| -151 | 4.2 | AGAGGTGATTTTGATCACGGAA | ||
| Salmonella typhimurium LT2 | STM3472 | -214 | 4.3 | TTTTGTGATGCATTTAAATAAT |
| -161 | 5.1 | TAATGTGATGTTTGTCACATCA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04785 | -215 | 3.7 | TTTAGTGATGTATTTAAATGTT |
| -162 | 5.2 | TAACGTGACATTGATCACATTA | ||
|
Position: -131
Score: 3.9 Sequence: TAATTTGCACGGCGTCACACTT
Locus tag: EschericcoliO157_010100004428
|
||||
| EschericcoliO157_010100004428 | -131 | 3.9 | TAATTTGCACGGCGTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: L-ribulokinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0063 | -131 | 3.9 | TTATTTGCACGGCGTCACACTT |
| Salmonella typhimurium LT2 | STM0103 | -131 | 3.8 | ATATTTGCACAGCGTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03319 | -132 | 3.9 | ATATTTGCACGGCGTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00062 | -130 | 3.9 | ATATTTGCACGGCGTCACACTT |
| Enterobacter sp. 638 | Ent638_0610 | -130 | 3.8 | TTATTTGCACAGCGTCACACTT |
|
Position: -229
Score: 4.4 Sequence: AAGTGTGACGCCGTGCAAATTA
Locus tag: EschericcoliO157_010100004433
|
||||
| EschericcoliO157_010100004433 | -229 | 4.4 | AAGTGTGACGCCGTGCAAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araC | ||||
| Ortholog function: DNA-binding transcriptional dual regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0064 | -229 | 4.4 | AAGTGTGACGCCGTGCAAATAA |
| Salmonella typhimurium LT2 | STM0104 | -231 | 4.5 | AAGTGTGACGCTGTGCAAATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03318 | -230 | 4.4 | AAGTGTGACGCCGTGCAAATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00063 | -229 | 4.4 | AAGTGTGACGCCGTGCAAATAT |
| Enterobacter sp. 638 | Ent638_0611 | -228 | 4.4 | AAGTGTGACGCTGTGCAAATAA |
|
Position: -279
Score: 3.6 Sequence: AATTGAATTAAAAATCACAAAA
Position: -179
Score: 3.3 Sequence: ATTTGTGCATAGTTACAACTTT
Position: -156
Score: 3.7 Sequence: AAACGTTATATATGTCAAGTTG
Position: -139
Score: 3.5 Sequence: AGTTGTTAAAATGTGCACAGTT
Position: -131
Score: 3.8 Sequence: AAATGTGCACAGTTTCATGATT
Position: -119
Score: 3.5 Sequence: TTTCATGATTTCAATCAAAACC
Locus tag: EschericcoliO157_010100004753
|
||||
| EschericcoliO157_010100004753 | -279 | 3.6 | AATTGAATTAAAAATCACAAAA | |
| -179 | 3.3 | ATTTGTGCATAGTTACAACTTT | ||
| -156 | 3.7 | AAACGTTATATATGTCAAGTTG | ||
| -139 | 3.5 | AGTTGTTAAAATGTGCACAGTT | ||
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| -119 | 3.5 | TTTCATGATTTCAATCAAAACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pdhR | ||||
| Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0113 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0151 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03260 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00117 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0659 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0746 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0766 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4012 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3790 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0658 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2047 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -1
Score: 3.4 Sequence: AATGGCTATCGAAATCAAAGTA
Locus tag: EschericcoliO157_010100004793
|
||||
| EschericcoliO157_010100004793 | -1 | 3.4 | AATGGCTATCGAAATCAAAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceF | ||||
| Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0115 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0153 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03258 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00119 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0661 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0748 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0768 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4010 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3788 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0660 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2045 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -147
Score: 5.3 Sequence: ATGTGTGATCGTCATCACAATT
Locus tag: EschericcoliO157_010100004873
|
||||
| EschericcoliO157_010100004873 | -147 | 5.3 | ATGTGTGATCGTCATCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hpt | ||||
| Ortholog function: hypoxanthine phosphoribosyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0125 | -147 | 5.3 | ATGTGTGATCGTCATCACAATT |
| Salmonella typhimurium LT2 | STM0170 | -147 | 5.3 | ATGTGTGATCGTCATCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03242 | -135 | 5.3 | AAGTGTGATCGTCATCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00133 | -134 | 5.4 | AAGTGTGATCGGAATCACAAAT |
| Enterobacter sp. 638 | Ent638_0673 | -180 | 3.6 | AATTTTGATAGCAATTAATTAT |
| -148 | 5.4 | AAGTGTGATCGGAATCACAAAT | ||
| Proteus mirabilis HI4320 | PMI0160 | -154 | 3.6 | TACTGTAATAAGTAACAAAATT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0860 | -144 | 4 | AATTCTGATATGCTTTGCAAAA |
|
Position: -250
Score: 4.2 Sequence: TTTTGTTACTCCGCTTACATAA
Position: -129
Score: 3.9 Sequence: AACTGTGAAACGAAACATATTT
Locus tag: EschericcoliO157_010100006958
|
||||
| EschericcoliO157_010100006958 | -250 | 4.2 | TTTTGTTACTCCGCTTACATAA | |
| -129 | 3.9 | AACTGTGAAACGAAACATATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tsx | ||||
| Ortholog function: Nucleoside-specific channel-forming protein Tsx precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0411 | -250 | 3.7 | TTTTGTTACTCTGCTTACATCA |
| -129 | 3.9 | AACTGTGAAACGAAACATATTT | ||
| Salmonella typhimurium LT2 | STM0413 | -129 | 4 | ATATGTGAAACAAGACATATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02750 | -131 | 3.7 | ATCTGTGAAACAAGACATATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00363 | -131 | 3.8 | TTATGTGAAACAACACGTATTT |
| Enterobacter sp. 638 | Ent638_0879 | -124 | 4.1 | ATATGTGAAACAACACATATTT |
| Erwinia amylovora ATCC 49946 | EAM_2589 | -218 | 5.3 | ATTTGTGATAAAAATCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3796 | -172 | 5.5 | TTATGTGATTAAAATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_2935 | -245 | 4.6 | TAATTTGATGAGAATCTCAATT |
|
Position: -68
Score: 4.9 Sequence: TAATGTGATCGGTAGCACGTTT
Locus tag: EschericcoliO157_010100007496
|
||||
| EschericcoliO157_010100007496 | -68 | 4.9 | TAATGTGATCGGTAGCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yohJ | ||||
| Ortholog function: LrgA family protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2141 | -68 | 4.9 | TAATGTGATCGGTAGCACGTTT |
| Salmonella typhimurium LT2 | STM2181 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00648 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02582 | -68 | 5 | TGATGTGATCGGTAGCACATTT |
| Enterobacter sp. 638 | Ent638_2744 | -68 | 4.7 | TGATGTGATCCGTAGCACGTTT |
| Yersinia pestis KIM | y2654 | -32 | 4.7 | TAGTGTGATGGGTAGCACAGAA |
| Serratia proteamaculans 568 | Spro_1570 | -62 | 4.3 | ATTTGTGGCGGAGGTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2828 | -69 | 4.5 | ATTCGTGATCTGTGGCACGTAA |
| Edwardsiella tarda EIB202 | ETAE_1164 | -68 | 4.9 | TGATGTGATCAGTAGCACATTT |
| Proteus mirabilis HI4320 | PMI0645 | -71 | 5.2 | TATTGTGATCCATAGCACACTT |
|
Position: -78
Score: 5.1 Sequence: TAATGAGATTCAGATCACATAT
Locus tag: EschericcoliO157_010100007511
|
||||
| EschericcoliO157_010100007511 | -78 | 5.1 | TAATGAGATTCAGATCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cdd | ||||
| Ortholog function: cytidine deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2143 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 5.1 | TAATGAGATTCAGATCACATAT | ||
| Salmonella typhimurium LT2 | STM2183 | -128 | 4.2 | ATTTGCGATACGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTAGATCACATAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00646 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTGGATCACATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02584 | -78 | 4.4 | GAATGAGATATTCATCACATAT |
| Enterobacter sp. 638 | Ent638_2746 | -127 | 4.2 | ATTTGCGATGCGTCGCGCAATT |
| -77 | 4.9 | TAATGAGAACTGGATCACATAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2202 | -124 | 3.9 | ACTTGCGATAAGTCTCTCATTT |
| -104 | 4.1 | TTTGGTGATGCATTTCATTTAT | ||
| -74 | 4.7 | TAGAGCGATTTAGATCACATAT | ||
| Yersinia pestis KIM | y2657 | -75 | 5 | TAATGAGATATAAATCACAATT |
| Serratia proteamaculans 568 | Spro_1568 | -127 | 4.1 | ACTTGCGATACATCTCGCAATT |
| -77 | 4.5 | TAAAGAGATTTACATCACACTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2830 | -130 | 4.6 | AATTGAGATACATCTCGCATTT |
| -79 | 4.5 | TAAAGAGATTCCGATCACAATT | ||
| Edwardsiella tarda EIB202 | ETAE_1162 | -76 | 4.9 | AAAAGTGATTATTATCACAAAT |
| Proteus mirabilis HI4320 | PMI0643 | -132 | 4.4 | ATTTGAGATGTATCTCCCAATT |
| -82 | 5.1 | AAATATGATTTTAATCACATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1547 | -75 | 4.7 | CTATATGATATTTATCACATTA |
|
Position: -111
Score: 4.8 Sequence: ATTTGTGAATCCTTTCACAGTT
Locus tag: EschericcoliO157_010100007526
|
||||
| EschericcoliO157_010100007526 | -111 | 4.8 | ATTTGTGAATCCTTTCACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeiT | ||||
| Ortholog function: predicted oxidoreductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2146 | -112 | 4.8 | ATTTGTGAATCTTTTCACAGTT |
| Salmonella typhimurium LT2 | STM2186 | -201 | 3.5 | ATTTATTATCCCTTTAAAATTG |
| -168 | 4.1 | TATTATGATATAAGGAACAAAT | ||
| -121 | 4.9 | TTTTGTGAATTCTTTCACAGAA | ||
|
Position: -95
Score: 3.9 Sequence: TGCTGTGACTCGATTCACGAAG
Position: -10
Score: 3.4 Sequence: GGTAGTGAATATGATCACCATT
Locus tag: EschericcoliO157_010100007561
|
||||
| EschericcoliO157_010100007561 | -95 | 3.9 | TGCTGTGACTCGATTCACGAAG | |
| -10 | 3.4 | GGTAGTGAATATGATCACCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galS | ||||
| Ortholog function: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2151 | -146 | 3.5 | GATAACGATCTGGATCACATTC |
| -95 | 3.9 | TGCTGTGACTCGATTCACGAAG | ||
| Salmonella typhimurium LT2 | STM2191 | -154 | 3.5 | GATAACGATCTGGATCACATTC |
| -103 | 3.5 | CCCTGTGATGTTTCTCACGCAG | ||
| -38 | 3.3 | ATTTGTGAGCATTTTTGAACTC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00640 | -157 | 3.5 | GATAACGATCTGGATCACATTC |
| -106 | 3.4 | CCCTGTGACCTTACTCACGTAG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02589 | -160 | 3.3 | GATAACGATCTCGATCACAATC |
| -109 | 3.4 | CCGTGTGACCTCACTCACGCAG | ||
| -33 | 3.6 | TGACGTGCTGTAATTCTCTTAA | ||
| Enterobacter sp. 638 | Ent638_2751 | -160 | 3.4 | GATAACGATCTGGATCACAATC |
| -109 | 4.1 | CTGTGTGAGCTTCTTCACGTAG | ||
| Erwinia amylovora ATCC 49946 | EAM_2208 | -110 | 3.4 | GGCTGTGAGGTTTCTCACGTAG |
| Serratia proteamaculans 568 | Spro_1562 | -135 | 3.4 | AATTGAGATCTGGCGCAGGTAG |
| -84 | 3.5 | TCCTGTGACGGGATTCACGCAG | ||
|
Position: -101
Score: 3.8 Sequence: TTATGTGCGCCGCCTCACGCAC
Locus tag: EschericcoliO157_010100007576
|
||||
| EschericcoliO157_010100007576 | -101 | 3.8 | TTATGTGCGCCGCCTCACGCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: folE | ||||
| Ortholog function: GTP cyclohydrolase I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2153 | -101 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Salmonella typhimurium LT2 | STM2193 | -101 | 4 | TTATGTGCGCTACCTCACGCAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00638 | -98 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02591 | -84 | 3.5 | TTCTGTGCGCCACCTCACGCAC |
| Enterobacter sp. 638 | Ent638_2753 | -84 | 3.9 | TTATGTGCGCCACCTCACGCAC |
| Serratia proteamaculans 568 | Spro_1560 | -121 | 4.3 | AATCTTGACCGGGTTCACGTTA |
| Proteus mirabilis HI4320 | PMI0639 | -86 | 4.9 | TAATGTGATTCAGCTCATCTAA |
|
Position: -178
Score: 4.3 Sequence: AATTGTGCAGCACATCAAACTT
Locus tag: EschericcoliO157_010100007686
|
||||
| EschericcoliO157_010100007686 | -178 | 4.3 | AATTGTGCAGCACATCAAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruB | ||||
| Ortholog function: PTS system, fructose-specific IIA/FPr component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2169 | -178 | 4.3 | AATTGTGCAGCACATCAAACTT |
| Salmonella typhimurium LT2 | STM2206 | -177 | 4.6 | AAATGTGCTTCACCTCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00613 | -50 | 4.1 | AAGTGTGCTTTATCTCTAAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02600 | -177 | 3.5 | AAGTGTGCAGTACCTCTAAGTT |
| Enterobacter sp. 638 | Ent638_2763 | -178 | 4.3 | AAATGTGCTGCACTTCTAAATT |
| Erwinia amylovora ATCC 49946 | EAM_2223 | -179 | 4.4 | AAATGTGCTGGCTGTCAAAAAT |
| Yersinia pestis KIM | y2887 | -178 | 4.1 | AAATGTGCGGAATGTCAAAAAT |
| Serratia proteamaculans 568 | Spro_3230 | -177 | 4 | AAGTGTGCGTGAGGTCAAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2729 | -180 | 4.1 | AAATGTGCGTGATGTCAAAATT |
| Edwardsiella tarda EIB202 | ETAE_2303 | -199 | 4.1 | AAATGTGCTGAAGGTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1992 | -180 | 4.7 | AAATGTGAGTAATCTCAAAAAA |
|
Position: -219
Score: 4.6 Sequence: AAGTTTGATGTGCTGCACAATT
Locus tag: EschericcoliO157_010100007691
|
||||
| EschericcoliO157_010100007691 | -219 | 4.6 | AAGTTTGATGTGCTGCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: setB | ||||
| Ortholog function: Sugar efflux transporter B | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2170 | -211 | 4.6 | AAGTTTGATGTGCTGCACAATT |
| Salmonella typhimurium LT2 | STM2207 | -213 | 4.6 | TTTTTTGAGGTGAAGCACATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00612 | -212 | 3.7 | AATTTAGAGATAAAGCACACTT |
| Enterobacter sp. 638 | Ent638_2764 | -208 | 3.9 | AATTTAGAAGTGCAGCACATTT |
|
Position: -131
Score: 4.1 Sequence: TTTTGTGCGTTAGTCCACAGAT
Locus tag: EschericcoliO157_010100007741
|
||||
| EschericcoliO157_010100007741 | -131 | 4.1 | TTTTGTGCGTTAGTCCACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spr | ||||
| Ortholog function: predicted peptidase, outer membrane lipoprotein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2175 | -130 | 4.1 | TTTTGTGCGTTAGTCCACAGAT |
| Salmonella typhimurium LT2 | STM2214 | -128 | 3.7 | ATTTGTGCGTTCCGCCACAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02608 | -292 | 3.6 | TAGGGTAATCTCGTTCTCGTTT |
| -234 | 4.2 | AATTGTGCGTGACTGCACAAAT | ||
| Enterobacter sp. 638 | Ent638_2771 | -250 | 3.6 | AATCGCTTTGTCTATCACAATT |
| Yersinia pestis KIM | y2908 | -128 | 3.7 | GAATGTGCGTTCATGCACATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2735 | -159 | 3.9 | TAATGTGCATTCTGGCACACTT |
| Edwardsiella tarda EIB202 | ETAE_2298 | -131 | 4.4 | AAGTGTGTTCTGCTGCACAATT |
| Proteus mirabilis HI4320 | PMI0831 | -129 | 4.2 | TTACGTGCTTTAGAGCACGTTT |
|
Position: -200
Score: 3.6 Sequence: AAGGTTGAGTTAGATCGCAGAA
Position: -158
Score: 3.7 Sequence: AAACGTGACCACGCCCGCAGAT
Locus tag: EschericcoliO157_010100007781
|
||||
| EschericcoliO157_010100007781 | -200 | 3.6 | AAGGTTGAGTTAGATCGCAGAA | |
| -158 | 3.7 | AAACGTGACCACGCCCGCAGAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yejG | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2181 | -158 | 3.7 | AAACGTGACCACGCCCGCAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02614 | -204 | 3.8 | AAAGTTGTTTTGGATCACAGAA |
| Erwinia amylovora ATCC 49946 | EAM_2233 | -177 | 3.6 | AAATGAGCATTACTTCTCAAAA |
| Yersinia pestis KIM | y2914 | -238 | 4.4 | AAATGGGATCTGAATCCCAAAT |
| Serratia proteamaculans 568 | Spro_3250 | -214 | 4.2 | AAATGCGAGCTGAGTCGCAAAA |
| -121 | 4.1 | GCTTGTGATGTTTTTTACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2740 | -178 | 4 | ATTCGTGATCAGTTTGGCATTA |
| -101 | 3.8 | TGTTGTTTTTTTGTTCACGAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2865 | -185 | 4.1 | AAATGAGAGATTGATCTCACTT |
| -183 | 3.6 | ATGAGAGATTGATCTCACTTTT | ||
| -141 | 3.8 | TAATGTAATACTATAAACACAA | ||
|
Position: -54
Score: 4.1 Sequence: AGTTGTGAATTTGCACAAATTT
Locus tag: EschericcoliO157_010100008411
|
||||
| EschericcoliO157_010100008411 | -54 | 4.1 | AGTTGTGAATTTGCACAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfbV | ||||
| Ortholog function: putative cytoplasmic protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2295 | -263 | 3.6 | ATTTATGATTAACATCATGCAC |
| -54 | 4.1 | AGTTGTGAATTTGCACAAATTT | ||
| Erwinia amylovora ATCC 49946 | EAM_2300 | -44 | 4 | TTGTGTGTTTTTTTTAAAATTT |
| Edwardsiella tarda EIB202 | ETAE_2396 | -34 | 3.6 | TTTTTTAACTCTTATCGAATAA |
| Proteus mirabilis HI4320 | PMI1770 | -290 | 3.7 | ATTAATGATACGCATCATGCTT |
| -260 | 3.6 | AAACTTGATGCTAATTATAGTT | ||
|
Position: -116
Score: 4.1 Sequence: TTGTGTGACCCAGATCGATATT
Locus tag: EschericcoliO157_010100009436
|
||||
| EschericcoliO157_010100009436 | -116 | 4.1 | TTGTGTGACCCAGATCGATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glk | ||||
| Ortholog function: glucokinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2388 | -116 | 4.1 | TTGTGTGACCCAGATCGATATT |
| Salmonella typhimurium LT2 | STM2403 | -116 | 3.9 | TTCTGTGATGAAGATCTATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_00412 | -116 | 4.5 | TTATGTGATGCAGATCGATATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02738 | -117 | 4.4 | AAATGTGACCTGTGTCGCTAAA |
| Enterobacter sp. 638 | Ent638_2921 | -116 | 3.8 | TTCTGTGACGAAGATCGATTAT |
| Yersinia pestis KIM | y1505 | -113 | 4.7 | TTATGAGATGTCAGTCACAAAA |
| Serratia proteamaculans 568 | Spro_3407 | -116 | 4.8 | TTTTGTGATCCGGATCGCTAAT |
|
Position: -109
Score: 4.1 Sequence: AATATCGATCTGGGTCACACAA
Locus tag: EschericcoliO157_010100009441
|
||||
| EschericcoliO157_010100009441 | -109 | 4.1 | AATATCGATCTGGGTCACACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfeO | ||||
| Ortholog function: Chloride channel protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2389 | -109 | 4.1 | AATATCGATCTGGGTCACACAA |
| Salmonella typhimurium LT2 | STM2404 | -109 | 3.9 | AATATAGATCTTCATCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00411 | -134 | 4.4 | AATATCGATCTGCATCACATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02739 | -192 | 4.3 | TTTAGCGACACAGGTCACATTT |
| Enterobacter sp. 638 | Ent638_2922 | -111 | 3.7 | ATAATCGATCTTCGTCACAGAA |
| Serratia proteamaculans 568 | Spro_3408 | -249 | 4.7 | ATTAGCGATCCGGATCACAAAA |
|
Position: -305
Score: 4 Sequence: TAATGTTAGCACATTTACATAA
Position: -153
Score: 4.1 Sequence: AAATTTAACCTGCCTCATATTT
Locus tag: EschericcoliO157_010100009466
|
||||
| EschericcoliO157_010100009466 | -305 | 4 | TAATGTTAGCACATTTACATAA | |
| -153 | 4.1 | AAATTTAACCTGCCTCATATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: Nucleoside permease NupC | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2393 | -183 | 4 | TAATGTTAGCACATTTACATAA |
| -84 | 3.8 | TAGTGTGTGTCAGATCTCGTTT | ||
| -31 | 4.1 | AAATTTAACCTGCCTCATATTT | ||
|
Position: -55
Score: 5.3 Sequence: TTATGTGATCTAAATCACTTTT
Locus tag: EschericcoliO157_010100009767
|
||||
| EschericcoliO157_010100009767 | -55 | 5.3 | TTATGTGATCTAAATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aaeR | ||||
| Ortholog function: LysR-family transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3243 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Salmonella typhimurium LT2 | STM3367 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04651 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03652 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Enterobacter sp. 638 | Ent638_3680 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Erwinia amylovora ATCC 49946 | EAM_3128 | -37 | 5.3 | AAATGTGATCTAAATCACTTTT |
| Yersinia pestis KIM | y0180 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Serratia proteamaculans 568 | Spro_4393 | -37 | 4.9 | ATCTGTGATCTAAATCACTTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0276 | -37 | 5.1 | TAGTGTGATCTAAATCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_3129 | -131 | 4.5 | ATCTGTGACGCAAATCACTTTT |
|
Position: -98
Score: 5.4 Sequence: AAAAGTGATTTAGATCACATAA
Locus tag: EschericcoliO157_010100009772
|
||||
| EschericcoliO157_010100009772 | -98 | 5.4 | AAAAGTGATTTAGATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhcR | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3242 | -167 | 5.4 | AAAAGTGATTTAGATCACATAA |
| Salmonella typhimurium LT2 | STM3366 | -166 | 5.4 | AAAAGTGATTTAGATCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04650 | -168 | 5.4 | AAAAGTGATTTAGATCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03651 | -116 | 5.2 | AAAAGTGATTTAGATCACACAT |
| -63 | 3.7 | TATTGTTAGCTACATAATAAAC | ||
| Enterobacter sp. 638 | Ent638_3679 | -165 | 5.4 | AAAAGTGATTTAGATCACATAT |
| Yersinia pestis KIM | y0179 | -269 | 5.2 | AAAAGTGATTTAGATCACACAT |
| Serratia proteamaculans 568 | Spro_4392 | -293 | 5.1 | AAAAGTGATTTAGATCACAGAT |
| -89 | 3.8 | ATTTGTGGTGCGTGTCAGCTAA | ||
|
Position: -9
Score: 5.1 Sequence: TTTTGTGATATGGGTCACGAAA
Locus tag: EschericcoliO157_010100009792
|
||||
| EschericcoliO157_010100009792 | -9 | 5.1 | TTTTGTGATATGGGTCACGAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhcN | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3238 | -60 | 5.1 | TTTTGTGATATGGGTCACGAAA |
| Salmonella typhimurium LT2 | STM3361 | -60 | 5 | TTTTGTGATGAGGGTCACGAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04644 | -60 | 5 | TTTTGTGATGAGGGTCACGAAA |
| Enterobacter sp. 638 | Ent638_3673 | -58 | 5 | TTTTGTGATGAGGGTCACGAAA |
|
Position: -115
Score: 4.6 Sequence: TTTAGTGAAGCAGATCGCATTA
Locus tag: EschericcoliO157_010100009897
|
||||
| EschericcoliO157_010100009897 | -115 | 4.6 | TTTAGTGAAGCAGATCGCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanA | ||||
| Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3225 | -115 | 4.6 | TTTAGTGAAGCAGATCGCATTA |
| Salmonella typhimurium LT2 | STM3339 | -113 | 4.4 | TTTAGTGAAGCAGATCGCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04629 | -116 | 4.2 | TTTAGTGAAGTAGATCGCACTC |
| Enterobacter sp. 638 | Ent638_3661 | -112 | 4.6 | TTTAGTGAAGCAGATCGCATTA |
| Edwardsiella tarda EIB202 | ETAE_1381 | -141 | 4.5 | TTTAGTGAACTAGATCGCACAA |
|
Position: -292
Score: 4.2 Sequence: AATTTTGCGCTAAAGCACATTT
Locus tag: EschericcoliO157_010100009932
|
||||
| EschericcoliO157_010100009932 | -292 | 4.2 | AATTTTGCGCTAAAGCACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: glutamate synthase, large subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3212 | -199 | 4.2 | AATTTTGCGCTAAAGCACATTT |
| Salmonella typhimurium LT2 | STM3330 | -288 | 3.7 | ATCTGTGCTACAGCACACTTTT |
| Enterobacter sp. 638 | Ent638_3656 | -298 | 3.9 | GATAGTGAGTCAGATCACACTC |
| Edwardsiella tarda EIB202 | ETAE_0527 | -278 | 4.9 | AACTGTGATGCAGCCCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4009 | -241 | 4 | ATATTTGACCTGATTTATATTT |
|
Position: -91
Score: 3.7 Sequence: ATTTGTTACATGAATCAGTTAA
Position: -69
Score: 4 Sequence: ATGTGTGATGCGTACCATTTTT
Locus tag: EschericcoliO157_010100009947
|
||||
| EschericcoliO157_010100009947 | -91 | 3.7 | ATTTGTTACATGAATCAGTTAA | |
| -69 | 4 | ATGTGTGATGCGTACCATTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: elbB | ||||
| Ortholog function: sigma cross-reacting protein 27A (SCRP-27A) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3209 | -91 | 3.7 | ATTTGTTACATGAATCAGTTAA |
| -69 | 4 | ATGTGTGATGCGTACCATTTTT | ||
| Salmonella typhimurium LT2 | STM3327 | -91 | 3.9 | ATTTGTTACATGAATCATTTAA |
| -69 | 3.6 | ATGTGTGAAGCGTAGCATTTTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04612 | -92 | 3.7 | TTTTGTTACATGAATCAGTTAA |
| -70 | 3.6 | ATGTGTGAAGCGCAGCATTTTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03618 | -93 | 3.6 | ATTTGTTACATGAATCAGTAAA |
| -71 | 3.8 | ATATGTGAAGCATAGCGAGTTA | ||
| Serratia proteamaculans 568 | Spro_4341 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0316 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT |
| Proteus mirabilis HI4320 | PMI3679 | -174 | 4.1 | TTTTTTGATTATCATTACATAG |
|
Position: -253
Score: 4.6 Sequence: TATAGTGATCCACGCCACATTT
Position: -139
Score: 3.5 Sequence: TTATTTTACAAAAAACACACTA
Locus tag: EschericcoliO157_010100010167
|
||||
| EschericcoliO157_010100010167 | -253 | 4.6 | TATAGTGATCCACGCCACATTT | |
| -139 | 3.5 | TTATTTTACAAAAAACACACTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: Argininosuccinate synthase (EC 6.3.4.5) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3172 | -253 | 4.6 | TATAGTGATCCACGCCACATTT |
| Erwinia amylovora ATCC 49946 | EAM_0139 | -121 | 3.5 | AATAGTGAATAAAAATACAATA |
| Serratia proteamaculans 568 | Spro_4779 | -167 | 4 | TATTGTGAATAAAAATACAATA |
| Edwardsiella tarda EIB202 | ETAE_3480 | -160 | 3.4 | AATTATGAATAAAAATACAATA |
| Proteus mirabilis HI4320 | PMI3239 | -57 | 3.6 | TTTTTTGAATAAAAATACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4742 | -59 | 3.6 | TTTTTTGAATAAAAATACATTA |
|
Position: -99
Score: 4.4 Sequence: TACTTTGAGCCGGTTCACACTT
Locus tag: EschericcoliO157_010100010222
|
||||
| EschericcoliO157_010100010222 | -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deaD | ||||
| Ortholog function: ATP-independent RNA helicase | ||||
| Salmonella typhimurium LT2 | STM3280.S | -154 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04559 | -103 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -48 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03570 | -154 | 3.8 | TTTTTTGCTTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACAT | ||
| Enterobacter sp. 638 | Ent638_3599 | -154 | 4.1 | TCTTATGATTGCCATCACCTTA |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Erwinia amylovora ATCC 49946 | EAM_3065 | -99 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Yersinia pestis KIM | y0696 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Serratia proteamaculans 568 | Spro_0495 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0718 | -96 | 4.4 | CAATTTGAGCCGGTTCACACTT |
| Edwardsiella tarda EIB202 | ETAE_0411 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Proteus mirabilis HI4320 | PMI3424 | -80 | 5 | TAATTTGAGCCAGTTCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4523 | -95 | 5 | TAATTTGAGCCAGTTCACATTT |
|
Position: -82
Score: 4.7 Sequence: ATTTGTGAGTGGTCGCACATAT
Locus tag: EschericcoliO157_010100010492
|
||||
| EschericcoliO157_010100010492 | -82 | 4.7 | ATTTGTGAGTGGTCGCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tdcA | ||||
| Ortholog function: Threonine catabolic operon transcriptional activator TdcA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3118 | -225 | 4 | TGATGTTATCGCCATAAAATAT |
| -82 | 4.7 | ATTTGTGAGTGGTCGCACATAT | ||
| Salmonella typhimurium LT2 | STM3245 | -188 | 3.9 | TTTTTTGATTGAAATCAGGCTA |
| -83 | 4.7 | ATTTGTGAGTGGTCGCACATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04518 | -225 | 4.3 | ATATGTTATCGCCATAAAATAT |
| -187 | 3.9 | TTTTTTGACAAAAATCATGATA | ||
| -82 | 4.6 | ATTTGTGAGTAGTCGCACATAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02296 | -82 | 4.6 | CTTTGTGAGAGCTCTCACATAA |
| -54 | 3.7 | AATTGCGATTTGTTACACTTTC | ||
| Enterobacter sp. 638 | Ent638_3565 | -82 | 3.9 | ATTTGTGAGTAACAGCACATCC |
|
Position: -228
Score: 4.6 Sequence: TTTTGTGATCTGCCGCAAATAG
Locus tag: EschericcoliO157_010100010527
|
||||
| EschericcoliO157_010100010527 | -228 | 4.6 | TTTTGTGATCTGCCGCAAATAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhaO | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3110 | -228 | 4.6 | TTTTGTGATCTGCCGCAAATAG |
| Salmonella typhimurium LT2 | STM3239 | -230 | 4.5 | TGTTGTGATACGCGTCAAATAG |
| Citrobacter koseri ATCC BAA-895 | CKO_04511 | -180 | 4.7 | TGTTGTGATCTGCTTCAAGAAT |
|
Position: -152
Score: 5.1 Sequence: ATTTGTGATGGCTCTCACCTTT
Locus tag: EschericcoliO157_010100010607
|
||||
| EschericcoliO157_010100010607 | -152 | 5.1 | ATTTGTGATGGCTCTCACCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuT | ||||
| Ortholog function: Hexuronate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3093 | -274 | 4.2 | TTTCGTGAGTTAGATCAATAAA |
| -152 | 5.1 | ATTTGTGATGGCTCTCACCTTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04495 | -250 | 5.2 | ATTTGTGATGTCACTCACCTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03521 | -263 | 4.4 | TTTTGTGACAGCTCTCAACTTT |
| Enterobacter sp. 638 | Ent638_3547 | -261 | 4.2 | TTTCGTGAGTTAGATCAATAAA |
| -139 | 5.2 | TTTTGTGATGTCACTCACCTTT | ||
| Serratia proteamaculans 568 | Spro_4322 | -180 | 4.8 | TTTTGTGATATCACTCAACTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0644 | -208 | 4.8 | TTTTGTGATATCACTCAACTTT |
|
Position: -232
Score: 4.5 Sequence: AAAGGTGAGAGCCATCACAAAT
Position: -110
Score: 4.4 Sequence: TTTATTGATCTAACTCACGAAA
Locus tag: EschericcoliO157_010100010612
|
||||
| EschericcoliO157_010100010612 | -232 | 4.5 | AAAGGTGAGAGCCATCACAAAT | |
| -110 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3092 | -232 | 4.5 | AAAGGTGAGAGCCATCACAAAT |
| -110 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04494 | -169 | 4.6 | AAAGGTGAGTGACATCACAAAT |
| -47 | 4.3 | TTTATTGATCCAACTCACGAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03520 | -251 | 3.8 | AAAGTTGAGAGCTGTCACAAAA |
| -129 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Enterobacter sp. 638 | Ent638_3546 | -231 | 4.6 | AAAGGTGAGTGACATCACAAAA |
| -109 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0645 | -229 | 4.1 | AAAGTTGAGTGATATCACAAAA |
| -109 | 3.8 | TTTTGCGATCATGACCTCACAA | ||
| -86 | 3.7 | TCCTGTGAGATATTGCGCATAA | ||
|
Position: -129
Score: 4.3 Sequence: TTTCGTGATCCAGTTAAAGTAA
Locus tag: EschericcoliO157_010100010712
|
||||
| EschericcoliO157_010100010712 | -129 | 4.3 | TTTCGTGATCCAGTTAAAGTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ebgA | ||||
| Ortholog function: cryptic beta-D-galactosidase, alpha subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3076 | -129 | 4.3 | TTTCGTGATCCAGTTAAAGTAA |
| Serratia proteamaculans 568 | Spro_1973 | -95 | 3.6 | TTTTGTGATCCCGTCGGCATTG |
| -63 | 3.5 | TTCTGTGAATTTTACTAAATAT | ||
|
Position: -104
Score: 5 Sequence: AATTGCGATCTAAATCAAATTA
Locus tag: EschericcoliO157_010100010747
|
||||
| EschericcoliO157_010100010747 | -104 | 5 | AATTGCGATCTAAATCAAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aer | ||||
| Ortholog function: aerotaxis sensor receptor, senses cellular redox state or proton motive force | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3072 | -104 | 5 | AATTGCGATCTAAATCAAATTA |
| Salmonella typhimurium LT2 | STM3217 | -220 | 3.6 | AAAGGTGAGCCAGGGCAGATTT |
| -105 | 4 | AATTGCGATCCAGAGCAATTTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04485 | -290 | 3.9 | ATTGGTGATGTTTTGCGCAATG |
| -105 | 5 | AATTGCGATCTAAATCAAATTT | ||
| Enterobacter sp. 638 | Ent638_3527 | -106 | 4.5 | AATTGCGATCTGGATCAATTTT |
|
Position: -124
Score: 3.8 Sequence: AAGTGTGATCGGGGACAATATA
Locus tag: EschericcoliO157_010100010902
|
||||
| EschericcoliO157_010100010902 | -124 | 3.8 | AAGTGTGATCGGGGACAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glgS | ||||
| Ortholog function: glycogen synthesis protein GlgS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3049 | -225 | 3.4 | AATAGTTTCCTTGCTTACATTT |
| -203 | 3.4 | ATCTGTGTTAATAATAACACAG | ||
| -124 | 3.8 | AAGTGTGATCGGGGACAATATA | ||
| Salmonella typhimurium LT2 | STM3197 | -222 | 3.3 | TCGCGTGATAATTTTCATGCTT |
| -178 | 4.2 | TCATGTGACCCATATCTCCTTA | ||
| -117 | 4.2 | TATTGTGATTTTGCGCATTAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04437 | -118 | 3.4 | AAGTGTGATGTCAGGCAACTGA |
|
Position: -166
Score: 5.2 Sequence: AAATGTTATCCATATCACAATT
Position: -116
Score: 3.8 Sequence: TTATTTGCCACAGGTAACAAAA
Locus tag: EschericcoliO157_010100011407
|
||||
| EschericcoliO157_010100011407 | -166 | 5.2 | AAATGTTATCCATATCACAATT | |
| -116 | 3.8 | TTATTTGCCACAGGTAACAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupG | ||||
| Ortholog function: Nucleoside permease NupG | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2964 | -166 | 5.2 | AAATGTTATCCACATCACAATT |
| -116 | 3.8 | TTATTTGCCACAGGTAACAAAA | ||
| Salmonella typhimurium LT2 | STM3113 | -166 | 3.9 | AAGTGTTAACTCCGTCACCCTT |
| -116 | 3.6 | ATATTTGTCACAGGTAACAAAA | ||
| -50 | 3.6 | AAATGTGCCTTTTAAAACATTC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04339 | -166 | 3.9 | AAGTGTTAACTCCATCACTCTT |
| -116 | 3.6 | ATATTTGTCACAGGTAACAAAA | ||
| -50 | 3.6 | AAATGTGCCTTTTAAAACATTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03396 | -49 | 4.2 | TAATGTTATTTTAAAAACATAA |
| Enterobacter sp. 638 | Ent638_3369 | -163 | 4.5 | AAACGTTATTTGCATCACAATC |
| -114 | 3.7 | TTTTTTGCGGGAGGTAACAAAA | ||
|
Position: -125
Score: 4 Sequence: TTTTGTTACCTGCCTCTAACTT
Locus tag: EschericcoliO157_010100011452
|
||||
| EschericcoliO157_010100011452 | -125 | 4 | TTTTGTTACCTGCCTCTAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ansB | ||||
| Ortholog function: periplasmic L-asparaginase II | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2957 | -125 | 4 | TTTTGTTACCTGCCTCTAACTT |
| Salmonella typhimurium LT2 | STM3106 | -125 | 4.3 | TTTTGTTATCCATCTCTAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04332 | -125 | 3.6 | TTTTGATATCCATCTCTAAAAA |
| Proteus mirabilis HI4320 | PMI0708 | -81 | 3.6 | ATTCGTTCTATTTATCACGGAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1616 | -76 | 3.8 | AAGTCTGGTATGTATCACAGAT |
|
Position: -209
Score: 4.3 Sequence: TTTGGTGACATGTGTCACGTTT
Locus tag: EschericcoliO157_010100011757
|
||||
| EschericcoliO157_010100011757 | -209 | 4.3 | TTTGGTGACATGTGTCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serA | ||||
| Ortholog function: D-3-phosphoglycerate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2913 | -210 | 4.1 | TTTGGTGACATGTGTCACGCTT |
| Salmonella typhimurium LT2 | STM3062 | -217 | 4.5 | TTTGGTGACATGTATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03348 | -214 | 4.6 | TTTGGTGACTTCTGTCACATTT |
| Enterobacter sp. 638 | Ent638_3332 | -215 | 4.1 | TTCGGTGACTTGTATCACGTTT |
| Yersinia pestis KIM | y3301 | -126 | 4.8 | TTTGGTGATATATATCACATTC |
| Serratia proteamaculans 568 | Spro_3923 | -215 | 4.4 | TTTGGTGACATATGTCACATTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3905 | -214 | 3.9 | TTTGGTACTTAATATCACATTT |
| Proteus mirabilis HI4320 | PMI2031 | -210 | 4 | TTCAGTGATATATATCACACGA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3605 | -207 | 4.4 | TTTAGTGATATATTTCATATCT |
| -178 | 4.2 | TTATTTGATCTAAATCCTAATT | ||
| -105 | 4.4 | TTATGTGATGGGAATAGCAATC | ||
|
Position: -81
Score: 3.7 Sequence: TATTGAGATTTTGTTCTTAATC
Locus tag: EschericcoliO157_010100011974
|
||||
| EschericcoliO157_010100011974 | -81 | 3.7 | TATTGAGATTTTGTTCTTAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: creA | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4397 | -81 | 3.7 | TATTGAGATTTTGTTCTTAATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04852 | -42 | 3.8 | TTTTTTAATAATGGTAACAATA |
| Serratia proteamaculans 568 | Spro_0680 | -75 | 3.8 | TTCTGTGACCTAAAACATAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0561 | -111 | 4 | CTTTGTGAAATTATTCTAATAA |
|
Position: -149
Score: 4.6 Sequence: TTATTTGAACCAGATCGCATTA
Position: -96
Score: 4.6 Sequence: AATTGTGATGTATATCGAAGTG
Locus tag: EschericcoliO157_010100012064
|
||||
| EschericcoliO157_010100012064 | -149 | 4.6 | TTATTTGAACCAGATCGCATTA | |
| -96 | 4.6 | AATTGTGATGTATATCGAAGTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC | ||||
| Ortholog function: 2-deoxyribose-5-phosphate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4381 | -149 | 4.6 | TTATTTGAACCAGATCGCATTA |
| -96 | 4.5 | AATTGTGATGTGTATCGAAGTG | ||
| Salmonella typhimurium LT2 | STM4567 | -133 | 4.9 | TAATTTGATTCAGATCTCATTA |
| -80 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03410 | -134 | 4.2 | TTATTTGAAGTGGATCTCGTTA |
| -81 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04837 | -158 | 5.2 | ATTTGTGATTTTAATCACGTTA |
| -105 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Enterobacter sp. 638 | Ent638_0541 | -151 | 4.6 | AAATTTGAAGTGGATCTCATTA |
| -98 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0615 | -233 | 4.6 | TGATGTGATAATTCTAACATTA |
| Yersinia pestis KIM | y3743 | -169 | 3.7 | TGCGGTGAGATGGATCTCAATT |
| Serratia proteamaculans 568 | Spro_0660 | -262 | 4.6 | ATTTGTGAACGATATCGCGTTA |
| -240 | 5.5 | TTTTGTGATGGTCTTCACATAT | ||
| -188 | 3.8 | TAGTGTGACTGTGAACGCGAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0727 | -282 | 4.4 | AAGTGTGAATGAATGCACAAAA |
| Proteus mirabilis HI4320 | PMI2416 | -267 | 4.4 | ATATGTGAGTTACTTCGCAACT |
| -135 | 5.6 | TTTTGTGATTCTGATCACAATT | ||
| -83 | 4.5 | TATTGTGACAGAAAGCACATCT | ||
|
Position: -231
Score: 4.6 Sequence: GGTTGTGATCATCATCACATAA
Locus tag: EschericcoliO157_010100012249
|
||||
| EschericcoliO157_010100012249 | -231 | 4.6 | GGTTGTGATCATCATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cstA2 | ||||
| Ortholog function: Carbon starvation protein A paralog | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4354 | -231 | 5.7 | ATATGTGATATGAATCACATAT |
| Salmonella typhimurium LT2 | STM4532 | -229 | 5.4 | TATCGTGATCTCAATCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03443 | -228 | 5.2 | ATTAGTGATCTCAATCACATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04776 | -231 | 5.2 | TATTGTGAGCTTAATCACACAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1187 | -57 | 3.7 | TATTTTTCTACAGCTAACAAAA |
| Proteus mirabilis HI4320 | PMI0142 | -279 | 3.6 | ATTTTTTATGTAATTAATAGTT |
| -234 | 5.2 | ATTTGTTATCTCGATCACAAAA | ||
|
Position: -186
Score: 4.5 Sequence: TCTTGTGATGTGGTTAACCAAT
Locus tag: EschericcoliO157_010100012464
|
||||
| EschericcoliO157_010100012464 | -186 | 4.5 | TCTTGTGATGTGGTTAACCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4322 | -271 | 3.8 | TGTTGCGATGAATGTCACATCC |
| -186 | 4.5 | TCTTGTGATGTGGTTAACCAAT | ||
| Salmonella typhimurium LT2 | STM3135 | -205 | 4.3 | AAAATTGACACAGATCAAATAA |
| -155 | 4.6 | ATTTGTGATTTGGTTAGCCAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00609 | -115 | 3.9 | GATTGTGAGCTGGATCAATCAA |
| Enterobacter sp. 638 | Ent638_2767 | -116 | 3.9 | TTCTGTGAGTTGGATCAATCAA |
| Serratia proteamaculans 568 | Spro_3238 | -167 | 3.9 | AACCGTGAAGTGGATCAACCAA |
| -48 | 4.1 | AATCTTGATCACCACCACAATA | ||
| Edwardsiella tarda EIB202 | ETAE_2289 | -188 | 4.2 | AATCGTGAGGCGGATCAACCAA |
|
Position: -104
Score: 3.8 Sequence: AATTGTGATCTTCGCTGCGTTT
Locus tag: EschericcoliO157_010100012834
|
||||
| EschericcoliO157_010100012834 | -104 | 3.8 | AATTGTGATCTTCGCTGCGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treB | ||||
| Ortholog function: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4240 | -101 | 3.8 | AATTGTGATCTTCGCTGCGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03571 | -156 | 3.8 | ATTTGTGATCTTCGCTGCGTTT |
| Enterobacter sp. 638 | Ent638_0439 | -106 | 4 | TATTGTGATCTTCACCCGATTT |
| Serratia proteamaculans 568 | Spro_0529 | -124 | 3.8 | TTTTGTGATCCTCGCCCCAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3288 | -127 | 4.3 | CAATGTGATCTTCAACCCATTT |
|
Position: -126
Score: 3.6 Sequence: AACAGTGAAGAATGCCACAATT
Locus tag: EschericcoliO157_010100012989
|
||||
| EschericcoliO157_010100012989 | -126 | 3.6 | AACAGTGAAGAATGCCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysQ | ||||
| Ortholog function: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4214 | -126 | 3.6 | AACAGTGAAGAATGCCACAATT |
| Salmonella typhimurium LT2 | STM4404 | -144 | 3.9 | TTTTTTGCGAGTGTTCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03615 | -178 | 4.1 | TTTTTAGATCTGAAACACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04608 | -178 | 4.1 | TTTTATGAGCGATAGCACAGAA |
| -126 | 3.7 | AAATGTGAATCTTGCCAGAAAA | ||
| -57 | 3.9 | TGATGCGATATAAATAAAACAA | ||
| Enterobacter sp. 638 | Ent638_0393 | -167 | 3.9 | TTTTTCGATCCAAGCCACAAAA |
| Erwinia amylovora ATCC 49946 | EAM_0455 | -158 | 4.2 | AAATGTGACACAGCACGAATAA |
| Serratia proteamaculans 568 | Spro_0454 | -180 | 3.7 | AACTGTGAAGTGTGGCAGAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3601 | -258 | 3.7 | TAAAGTGATTATCGTCTCTAAA |
|
Position: -118
Score: 3.8 Sequence: AACTGTGATAGTGTCATCATTT
Position: -85
Score: 3.8 Sequence: AATTGTGGCATTCTTCACTGTT
Locus tag: EschericcoliO157_010100012994
|
||||
| EschericcoliO157_010100012994 | -118 | 3.8 | AACTGTGATAGTGTCATCATTT | |
| -85 | 3.8 | AATTGTGGCATTCTTCACTGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cpdB | ||||
| Ortholog function: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4213 | -118 | 3.8 | AACTGTGATAGTGTCATCATTT |
| -85 | 3.8 | AATTGTGGCATTCTTCACTGTT | ||
| Salmonella typhimurium LT2 | STM4403 | -145 | 3.7 | TTCTGTGAACACTCGCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03616 | -25 | 4.2 | TTTTGTGTTTCAGATCTAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04607 | -156 | 3.8 | TTGTTTTATTTATATCGCATCA |
| -87 | 3.7 | TTTTCTGGCAAGATTCACATTT | ||
| -35 | 4.2 | TTCTGTGCTATCGCTCATAAAA | ||
| Enterobacter sp. 638 | Ent638_0392 | -34 | 4 | TTTTGTGGCTTGGATCGAAAAA |
| Yersinia pestis KIM | y0653 | -148 | 3.6 | AACTGTGAGCGTCTACGCGTTA |
| -116 | 3.8 | TTTTCTGCCAAACTTCACACTT | ||
| -63 | 4.4 | TTTTGCGATACATATCGAATAT | ||
| Serratia proteamaculans 568 | Spro_0453 | -95 | 3.8 | TTTTCTGCCACACTTCACAGTT |
|
Position: -198
Score: 4.7 Sequence: TTTTGTGAGCTGTTTCGCGTTA
Locus tag: EschericcoliO157_010100013019
|
||||
| EschericcoliO157_010100013019 | -198 | 4.7 | TTTTGTGAGCTGTTTCGCGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cycA2 | ||||
| Ortholog function: D-alanine/D-serine/glycine permease | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4208 | -198 | 4.7 | TTTTGTGAGCTGTTTCGCGTTA |
| Salmonella typhimurium LT2 | STM4398 | -193 | 5.1 | TTTTGTGAGCTAATTCGCATTA |
| -170 | 3.9 | CAAAGTGATATAACACTCATTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03624 | -199 | 4.4 | TTTTGTGAGCTAATTCGCGTTG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04601 | -192 | 4.7 | TTTTGTGAGCTATTTCGCGTTA |
| -169 | 3.8 | ATGAGTGATATAACACTCACTT | ||
| Enterobacter sp. 638 | Ent638_0378 | -201 | 4.2 | TTTTGTGAGCTGTTTTGCATTG |
| Yersinia pestis KIM | y2447 | -199 | 4.5 | CACTGTGATGTACTTAACAAAA |
| -118 | 3.7 | TAATATTAAATTATTCGCAAAT | ||
| Proteus mirabilis HI4320 | PMI1614 | -102 | 4.4 | TTCTGAGATTTGTGTCACAATA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1965 | -102 | 4.6 | TATAGTAATCTGTGTCACAATA |
|
Position: -152
Score: 3.6 Sequence: AAGTGTAATTTCCGTCCCCATA
Locus tag: EschericcoliO157_010100013563
|
||||
| EschericcoliO157_010100013563 | -152 | 3.6 | AAGTGTAATTTCCGTCCCCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybeD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0631 | -94 | 3.6 | AAGTGTAATTTCCGTCCCCATA |
| Salmonella typhimurium LT2 | STM0636 | -93 | 4.2 | AAGTGTGATTTTCGTCCCCATA |
| -35 | 3.9 | AGTTGTTATTTTTTTTACGTAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02527 | -91 | 4.4 | AAGTGTGATTTCCATCCCCATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00663 | -97 | 4.4 | AAGTGTGATTTCCATCCCCATA |
| Enterobacter sp. 638 | Ent638_1166 | -90 | 4.4 | AAGTGTGATTTCCATCCCCATA |
| Yersinia pestis KIM | y1174 | -146 | 4.2 | TATTGTGATTAATCTTATATTG |
|
Position: -144
Score: 3.8 Sequence: GAATGTGACGCAAATCACTTCA
Locus tag: EschericcoliO157_010100013683
|
||||
| EschericcoliO157_010100013683 | -144 | 3.8 | GAATGTGACGCAAATCACTTCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rnk | ||||
| Ortholog function: Regulator of nucleoside diphosphate kinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0610 | -140 | 3.8 | GAATGTGACGCAAATCACTTCA |
| Salmonella typhimurium LT2 | STM0616 | -141 | 3.8 | GAATGTGAACTAAATCACTTCA |
| Citrobacter koseri ATCC BAA-895 | CKO_02549 | -141 | 3.9 | GAATGTGAGCTAAATCACTTCA |
| Enterobacter sp. 638 | Ent638_1148 | -187 | 4.1 | AAATCTGAGAACGATCACGTTT |
| -140 | 3.8 | GAATGTGACATTCATCACTTCA | ||
| Serratia proteamaculans 568 | Spro_4382 | -170 | 3.7 | CTTCGTGATCGGGATCTCTTTC |
| -67 | 3.8 | TTTTGTGCTGTTTTTCCGAATT | ||
| Edwardsiella tarda EIB202 | ETAE_0492 | -145 | 4.4 | ATTTGTGAGCCAGCTCTCTTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4046 | -127 | 3.7 | GTTCGTGATCATGATCTCTTTA |
|
Position: -217
Score: 3.1 Sequence: ATTTTTCATTGATTGCAGAAAT
Position: -36
Score: 3.2 Sequence: AGTTGCAATTCGTGGCAAAAAT
Locus tag: EschericcoliO157_010100013838
|
||||
| EschericcoliO157_010100013838 | -217 | 3.1 | ATTTTTCATTGATTGCAGAAAT | |
| -36 | 3.2 | AGTTGCAATTCGTGGCAAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepA | ||||
| Ortholog function: iron-enterobactin outer membrane transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0584 | -36 | 3.2 | AGTTGCAATTCGTGGCAAAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00602 | -239 | 3.4 | TAGCGTGACTTTTTTAATTAAT |
| Enterobacter sp. 638 | Ent638_1116 | -228 | 3.6 | TATTTTGTTTCAGGACAAATTT |
|
Position: -20
Score: 3.3 Sequence: GTTTGTCATCAGTCTCGAATAT
Locus tag: EschericcoliO157_010100013843
|
||||
| EschericcoliO157_010100013843 | -20 | 3.3 | GTTTGTCATCAGTCTCGAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: entD | ||||
| Ortholog function: 4'-phosphopantetheinyl transferase (EC 2.7.8.-) [enterobactin] siderophore | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0583 | -36 | 3.2 | AGTTGCAATTCGTGGCAAAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00601 | -239 | 3.4 | TAGCGTGACTTTTTTAATTAAT |
| Enterobacter sp. 638 | Ent638_1115 | -228 | 3.6 | TATTTTGTTTCAGGACAAATTT |
|
Position: -105
Score: 4.7 Sequence: CTGTGTGATATTCATCACCTTA
Locus tag: EschericcoliO157_010100014108
|
||||
| EschericcoliO157_010100014108 | -105 | 4.7 | CTGTGTGATATTCATCACCTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fdrA | ||||
| Ortholog function: membrane protein FdrA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0518 | -213 | 3.8 | TTATTTGATAATCCGCTCACTT |
| -105 | 4.7 | CTGTGTGATATTCATCACCTTA | ||
| Salmonella typhimurium LT2 | STM0529 | -120 | 4.4 | TGATGTGACGTTAATCACTCTA |
| Proteus mirabilis HI4320 | PMI2202 | -191 | 4.2 | AACTGTGACTTTAATCACTCTA |
|
Position: -97
Score: 4.8 Sequence: CTATGTGATCTTTATCACACAG
Locus tag: EschericcoliO157_010100014473
|
||||
| EschericcoliO157_010100014473 | -97 | 4.8 | CTATGTGATCTTTATCACACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: maa | ||||
| Ortholog function: maltose O-acetyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0459 | -97 | 4.8 | CTATGTGATCTTTATCACACAG |
| Salmonella typhimurium LT2 | STM0472 | -97 | 4.7 | AACAGTGATATAGATCACATAG |
| Citrobacter koseri ATCC BAA-895 | CKO_02692 | -101 | 4.6 | TCTCGTGATTTAGATCACATCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00440 | -100 | 4.7 | CTTTGTGATAGACATCACATCA |
| Enterobacter sp. 638 | Ent638_0939 | -98 | 4.3 | TGCTGTGACTCTGATCACATCA |
|
Position: -101
Score: 4.4 Sequence: ATGCGTGATGTGTGCCACAATT
Locus tag: EschericcoliO157_010100014498
|
||||
| EschericcoliO157_010100014498 | -101 | 4.4 | ATGCGTGATGTGTGCCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybaY | ||||
| Ortholog function: Glycoprotein-polysaccharide metabolism | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0453 | -101 | 4.3 | ATGCGTGATGTGTGCCACACTT |
| Salmonella typhimurium LT2 | STM0465 | -100 | 3.9 | ATGAGTGACATGTGCCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02705 | -102 | 4 | ATAAGTGAGATATGCCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00416 | -99 | 3.8 | ATCTGAGATCTGTGCCACACTT |
| Enterobacter sp. 638 | Ent638_0921 | -96 | 4.3 | ATAAGTGATATGTGCCACACTT |
|
Position: -138
Score: 4.2 Sequence: AATTGTGGCACACATCACGCAT
Locus tag: EschericcoliO157_010100014503
|
||||
| EschericcoliO157_010100014503 | -138 | 4.2 | AATTGTGGCACACATCACGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tesB | ||||
| Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0452 | -138 | 3.9 | AAGTGTGGCACACATCACGCAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02706 | -135 | 3.9 | AAGTGTGGCATATCTCACTTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00415 | -139 | 3.8 | AAGTGTGGCACAGATCTCAGAT |
| Enterobacter sp. 638 | Ent638_0920 | -131 | 4 | AAGTGTGGCACATATCACTTAT |
| Yersinia pestis KIM | y1043 | -153 | 3.6 | TAGCGTGCTAATTATAGCATAA |
| Serratia proteamaculans 568 | Spro_1111 | -54 | 3.6 | TGCCGTGATATTCCGCACACTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1162 | -154 | 3.7 | TAGTATGATTCAATAAACACAA |
|
Position: -155
Score: 4.8 Sequence: TTGTGTGATGCAAGCCACATTT
Position: -113
Score: 3.8 Sequence: CATTGCGATGTGTGTCACTGAA
Locus tag: EschericcoliO157_010100015417
|
||||
| EschericcoliO157_010100015417 | -155 | 4.8 | TTGTGTGATGCAAGCCACATTT | |
| -113 | 3.8 | CATTGCGATGTGTGTCACTGAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0907 | -155 | 4.8 | TTGTGTGATGCAAGCCACATTT |
| Salmonella typhimurium LT2 | STM0977 | -142 | 4.2 | TTGTGTGACGCATGCCGCATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02165 | -171 | 4.6 | TTGTGTGACGTAGCGCGCATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00935 | -145 | 3.7 | TTGTGTGACGGCGGCCGCGTTT |
| Enterobacter sp. 638 | Ent638_1427 | -119 | 4.4 | TTGTGTGACGGTGGACACATTT |
| Yersinia pestis KIM | y2784 | -39 | 3.3 | TATAACGATGGCAATCTCAGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2594 | -78 | 3.5 | AAGTATGACGGGTATAAAAATG |
| Proteus mirabilis HI4320 | PMI0711 | -119 | 3.5 | TATTTTTGTGTGCTACACATAA |
|
Position: -78
Score: 3.8 Sequence: AGATATGATCTATATCAATTTC
Locus tag: EschericcoliO157_010100015432
|
||||
| EschericcoliO157_010100015432 | -78 | 3.8 | AGATATGATCTATATCAATTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: focA | ||||
| Ortholog function: formate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0904 | -156 | 3.6 | TATTTTTATTTGGATAATCAAA |
| -78 | 3.8 | AGATATGATCTATATCAATTTC | ||
| Salmonella typhimurium LT2 | STM0974 | -78 | 4.4 | AGATATGATCTATATCAAATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_02167 | -198 | 3.6 | TATTTTTATTTGGATAATCAAA |
| -120 | 4.4 | AGATATGATCTATATCAAATTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00932 | -121 | 3.8 | AGATATGATCTATATCAATTTC |
| Enterobacter sp. 638 | Ent638_1424 | -78 | 3.8 | AGATATGATCTATATCAATTTC |
| Yersinia pestis KIM | y2789 | -84 | 4 | CAATATGATCCATATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2596 | -79 | 4.5 | CAATATGATCCACATCAAATTT |
| Proteus mirabilis HI4320 | PMI0706 | -188 | 4 | TTTTTTGATAAAATTTAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1614 | -88 | 4.7 | AATTATGATCTATATCAAATTC |
|
Position: -29
Score: 4.2 Sequence: AAATTTGAACTTCCTCACGGTT
Locus tag: EschericcoliO157_010100015462
|
||||
| EschericcoliO157_010100015462 | -29 | 4.2 | AAATTTGAACTTCCTCACGGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycaD | ||||
| Ortholog function: Hypothetical MFS-type transporter protein ycaD | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0898 | -29 | 4.2 | AAATTTGAACTTCCTCACGGTT |
| Salmonella typhimurium LT2 | STM0968 | -29 | 4.2 | AAATTTGAACTTCCTCACGGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02171 | -29 | 4.2 | AAATTTGAACTTCCTCACGGTT |
|
Position: -164
Score: 4 Sequence: AAATTTGAAGCAGTTAACGCTA
Locus tag: EschericcoliO157_010100015597
|
||||
| EschericcoliO157_010100015597 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpS | ||||
| Ortholog function: ATP-dependent Clp protease adaptor protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0881 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| Salmonella typhimurium LT2 | STM0944 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -104 | 3.6 | AGATGTTAGTTATCTATCAATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02199 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -135 | 4.2 | TAATGTGACAGATGTCGCGGAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00914 | -167 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -77 | 4.3 | ATTTGTGATGAGCATAACCTCT | ||
| Enterobacter sp. 638 | Ent638_1398 | -161 | 3.9 | ATTTTTGAAGCAGTTAACGCTA |
| -132 | 3.8 | GAATGTGACAGATATCGCGGAT | ||
| Erwinia amylovora ATCC 49946 | EAM_1320 | -161 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -132 | 4.5 | TTTTGTGATAGAGGTCGCTATT | ||
| Serratia proteamaculans 568 | Spro_1673 | -176 | 3.6 | AAGTTTGAAGCAGGTAACGCTA |
| Edwardsiella tarda EIB202 | ETAE_2208 | -164 | 3.8 | AAGTTTGAGGCAGTTAACGCAA |
| -144 | 3.6 | AATTGTGCGGCAGTGCGCTTTT | ||
| Proteus mirabilis HI4320 | PMI0689 | -268 | 3.7 | TGTCTTTATTTACTTAACATTA |
| -148 | 4.1 | AACTTTGATGTAGCTAACGCTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1593 | -170 | 4.3 | AAGTTTGATATAGATAACGATA |
|
Position: -124
Score: 4.4 Sequence: AGATGTGTACGAAATCACATTT
Locus tag: EschericcoliO157_010100015987
|
||||
| EschericcoliO157_010100015987 | -124 | 4.4 | AGATGTGTACGAAATCACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiT | ||||
| Ortholog function: ABC transporter ATP-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0820 | -124 | 4.4 | AGATGTGTACGAAATCACATTT |
| Salmonella typhimurium LT2 | STM0838 | -124 | 4 | AGATGTGTACGAAATCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02298 | -148 | 4.4 | AGATGTGTACGAAATCACATTT |
| Enterobacter sp. 638 | Ent638_1311 | -125 | 4.4 | AGATGTGTACGAAATCACATTT |
| Yersinia pestis KIM | y2677 | -295 | 3.9 | TATCGTTATACCCGTCATACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3010 | -41 | 4 | TAATGCGCGCCAAATCACATTC |
| Edwardsiella tarda EIB202 | ETAE_2518 | -40 | 4.8 | TAATGTGAACAAAATCACGTTA |
|
Position: -116
Score: 4.7 Sequence: AAATGTGATTTCGTACACATCT
Locus tag: EschericcoliO157_010100015992
|
||||
| EschericcoliO157_010100015992 | -116 | 4.7 | AAATGTGATTTCGTACACATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiS | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0819 | -116 | 4.7 | AAATGTGATTTCGTACACATCT |
| Salmonella typhimurium LT2 | STM0837 | -116 | 4.4 | AAACGTGATTTCGTACACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_02299 | -202 | 3.8 | ATATGTGACAAACCGCTTATTA |
| -116 | 4.7 | AAATGTGATTTCGTACACATCT | ||
| Enterobacter sp. 638 | Ent638_1310 | -119 | 4.7 | AAATGTGATTTCGTACACATCT |
|
Position: -123
Score: 4.5 Sequence: TTTTGTGACGCAGCGCATAAAT
Locus tag: EschericcoliO157_010100016152
|
||||
| EschericcoliO157_010100016152 | -123 | 4.5 | TTTTGTGACGCAGCGCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiH | ||||
| Ortholog function: putative transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0796 | -123 | 4.5 | TTTTGTGACGCAGCGCATAAAT |
| Salmonella typhimurium LT2 | STM0819 | -124 | 4.7 | TTTTGTGATGCGGCGCATAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02331 | -124 | 4.5 | TTTTGTGACATACCGCATAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00824 | -224 | 3.6 | AAATGAAACGGTATTCAAAAAA |
| -118 | 4.7 | AATTGTTAAGCCCATCACAAAT | ||
| Enterobacter sp. 638 | Ent638_1287 | -126 | 4.4 | TTTTGTGACACGGCGCATAAAA |
| Serratia proteamaculans 568 | Spro_1330 | -146 | 4.6 | TTAAGTGACGCAGAGCACAATA |
| Proteus mirabilis HI4320 | PMI0619 | -160 | 3.6 | AATTTTTAAATAAATCATGTTT |
|
Position: -98
Score: 3.9 Sequence: TAGTGTAGTCGGCGTCACAAAA
Locus tag: EschericcoliO157_010100016177
|
||||
| EschericcoliO157_010100016177 | -98 | 3.9 | TAGTGTAGTCGGCGTCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybhQ | ||||
| Ortholog function: putative inner membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0791 | -98 | 3.9 | TAGTGTAGTCGGCGTCACAAAA |
| Salmonella typhimurium LT2 | STM0814 | -98 | 3.8 | TAGTGTAGTCGTCGTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_02336 | -153 | 3.8 | TAGTGTAGTCGTCGTCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00819 | -97 | 3.8 | TAGTGTAGTAGACGTCACAAAA |
| Enterobacter sp. 638 | Ent638_1282 | -98 | 3.9 | AAGTGTAGTCGGCGTCACAAAA |
|
Position: -56
Score: 4.2 Sequence: TTTTGTGACGCCGACTACACTA
Locus tag: EschericcoliO157_010100016182
|
||||
| EschericcoliO157_010100016182 | -56 | 4.2 | TTTTGTGACGCCGACTACACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybhP | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0790 | -56 | 4.2 | TTTTGTGACGCCGACTACACTA |
| Salmonella typhimurium LT2 | STM0813 | -56 | 4 | TTTTGTGACGACGACTACACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_02337 | -56 | 4 | TTTTGTGACGACGACTACACTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00818 | -56 | 4.2 | TTTTGTGACGTCTACTACACTA |
| Enterobacter sp. 638 | Ent638_1281 | -57 | 4.2 | TTTTGTGACGCCGACTACACTT |
|
Position: -41
Score: 5.7 Sequence: TTATGTGATTTGTATCACATAA
Locus tag: EschericcoliO157_010100016470
|
||||
| EschericcoliO157_010100016470 | -41 | 5.7 | TTATGTGATTTGTATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: azuC | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4663 | -101 | 5.7 | TTATGTGATTTGTATCACATAA |
| -71 | 4.9 | TTTTGTGATGGTTGTCATATTA | ||
| Enterobacter sp. 638 | Ent638_2481 | -53 | 5.4 | AACTGTGATGTGCATCACATAA |
| -48 | 3.2 | TGATGTGCATCACATAATCATT | ||
| -23 | 4.7 | TTTTGTGACTCTGGTCATATTA | ||
|
Position: -349
Score: 4.2 Sequence: CGATGTGATATTGCTCTCCTAT
Locus tag: EschericcoliO157_010100016490
|
||||
| EschericcoliO157_010100016490 | -349 | 4.2 | CGATGTGATATTGCTCTCCTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araF | ||||
| Ortholog function: L-arabinose-binding periplasmic protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1901 | -163 | 4.2 | CGATGTGATATTGCTCTCCTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_01050 | -164 | 4 | CGGTGTGATGCCGCTCTCCTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02396 | -161 | 4 | CGATGTGATAATGCTCTCGTAT |
| -72 | 3.6 | TGTTTTGATGACGATTAAATTG | ||
| Enterobacter sp. 638 | Ent638_2476 | -162 | 3.7 | CGGTGTGATGGCGCTCTCTTAT |
| Erwinia amylovora ATCC 49946 | EAM_1698 | -251 | 4.3 | TTATGTGATGGCCTTCATATGT |
| Yersinia pestis KIM | y2096 | -283 | 4.3 | TTTTGTGATGTCAGTCAAAAGT |
| Serratia proteamaculans 568 | Spro_2245 | -251 | 3.8 | TTTTGTGACGGCTGTCATAAGT |
|
Position: -98
Score: 4.2 Sequence: CTCCGTGATGCTCGTCACAAAT
Locus tag: EschericcoliO157_010100017150
|
||||
| EschericcoliO157_010100017150 | -98 | 4.2 | CTCCGTGATGCTCGTCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeaQ | ||||
| Ortholog function: Transglycosylase associated protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1795 | -98 | 4.2 | CTCCGTGATGCTCGTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_01818 | -97 | 4.9 | AAAAGTGACATTTATCACAAAT |
| Enterobacter sp. 638 | Ent638_1658 | -245 | 3.7 | CAATGTGAGCAATGTCGTACTA |
| -101 | 4.8 | CACTGTGATACCTATCACAAAT | ||
|
Position: -187
Score: 5.2 Sequence: AAATGTGATTTTCATCACGATT
Locus tag: EschericcoliO157_010100017265
|
||||
| EschericcoliO157_010100017265 | -187 | 5.2 | AAATGTGATTTTCATCACGATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msrB | ||||
| Ortholog function: methionine sulfoxide reductase B | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1778 | -137 | 5.2 | AAATGTGATTTTCATCACGATT |
| Salmonella typhimurium LT2 | STM1291 | -107 | 4.7 | TAATGTGACATCAGTCACGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01799 | -107 | 4.9 | AAACGTGATTCCGATCACGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01198 | -135 | 5.1 | AAACGTGATTTAAGTCACAATT |
| Enterobacter sp. 638 | Ent638_1676 | -137 | 5.2 | ATATGTGAGAAAGATCACAATT |
| Erwinia amylovora ATCC 49946 | EAM_1930 | -137 | 5.2 | AATGGTGATCTGCATCACAATT |
| Yersinia pestis KIM | y2164 | -85 | 5.1 | ATTTGCGATTTTTATCACATTT |
| Serratia proteamaculans 568 | Spro_2727 | -143 | 5.7 | ATATGTGATCGGTATCACATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2343 | -135 | 5.6 | TTATGTGATACACATCACAATT |
| Edwardsiella tarda EIB202 | ETAE_1484 | -91 | 4.9 | GTTTGTGATGCTCATCACAAAA |
| Proteus mirabilis HI4320 | PMI1503 | -137 | 5.3 | TTATGTGAAATGTATCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2557 | -267 | 4.6 | ATATGCGAGTCACATCACAATA |
|
Position: -106
Score: 3.5 Sequence: TTTCTTGCTTACCGTCACATTC
Locus tag: EschericcoliO157_010100017380
|
||||
| EschericcoliO157_010100017380 | -106 | 3.5 | TTTCTTGCTTACCGTCACATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gdhA | ||||
| Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1761 | -106 | 3.5 | TTTCTTGCTTACCGTCACATTC |
| Salmonella typhimurium LT2 | STM1299 | -107 | 3.6 | TTTCTTGCTTACCGTCACATTG |
| -55 | 3.6 | TATTCTGATAAAACGCAAATAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01789 | -107 | 3.4 | TTTCTTGCTTACCGTCACACTG |
| Enterobacter sp. 638 | Ent638_1685 | -110 | 3.3 | AATTTTCACTTGCCTCGCAAAG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0051 | -234 | 3.6 | TTTTGTTATATAACAAAAACTT |
| Proteus mirabilis HI4320 | PMI3008 | -195 | 3.4 | AATCCTGATTTTATTAGCCTTT |
| -88 | 3.5 | AAACAATATCAACCTCACATAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0122 | -92 | 3.5 | AAACACAACTTACCTCACATTT |
|
Position: -201
Score: 3.7 Sequence: AAATGTGAAGAGGGTCATAACC
Locus tag: EschericcoliO157_010100017515
|
||||
| EschericcoliO157_010100017515 | -201 | 3.7 | AAATGTGAAGAGGGTCATAACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chbB | ||||
| Ortholog function: N,N'-diacetylchitobiose-specific PTS system , EIIB component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1738 | -201 | 3.7 | AAATGTGAAGAGGGTCATAACC |
| Citrobacter koseri ATCC BAA-895 | CKO_01763 | -188 | 4.1 | AAATGTGAGAGGGGTCATAACA |
| Enterobacter sp. 638 | Ent638_1706 | -129 | 3.9 | AATTTTGATTAACCGCGAATTA |
|
Position: -106
Score: 4.3 Sequence: AGGTGTGACACACCTCGCACTT
Position: -64
Score: 4 Sequence: TATCGTGATGCGCATCACTTCC
Locus tag: EschericcoliO157_010100017715
|
||||
| EschericcoliO157_010100017715 | -106 | 4.3 | AGGTGTGACACACCTCGCACTT | |
| -64 | 4 | TATCGTGATGCGCATCACTTCC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroH | ||||
| Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1704 | -106 | 4.3 | AGGTGTGACACACCTCGCACTT |
| -64 | 4 | TATCGTGATGCGCATCACTTCC | ||
| Salmonella typhimurium LT2 | STM1347 | -106 | 4.3 | AGGTGTGACACGCCTCGCACTT |
| -64 | 4 | TATCGTGATGCCCATCACTTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01728 | -115 | 4.3 | AGGTGTGAAACGCCTCGCATTT |
| -64 | 4.3 | TATTGTGATGCCCATCACTTCC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02162 | -63 | 4 | TATCGTGATGCGCATCACTTCC |
| Enterobacter sp. 638 | Ent638_1743 | -126 | 3.6 | AGTTATGATCGCTTTCACTCTC |
| -62 | 3.6 | TAAGGTGATGCCCATCACTTCC | ||
| Yersinia pestis KIM | y1928 | -64 | 4.3 | TATTGTGATCGCCATCACTTCC |
| Serratia proteamaculans 568 | Spro_2172 | -135 | 3.9 | TTTTGTGCTTTTTTTAGCGATT |
| -64 | 4.3 | TATTGTGATCGCCATCACTTCC | ||
| Edwardsiella tarda EIB202 | ETAE_1792 | -63 | 4 | TATCGTGATCCCCATCACTTCC |
| Proteus mirabilis HI4320 | PMI1423 | -55 | 3.9 | TATTGTGATCTTAATCACTGGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2630 | -62 | 3.8 | TATTGTAATTTCCATTATCTAT |
|
Position: -179
Score: 3.4 Sequence: AAACGTGATTTAACGCCTGATT
Locus tag: EschericcoliO157_010100017985
|
||||
| EschericcoliO157_010100017985 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hupA | ||||
| Ortholog function: DNA-binding protein HU-alpha (HU-2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4000 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_02986 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04382 | -179 | 3.4 | AAACGTGATTTACCGCCTGAAT |
| Enterobacter sp. 638 | Ent638_0213 | -179 | 3.5 | AAACGTGATTTAACGCCTGTTT |
| Yersinia pestis KIM | y0499 | -181 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Serratia proteamaculans 568 | Spro_0290 | -181 | 3.4 | AAACGTGATTTAACGCCTCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0238 | -197 | 3.3 | AAACGTGATTTAAGGCCTGAAA |
| Edwardsiella tarda EIB202 | ETAE_0183 | -182 | 3.3 | AAACGTGATTTAACACCTGATT |
| Proteus mirabilis HI4320 | PMI2771 | -183 | 3.7 | AAACGTGATTTAGTGCTTGAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0492 | -179 | 3.4 | AAACGTGATTTAATGCTTTAAA |
|
Position: -195
Score: 4.4 Sequence: TTTCGTGATGTTGCTTGCAAAA
Locus tag: EschericcoliO157_010100018205
|
||||
| EschericcoliO157_010100018205 | -195 | 4.4 | TTTCGTGATGTTGCTTGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malE | ||||
| Ortholog function: maltose ABC transporter periplasmic protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4034 | -195 | 4.4 | TTTCGTGATGTTGCTTGCAAAA |
| -161 | 4 | TTATGTGCGCATCTCCACATTA | ||
| -132 | 4.3 | TTCTGTAACAGAGATCACACAA | ||
|
Position: -254
Score: 4.4 Sequence: TTGTGTGATCTCTGTTACAGAA
Locus tag: EschericcoliO157_010100018210
|
||||
| EschericcoliO157_010100018210 | -254 | 4.4 | TTGTGTGATCTCTGTTACAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malK | ||||
| Ortholog function: maltose/maltodextrin transporter ATP-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4035 | -254 | 4.4 | TTGTGTGATCTCTGTTACAGAA |
| -225 | 3.9 | TAATGTGGAGATGCGCACATAA | ||
| -191 | 3.7 | TTTTGCAAGCAACATCACGAAA | ||
| Salmonella typhimurium LT2 | STM4230 | -254 | 4.7 | TTATGTGATCTGTGTTGCATAA |
| -225 | 3.6 | TAATGCGTGCTGGCGCACACAA | ||
| -223 | 3.8 | ATGCGTGCTGGCGCACACAAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03880 | -254 | 4.7 | TTATGTGATCTGTGTTGCATAA |
| -225 | 3.7 | TAATGCGTGTTGGCGCACATAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04424 | -254 | 4.5 | TTGTGTGATCTCCATTGCAAAA |
| -225 | 3.7 | TATTGCGTCCTGGAGCACAGAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0457 | -250 | 4 | GGGTGTGATCTCTATTACAAAA |
| -221 | 3.8 | AAGCGTGCCGTTGCCCACAAAA | ||
| -187 | 4.9 | TTTTGCGATAAATATCACAATT | ||
|
Position: -130
Score: 3.6 Sequence: CATCCTGCTTTTCATCACAAAA
Position: -57
Score: 4 Sequence: TTTTGCAACAAATCTCACAATA
Position: -4
Score: 3.8 Sequence: AAATATGCGCAAGATCACACAG
Locus tag: EschericcoliO157_010100018410
|
||||
| EschericcoliO157_010100018410 | -130 | 3.6 | CATCCTGCTTTTCATCACAAAA | |
| -57 | 4 | TTTTGCAACAAATCTCACAATA | ||
| -4 | 3.8 | AAATATGCGCAAGATCACACAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aphA | ||||
| Ortholog function: acid phosphatase/phosphotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4055 | -130 | 3.6 | CATCCTGCTTTTCATCACAAAA |
| -57 | 4 | TTTTGCAACAAATCTCACAATA | ||
| Salmonella typhimurium LT2 | STM4249 | -139 | 3.7 | TGTTGTGATCATCCTCTTTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03845 | -255 | 3.9 | TATTGTGAATGCGTGTACAGAA |
| -224 | 3.7 | GTGTGTGTGGTTTATCACACAT | ||
| Enterobacter sp. 638 | Ent638_0259 | -57 | 3.8 | TTTTTTGACCATTCGCTCAATT |
| Edwardsiella tarda EIB202 | ETAE_3469 | -150 | 5 | TTTTGTGATGAATGTCACGTAT |
| -98 | 3.7 | AACATAGATCATGATCACATTA | ||
| Proteus mirabilis HI4320 | PMI0729 | -148 | 4.3 | AAGTGTTAGATAGATCAAAAAA |
| -87 | 4.3 | TAACGTGCGCTATATCTCATTT | ||
| -34 | 4.3 | TTCTGTGATTAATATAAAAATT | ||
|
Position: -100
Score: 4.1 Sequence: TTGCGTGATCTGTCGCCCAAAT
Locus tag: EschericcoliO157_010100018510
|
||||
| EschericcoliO157_010100018510 | -100 | 4.1 | TTGCGTGATCTGTCGCCCAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acs | ||||
| Ortholog function: acetyl-coenzyme A synthetase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4069 | -100 | 4.1 | TTGCGTGATCTGTCGCCCAAAT |
| Salmonella typhimurium LT2 | STM4275 | -100 | 4.1 | TTGCGTGATCTGTCGCCCAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03816 | -101 | 4.3 | TTGCGTGATCTGCCGCGCAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04478 | -101 | 3.9 | TTGCGTGATCTGCCCCCCAATT |
| Enterobacter sp. 638 | Ent638_0276 | -101 | 4.1 | TTGCGTGATCTGTCGCCCAAAT |
| Yersinia pestis KIM | y0510 | -97 | 4.2 | ATACGTGATCTGCCGCCCAAAA |
| Serratia proteamaculans 568 | Spro_0297 | -97 | 4 | TTGCGTGATCTGCCGCCCAAAA |
| Proteus mirabilis HI4320 | PMI3037 | -97 | 4.5 | TTTCGTGATCTTATGCGCAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0074 | -98 | 4.2 | TTGCGTGATCTTCCGCGCAAAA |
|
Position: -227
Score: 5.1 Sequence: ATGTGTGAAGTTGATCACAAAT
Locus tag: EschericcoliO157_010100018745
|
||||
| EschericcoliO157_010100018745 | -227 | 5.1 | ATGTGTGAAGTTGATCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: proP | ||||
| Ortholog function: L-Proline/Glycine betaine transporter ProP | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4111 | -227 | 5.1 | ATGTGTGAAGTTGATCACAAAT |
|
Position: -53
Score: 3.5 Sequence: GACTGTGATCTATTCAGCAAAA
Locus tag: EschericcoliO157_010100018815
|
||||
| EschericcoliO157_010100018815 | -53 | 3.5 | GACTGTGATCTATTCAGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dcuB | ||||
| Ortholog function: C4-dicarboxylate transporter DcuB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4123 | -53 | 3.5 | GACTGTGATCTATTCAGCAAAA |
| Salmonella typhimurium LT2 | STM4301 | -53 | 3.5 | GGCTGTGATCCATTTATCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03748 | -52 | 3.9 | GACTGTGATCTATTTATCAAAA |
| Enterobacter sp. 638 | Ent638_2479 | -81 | 3.3 | AAATCTGATCTGGCTCCCAGCC |
| Serratia proteamaculans 568 | Spro_3863 | -77 | 3.6 | GTTTGTGATCGCTATCCCTCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1533 | -296 | 3.5 | TATTGCGAGCGAGATCTTTTAT |
| -247 | 3.5 | TTAATAGATTTAGATCAAGAAA | ||
| Edwardsiella tarda EIB202 | ETAE_2844 | -194 | 3.6 | ATACTTTATTCAGATCAATTTT |
| Proteus mirabilis HI4320 | PMI0389 | -138 | 3.3 | AACTATAACAACGATCAAAAAA |
|
Position: -251
Score: 4.3 Sequence: ATTTGTGAAATAGATCACCGCT
Position: -190
Score: 3.9 Sequence: AATTTTGCTAATGACCACAATA
Locus tag: EschericcoliO157_010100018945
|
||||
| EschericcoliO157_010100018945 | -251 | 4.3 | ATTTGTGAAATAGATCACCGCT | |
| -190 | 3.9 | AATTTTGCTAATGACCACAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fxsA | ||||
| Ortholog function: suppressor of F plamsid exlusion of phage T7 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4140 | -202 | 4.1 | TACCGTAATCTGGATCACTTTA |
| -152 | 4.3 | ATTTGTGAAATAGATCACCGCT | ||
| Salmonella typhimurium LT2 | STM4327 | -203 | 4.1 | TACCGTAATCTGGATCACTTAA |
| -153 | 4.1 | TTTTGTGAAATAGGTCACCGCT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03695 | -156 | 4.1 | TTTTGTGAAATAGGTCACCGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04530 | -140 | 3.7 | ATCTGTGAAATGGGTCACCGCT |
| Enterobacter sp. 638 | Ent638_0327 | -151 | 3.8 | ATCTGTGAAATGAATCACCGCT |
| Erwinia amylovora ATCC 49946 | EAM_0417 | -161 | 3.9 | ATATCTGTTCCAGGTCACATTG |
| Yersinia pestis KIM | y0607 | -245 | 4.8 | ATCTGTGATTGCTCTCACACTT |
| Serratia proteamaculans 568 | Spro_0407 | -117 | 4.9 | TTCTGTGATCTCATTCACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0623 | -245 | 3.7 | AACTGTGATTGTAGTCACGAGT |
| -185 | 3.6 | AAATGTGCAAAGGCGCACCCAT | ||
| Edwardsiella tarda EIB202 | ETAE_0312 | -189 | 4.6 | ATCTGTGATAATACTCACAGAT |
| Proteus mirabilis HI4320 | PMI2545 | -188 | 4.7 | TTTTGTGATCTATCTCATGGAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4136 | -188 | 5.6 | ATATGTGATATTTATCACAATT |
|
Position: -184
Score: 4.6 Sequence: AAGTGTTATTTTGATCGCAAAA
Locus tag: EschericcoliO157_010100019745
|
||||
| EschericcoliO157_010100019745 | -184 | 4.6 | AAGTGTTATTTTGATCGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mltB | ||||
| Ortholog function: membrane-bound lytic murein transglycosylase B | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2701 | -184 | 4.6 | AAGTGTTATTTTGATCGCAAAA |
| Salmonella typhimurium LT2 | STM2831 | -182 | 4.4 | AAGTGTTATTGTGATCGCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04055 | -184 | 4.5 | AAGTGTTATTTTGATCTCAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03036 | -296 | 4.3 | AAGTGTTAAATGGATCGCAAAA |
| Serratia proteamaculans 568 | Spro_3399 | -136 | 4.1 | TTCTGTGCTGCCCGTCACGTTT |
|
Position: -92
Score: 4.4 Sequence: TTTTGCGATCAAAATAACACTT
Locus tag: EschericcoliO157_010100019750
|
||||
| EschericcoliO157_010100019750 | -92 | 4.4 | TTTTGCGATCAAAATAACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: srlA | ||||
| Ortholog function: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2702 | -93 | 4.4 | TTTTGCGATCAAAATAACACTT |
| Salmonella typhimurium LT2 | STM2832 | -93 | 4.3 | TTTTGCGATCACAATAACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04056 | -93 | 4.3 | TTTTGAGATCAAAATAACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03037 | -92 | 4.6 | TTTTGCGATCCATTTAACACTT |
| Serratia proteamaculans 568 | Spro_3569 | -110 | 4.9 | AATTGTGATCTATTTAAAACAA |
|
Position: -177
Score: 4.2 Sequence: TCAGGTGACCGGTTTCACAAAT
Locus tag: EschericcoliO157_010100019825
|
||||
| EschericcoliO157_010100019825 | -177 | 4.2 | TCAGGTGACCGGTTTCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ascF | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2715 | -177 | 4.2 | TCAGGTGACCGGTTTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04070 | -179 | 4.4 | ACAAGTGATCATTCTCACAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03051 | -168 | 4.1 | CTTAGCGATCAAAATCACAAAA |
| Enterobacter sp. 638 | Ent638_3188 | -128 | 4.4 | CAAAGTGATCGTTATCACGAAT |
| -54 | 3.7 | TTTTGTGAAACCGGTTTCCTAT | ||
| Serratia proteamaculans 568 | Spro_0576 | -189 | 4.4 | AAAAGTGACCACCATCACGAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2165 | -255 | 3.9 | CATGGCGATCGTGGTCACATAA |
| -212 | 3.9 | TATTGAAATCGCACTCATATAT | ||
|
Position: -179
Score: 4.1 Sequence: ATTTGGGATCAAGATCACTGAT
Locus tag: EschericcoliO157_010100020355
|
||||
| EschericcoliO157_010100020355 | -179 | 4.1 | ATTTGGGATCAAGATCACTGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdaC | ||||
| Ortholog function: Serine transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2796 | -179 | 4.2 | ATTTGAGATCAAGATCACTGAT |
| Salmonella typhimurium LT2 | STM2970 | -176 | 4.2 | ATTTGAGATCGGGATCACTGAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04152 | -176 | 4.1 | ATTTGGGATCGCGATCACTGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03139 | -158 | 4.2 | ATTTGAGATCGCGATCACTGAT |
| Enterobacter sp. 638 | Ent638_3249 | -176 | 4.1 | ATTTGGGATCAGGATCACTGAT |
| Erwinia amylovora ATCC 49946 | EAM_1294 | -300 | 3.6 | ATTTGTTAAAAATCGCAAAAAA |
| -180 | 3.9 | AAATGTGATTCCGATCACCGGC | ||
| Yersinia pestis KIM | y2862 | -286 | 4.3 | AATTGAGATCACGATCACGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3158 | -195 | 3.7 | TTCTGTGATCGCCTCAATATTA |
| Proteus mirabilis HI4320 | PMI0672 | -283 | 4.3 | ATTTGAGATGGTGATCACGGTA |
|
Position: -144
Score: 4.1 Sequence: TTAGTTGAACTAGGTCACAAAA
Position: -54
Score: 4 Sequence: TAGTGTGAAAGGAACAACATTA
Locus tag: EschericcoliO157_010100020390
|
||||
| EschericcoliO157_010100020390 | -144 | 4.1 | TTAGTTGAACTAGGTCACAAAA | |
| -54 | 4 | TAGTGTGAAAGGAACAACATTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fucA | ||||
| Ortholog function: L-fuculose phosphate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2800 | -144 | 4.1 | TTAGTTGAACCAGGTCACAAAA |
| -54 | 4 | TAGTGTGAAAGGAACAACATTA | ||
| Salmonella typhimurium LT2 | STM2974 | -157 | 4.8 | TTAATTGATGTGAATCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04159 | -144 | 4.7 | TTAATTGATGCGTATCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03151 | -155 | 4.4 | ATAATTGACGCGGCTCACAAAA |
| Edwardsiella tarda EIB202 | ETAE_0293 | -175 | 4.2 | AGTCTTGATGACGGTCACAAAA |
|
Position: -207
Score: 4.9 Sequence: TAAAGTGATGGTAGTCACATAA
Locus tag: EschericcoliO157_010100020395
|
||||
| EschericcoliO157_010100020395 | -207 | 4.9 | TAAAGTGATGGTAGTCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fucP | ||||
| Ortholog function: L-fucose permease | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2801 | -207 | 4.9 | TAAAGTGATGGTAGTCACATAA |
| -167 | 4.5 | AAGTGTGACCGCCGTCATATTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04160 | -219 | 5 | TAAAGTGATGATAATCACATAA |
| -179 | 4.8 | AAATGTGACCACCATCATATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03152 | -260 | 4.7 | TAAAGTGACAATAATCACATAA |
| -220 | 4.6 | AAGTGTGACCATCATCATATTA | ||
|
Position: -43
Score: 4.6 Sequence: AATTGTGACATTTGTCATACAA
Locus tag: EschericcoliO157_010100022276
|
||||
| EschericcoliO157_010100022276 | -43 | 4.6 | AATTGTGACATTTGTCATACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yegH | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2063 | -43 | 4.6 | AATTGTGACATTTGTCATACAA |
| Salmonella typhimurium LT2 | STM2119 | -42 | 4.5 | AATTGTGACAATTGTCATATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00719 | -42 | 4.5 | AATTGTGACAACTGTCATATAA |
| Enterobacter sp. 638 | Ent638_2677 | -42 | 4.4 | AAGTGTGACAAATGTCATATAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1559 | -193 | 3.9 | ATTTGTTAATGTGATCACATGT |
|
Position: -112
Score: 4.3 Sequence: TTTTATGAAGCCCTTCACAGAA
Locus tag: EschericcoliO157_010100023886
|
||||
| EschericcoliO157_010100023886 | -112 | 4.3 | TTTTATGAAGCCCTTCACAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aldA | ||||
| Ortholog function: aldehyde dehydrogenase A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1415 | -112 | 4.3 | TTTTATGAAGCCCTTCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01448 | -137 | 4.7 | TTTTATGAAGCACATCACAAAA |
| -91 | 3.9 | ACATGTGATTGTTATTACTTAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01501 | -137 | 4.4 | TTTTATGAATCAGCTCACAGAA |
| Enterobacter sp. 638 | Ent638_1953 | -113 | 4.7 | TTTTATGAGATATCTCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0118 | -36 | 3.6 | AAGTATGACGGGTATATCACTT |
|
Position: -201
Score: 3.4 Sequence: TTGCGTGCTGTTTTCCAGAATT
Position: -94
Score: 3.3 Sequence: AAATGTGACGCAAAGAGGCTTT
Position: 24
Score: 3.4 Sequence: TTAGGTTTTTTGCATCACATCA
Locus tag: EschericcoliO157_010100023916
|
||||
| EschericcoliO157_010100023916 | -201 | 3.4 | TTGCGTGCTGTTTTCCAGAATT | |
| -94 | 3.3 | AAATGTGACGCAAAGAGGCTTT | ||
| 24 | 3.4 | TTAGGTTTTTTGCATCACATCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: trg | ||||
| Ortholog function: Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1421 | -201 | 3.4 | TTGCGTGCTGTTTTCCAGAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01456 | -108 | 3.7 | AAATGTGACAAACATTCCGATT |
| Enterobacter sp. 638 | Ent638_1961 | -110 | 3.5 | AAGTGTGACCCACCTGGCGCTT |
|
Position: -71
Score: 3.7 Sequence: TTTTGCAATCAAGTTATCATAA
Locus tag: EschericcoliO157_010100023921
|
||||
| EschericcoliO157_010100023921 | -71 | 3.7 | TTTTGCAATCAAGTTATCATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydcI | ||||
| Ortholog function: putative transcriptional regulators, LysR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1422 | -71 | 3.7 | TTTTGCAATCAAGTTATCATAA |
| Salmonella typhimurium LT2 | STM1625 | -71 | 3.6 | TTTTGCTATCAGGTTATCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01457 | -71 | 3.6 | TTTTGCTATCAGGTTATCAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01950 | -75 | 3.8 | TTTTGCTATCTGGTTATCAAAT |
| Enterobacter sp. 638 | Ent638_1964 | -71 | 3.6 | TTTTGCTATCAGGTTATCAAAA |
|
Position: -298
Score: 4.5 Sequence: TATCGTGACCTGGATCACTGTT
Locus tag: EschericcoliO157_010100024191
|
||||
| EschericcoliO157_010100024191 | -298 | 4.5 | TATCGTGACCTGGATCACTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit | ||||
| Enterobacter sp. 638 | Ent638_1222 | -295 | 4.2 | TATCGTGACTGTGATCACTGTT |
| Erwinia amylovora ATCC 49946 | EAM_1168 | -249 | 4.4 | AAGTGTGATTTTTGTCACTGTT |
| -190 | 3.6 | TAATGAGATTGTGATCCACTTA | ||
| Yersinia pestis KIM | y3071 | -254 | 4.5 | AATCGTGATCCTAATCACTGTT |
| Serratia proteamaculans 568 | Spro_1263 | -253 | 4.3 | ATCCGTGATCTAAATCACTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1357 | -265 | 4.7 | ATTCGTGATCTAAATCACTGTT |
| Edwardsiella tarda EIB202 | ETAE_2588 | -261 | 3.7 | ATGCGTGACCGTTGTCACTGTT |
| Proteus mirabilis HI4320 | PMI0565 | -264 | 4.3 | AAAAGTGATCCCTCTCACTGTT |
|
Position: -78
Score: 3.8 Sequence: TAATTTATTCCATGTCACACTT
Locus tag: EschericcoliO157_010100024426
|
||||
| EschericcoliO157_010100024426 | -78 | 3.8 | TAATTTATTCCATGTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galE2 | ||||
| Ortholog function: UDP-galactose-4-epimerase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0759 | -78 | 3.8 | TAATTTATTCCATGTCACACTT |
| Salmonella typhimurium LT2 | STM0776 | -78 | 3.7 | TAATTTATTACATGTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02376 | -36 | 3.7 | TAATATATTCCATGTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00773 | -78 | 3.7 | TAACTTGTGCTATGTCACACTT |
| -44 | 4.1 | ATATGCTATCTTCCTCACAAAC | ||
| Yersinia pestis KIM | y3043 | -163 | 3.7 | TTATTTGTCTATGCTCACAGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1389 | -72 | 3.7 | ATTCTCGCTGTAGATCACCTTT |
| Edwardsiella tarda EIB202 | ETAE_2564 | -195 | 3.7 | TAGTGTAAGCGATACCACAAAC |
|
Position: -296
Score: 3.6 Sequence: TTTTATAAATGCGTTCAAAATA
Locus tag: EschericcoliO157_010100025223
|
||||
| EschericcoliO157_010100025223 | -296 | 3.6 | TTTTATAAATGCGTTCAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gadB | ||||
| Ortholog function: Glutamate decarboxylase (EC 4.1.1.15) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1493 | -297 | 3.6 | TTTTATAAATGCGTTCAAAATA |
| -158 | 3.3 | TATTGTATTGTTTTTCAATGAA | ||
| -128 | 3.3 | ATTCGCGTAATATCTCACGATA | ||
| Edwardsiella tarda EIB202 | ETAE_2868 | -186 | 3.7 | TAGCGTTATTTTTCTCATCATT |
|
Position: -87
Score: 4.1 Sequence: AACTGTGGTTGCCATCACAGAT
Locus tag: EschericcoliO157_010100025328
|
||||
| EschericcoliO157_010100025328 | -87 | 4.1 | AACTGTGGTTGCCATCACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lsrR | ||||
| Ortholog function: LsrR, transcriptional repressor of lsr operon | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1512 | -87 | 4.1 | AACTGTGGTTGCCATCACAGAT |
| Salmonella typhimurium LT2 | STM4073 | -161 | 3.6 | AACTCTCATCCAGATCACGTTT |
| -92 | 4 | TTTTGTGGCGTTAATCACGGTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03508 | -75 | 3.7 | TTTTGCCAGTCGGCTCACACTT |
| Enterobacter sp. 638 | Ent638_3537 | -122 | 3.4 | TTTATTGATTAGGATCCAATTC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3142 | -137 | 4.3 | AATTGTGATCTTGGCAATATTT |
|
Position: -94
Score: 4.9 Sequence: AAACGCGATCCAGATCACAAAT
Locus tag: EschericcoliO157_010100025413
|
||||
| EschericcoliO157_010100025413 | -94 | 4.9 | AAACGCGATCCAGATCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sotB | ||||
| Ortholog function: Probable sugar efflux transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1528 | -94 | 4.9 | AAACGCGATCCAGATCACAAAT |
| Salmonella typhimurium LT2 | STM1522 | -94 | 4.5 | AAATGAGAAGCAGGTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01548 | -94 | 4.8 | TAATGAGACATACATCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01628 | -94 | 4.8 | AAATGAGACGCAGATCACAAAA |
| Enterobacter sp. 638 | Ent638_2000 | -95 | 4.9 | TTTTGAGATCTGCGTCACATAA |
|
Position: -103
Score: 4.6 Sequence: CTTAGTGATCTACCTCACCTTT
Locus tag: EschericcoliO157_010100025813
|
||||
| EschericcoliO157_010100025813 | -103 | 4.6 | CTTAGTGATCTACCTCACCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: b2462 | ||||
| Ortholog function: putative carboxysome structural protein, ethanol utilization | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2462 | -103 | 4.6 | CTTAGTGATCTACCTCACCTTT |
| Salmonella typhimurium LT2 | STM2470 | -168 | 3.8 | AAATGTGATGCACCACGATATT |
| -103 | 4.6 | CTTAGTGATCTACCTCACCTTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00333 | -103 | 4.6 | CTTAGTGATCTACTTCACCTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02796 | -102 | 4.3 | CTGAGTGATCCACTTCACCTTT |
|
Position: -257
Score: 3.9 Sequence: ATGAGTGCGTTAATTCACACTT
Locus tag: EschericcoliO157_010100025823
|
||||
| EschericcoliO157_010100025823 | -257 | 3.9 | ATGAGTGCGTTAATTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: maeB | ||||
| Ortholog function: malic enzyme | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2463 | -257 | 3.9 | ATGAGTGCGTTAATTCACACTT |
| Salmonella typhimurium LT2 | STM2472 | -240 | 3.8 | ATGAGTGTGTTGATTCACACTT |
| Enterobacter sp. 638 | Ent638_2958 | -231 | 4.1 | ATACATGACGTACTTAACAAAA |
| Yersinia pestis KIM | y1449 | -92 | 3.7 | GATTGTGATAAATCACTCACTA |
| Serratia proteamaculans 568 | Spro_3472 | -209 | 3.6 | CTTTGTTATCAAACTCACTATC |
| -90 | 4.1 | GTTTGTGACGTTTCTCTCACTA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2719 | -74 | 4 | TGTTATGATTTGACACACAGTA |
|
Position: -83
Score: 4 Sequence: TTTTTTGATGCGTTTAGCGAAA
Position: -53
Score: 3.9 Sequence: AAGTGTGAATTAACGCACTCAT
Locus tag: EschericcoliO157_010100025828
|
||||
| EschericcoliO157_010100025828 | -83 | 4 | TTTTTTGATGCGTTTAGCGAAA | |
| -53 | 3.9 | AAGTGTGAATTAACGCACTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: talA | ||||
| Ortholog function: Transaldolase (EC 2.2.1.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2464 | -83 | 4 | TTTTTTGATGCGTTTAGCGAAA |
| -53 | 3.9 | AAGTGTGAATTAACGCACTCAT | ||
| Salmonella typhimurium LT2 | STM2473 | -53 | 3.7 | AAGTGTGAATCAACACACTCAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02798 | -80 | 3.7 | TTTGGTTATGTACCTCATCAAT |
| Enterobacter sp. 638 | Ent638_2959 | -152 | 3.6 | ATTTGTTATCAATTTATAACAA |
| -83 | 3.9 | TTTTGTTAAGTACGTCATGTAT | ||
|
Position: -166
Score: 4.6 Sequence: ACATGTGAGCGAGATCAAATTA
Locus tag: EschericcoliO157_010100026098
|
||||
| EschericcoliO157_010100026098 | -166 | 4.6 | ACATGTGAGCGAGATCAAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: guaB | ||||
| Ortholog function: inosine-5'-monophosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2508 | -165 | 4.2 | ACATGTGAGCGAGATCAAATTC |
| Salmonella typhimurium LT2 | STM2511 | -164 | 4.2 | ACATGTGAGCGGGATCAAATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_00279 | -165 | 4.2 | ACATGTGAGCGGGATCAAATTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02834 | -162 | 4.3 | ACATGTGAGCAAGATCAAACTT |
| Enterobacter sp. 638 | Ent638_2999 | -162 | 4.5 | ACATGTGAGCAGGATCAAATTT |
| Erwinia amylovora ATCC 49946 | EAM_2465 | -174 | 4.6 | ACATGTGATGAAGATCAAACTT |
| Yersinia pestis KIM | y1362 | -89 | 4.8 | ACATGTGACCTGGATCAAATTT |
| Serratia proteamaculans 568 | Spro_3596 | -174 | 4.8 | ACATGTGACCCAGATCAAATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3209 | -175 | 4.8 | CATTGTGAGCCAGATCAAATTT |
| Edwardsiella tarda EIB202 | ETAE_2787 | -175 | 4.7 | TCATGTGACCTAGATCAAACTT |
| Proteus mirabilis HI4320 | PMI1546 | -173 | 4.7 | TCATGTGAGCCAGATCAAATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2713 | -176 | 4.4 | ACATGTGAGAAAGATCAAATTT |
|
Position: -91
Score: 4.6 Sequence: CTTTGTGATAAAAATCACTTTT
Locus tag: EschericcoliO157_010100026768
|
||||
| EschericcoliO157_010100026768 | -91 | 4.6 | CTTTGTGATAAAAATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqeF | ||||
| Ortholog function: Acetyl-CoA acetyltransferase (EC 2.3.1.9) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2844 | -91 | 4.6 | CTTTGTGATAAAAATCACTTTT |
| Salmonella typhimurium LT2 | STM3019 | -92 | 4.5 | CTTTGTGATAAAACTCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04222 | -92 | 4.6 | CTTTGTGATAAAACTCACCATT |
|
Position: -131
Score: 4.4 Sequence: AATTGGAATATCCATCACATAA
Locus tag: EschericcoliO157_010100026783
|
||||
| EschericcoliO157_010100026783 | -131 | 4.4 | AATTGGAATATCCATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araE | ||||
| Ortholog function: sugar transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2841 | -131 | 4.4 | AATTGGAATATCCATCACATAA |
| Salmonella typhimurium LT2 | STM3016 | -271 | 4 | TTTTATGATCTCATTAGCATAG |
| -131 | 4.9 | AAGTGTAATATCCATCACATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03264 | -191 | 4.4 | AAGTTTAATGTCCATCACAAAA |
| Enterobacter sp. 638 | Ent638_3294 | -209 | 3.7 | CGAGATGACATCGATCACATTT |
| -130 | 4.1 | AATTGGAATATCCATCACAGAA | ||
|
Position: -164
Score: 3.9 Sequence: TTTTTTTACCCCGATCACGGAT
Locus tag: EschericcoliO157_010100026938
|
||||
| EschericcoliO157_010100026938 | -164 | 3.9 | TTTTTTTACCCCGATCACGGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mltA | ||||
| Ortholog function: membrane-bound lytic murein transglycosylase A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2813 | -164 | 3.9 | TTTTTTTACCCCGATCACGGAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04178 | -164 | 3.8 | TTTTTTCACCCGGATCACGAAA |
|
Position: -108
Score: 4.1 Sequence: AAATGTGCTGTTAATCACATGC
Locus tag: EschericcoliO157_010100027196
|
||||
| EschericcoliO157_010100027196 | -108 | 4.1 | AAATGTGCTGTTAATCACATGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mlc | ||||
| Ortholog function: ROK family transcriptional regulatory protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1594 | -108 | 4.1 | AAATGTGCTGTTAATCACATGC |
| Salmonella typhimurium LT2 | STM1488 | -65 | 3.8 | AGTATTGAAGTGTTTCACCATA |
| Citrobacter koseri ATCC BAA-895 | CKO_01593 | -107 | 3.6 | AAaTGTGcagTAaATCACAcgg |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01574 | -104 | 3.8 | AAATGTGCGGTAAATCACAAGG |
| Enterobacter sp. 638 | Ent638_1919 | -107 | 3.8 | AAATGTGCGGTAAATCACAAGG |
| Erwinia amylovora ATCC 49946 | EAM_1710 | -143 | 4.9 | TTATGTGCTGTAAATCACATTC |
| Yersinia pestis KIM | y2110 | -146 | 4.8 | TTATGTGCAGCAAATCACATAA |
| Serratia proteamaculans 568 | Spro_2283 | -111 | 4.8 | ATTTGTGCAGCAAATCACATAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2258 | -226 | 4.4 | ATATGCGCGCTAAATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1713 | -113 | 4.8 | ATTTGTGCACTTAATCACATAA |
| Proteus mirabilis HI4320 | PMI1292 | -126 | 4.7 | ATATGTGCTTTCCATCACGATT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2226 | -119 | 4.8 | TTTCGTGCTGAATATCACATAT |
|
Position: -93
Score: 4 Sequence: TTATCTGATTTTACTCCCACTT
Locus tag: EschericcoliO157_010100027221
|
||||
| EschericcoliO157_010100027221 | -93 | 4 | TTATCTGATTTTACTCCCACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydgD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1598 | -93 | 4 | TTATCTGATTTTACTCCCACTT |
| Salmonella typhimurium LT2 | STM1484 | -93 | 4 | TTATCTGATTTTACTCCCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01604 | -95 | 4 | TTATCTGATTTTACTCCCACTT |
| Enterobacter sp. 638 | Ent638_1914 | -53 | 4.1 | TATTTTAATAGGGTTCACTTTT |
| Yersinia pestis KIM | y2013 | -160 | 3.6 | TTTTTTTATTTATAGCACGAAC |
|
Position: -102
Score: 3.9 Sequence: TAGTGAGGCATAAATCACATTA
Position: -42
Score: 3.8 Sequence: AAACGTTTTATCTGTCACAAAA
Locus tag: EschericcoliO157_010100027361
|
||||
| EschericcoliO157_010100027361 | -102 | 3.9 | TAGTGAGGCATAAATCACATTA | |
| -42 | 3.8 | AAACGTTTTATCTGTCACAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malI | ||||
| Ortholog function: Maltose regulon regulatory protein MalI (repressor for malXY) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1620 | -104 | 3.4 | TTTAGTGAGGCATAAATCACAT |
| -102 | 3.9 | TAGTGAGGCATAAATCACATTA | ||
| -42 | 3.9 | AAACGTTTTATCTGTCACATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01626 | -103 | 4 | TAGTGCGGCGCAAATCACATTA |
| -56 | 3.9 | ATAAGTGATTGATAAAACGTTT | ||
| -42 | 3.6 | AAACGTTTTATCTGTCACGTTA | ||
|
Position: -94
Score: 4.4 Sequence: TAATGTGATTTATGCCTCACTA
Locus tag: EschericcoliO157_010100027366
|
||||
| EschericcoliO157_010100027366 | -94 | 4.4 | TAATGTGATTTATGCCTCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malX | ||||
| Ortholog function: PTS family enzyme IIC/enzyme IIB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1621 | -154 | 4.1 | TTATGTGACAGATAAAACGTTT |
| -94 | 4.4 | TAATGTGATTTATGCCTCACTA | ||
| Enterobacter sp. 638 | Ent638_1827 | -96 | 4.2 | GAATGTGATTCAGAGCGCACTA |
|
Position: -132
Score: 3.6 Sequence: ATATTTGAAATGCAACAAATAG
Locus tag: EschericcoliO157_010100027591
|
||||
| EschericcoliO157_010100027591 | -132 | 3.6 | ATATTTGAAATGCAACAAATAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1654 | -132 | 3.6 | ATATTTGAAATGCAACAAATAG |
| Enterobacter sp. 638 | Ent638_1793 | -186 | 3.6 | TGAAGCGCTTTTGCTCACACTA |
| Erwinia amylovora ATCC 49946 | EAM_1665 | -145 | 3.9 | AAATGTTATTTTGTTATCATCT |
| Proteus mirabilis HI4320 | PMI1394 | -292 | 3.6 | TAATGTGCATTTATACACTTAT |
|
Position: -80
Score: 3.8 Sequence: TTCTGCGAGATTTCTCACAAAG
Locus tag: EschericcoliO157_010100027636
|
||||
| EschericcoliO157_010100027636 | -80 | 3.8 | TTCTGCGAGATTTCTCACAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cfa | ||||
| Ortholog function: cyclopropane fatty acyl phospholipid synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1661 | -80 | 3.8 | TTCTGCGAGATTTCTCACAAAG |
| Citrobacter koseri ATCC BAA-895 | CKO_01676 | -81 | 4.1 | TTCCGTGAGATTTCTCACAAAG |
|
Position: -104
Score: 3.5 Sequence: TTCTGTGACGCTTGCCAACATT
Locus tag: EschericcoliO157_010100028905
|
||||
| EschericcoliO157_010100028905 | -104 | 3.5 | TTCTGTGACGCTTGCCAACATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: csiE | ||||
| Ortholog function: Stationary phase inducible protein CsiE | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2535 | -104 | 3.5 | TTCTGTGACGCTTGCCAACATT |
| Salmonella typhimurium LT2 | STM2553 | -106 | 3.8 | TTCTGTGACACTCCTCAGCATT |
| Citrobacter koseri ATCC BAA-895 | CKO_00245 | -105 | 3.4 | TTCTGTGATGCTCGCCAGCATT |
| -42 | 3.6 | TTTAGCTATCCTTATCAAACAA | ||
| Erwinia amylovora ATCC 49946 | EAM_2496 | -103 | 3.4 | TTTTGTGACCTGCCTTAAAAGC |
| Yersinia pestis KIM | y1328 | -161 | 4.1 | TAATGTAACACATAGCGCATTA |
| Serratia proteamaculans 568 | Spro_3633 | -276 | 3.4 | AAAGGTGGTGTTCATATCAATA |
|
Position: -252
Score: 4.2 Sequence: TTTATTGATTTAAATCAAAGAT
Locus tag: EschericcoliO157_010100029175
|
||||
| EschericcoliO157_010100029175 | -252 | 4.2 | TTTATTGATTTAAATCAAAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: grcA | ||||
| Ortholog function: Autonomous glycyl radical cofactor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2579 | -125 | 4.2 | TTTATTGATTTAAATCAAAGAT |
|
Position: -179
Score: 3.9 Sequence: AAACTTGATTAACATCAATTTT
Locus tag: EschericcoliO157_010100029336
|
||||
| EschericcoliO157_010100029336 | -179 | 3.9 | AAACTTGATTAACATCAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh | ||||
| Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1109 | -154 | 3.9 | AAACTTGATTAACATCAATTTT |
| Salmonella typhimurium LT2 | STM1211 | -154 | 4.1 | AAACTTGATGCACATCAATTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01106 | -152 | 4.1 | AAACTTGATGCACATCAATTTT |
| Enterobacter sp. 638 | Ent638_1624 | -153 | 4 | AAACTTGATTCATATCAATTTT |
| Erwinia amylovora ATCC 49946 | EAM_1473 | -55 | 3.7 | TAAGGTTATTTTATTAACCTTT |
| Yersinia pestis KIM | y1777 | -152 | 3.8 | AAAGTTGATATATATCAATTTT |
| Serratia proteamaculans 568 | Spro_1926 | -153 | 4.3 | AAGTTTGATGTACATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1815 | -153 | 4 | TAAATTGATATATATCAATTTT |
| Edwardsiella tarda EIB202 | ETAE_2070 | -166 | 4.3 | TTATTTGATTTGAATCAATTTT |
| Proteus mirabilis HI4320 | PMI0875 | -157 | 4.6 | TTTTTTGATATAAATCAACTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2821 | -154 | 3.8 | GAATTTGATGTTGTTCAATTTT |
|
Position: -97
Score: 5.3 Sequence: AGATGTGATCTGGATCACATAC
Locus tag: EschericcoliO157_010100029351
|
||||
| EschericcoliO157_010100029351 | -97 | 5.3 | AGATGTGATCTGGATCACATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycfQ | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1111 | -175 | 5.3 | AGATGTGATCTGGATCACATAC |
| Salmonella typhimurium LT2 | STM1213 | -175 | 4.7 | AGATGTGATCTACATCACACGT |
| Citrobacter koseri ATCC BAA-895 | CKO_01943 | -227 | 4.4 | AGATGTGATCCAGGTCACACGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01109 | -227 | 4.8 | TAATGTGATCTATGTCACACGT |
| Enterobacter sp. 638 | Ent638_1626 | -174 | 4.6 | AGATGTGATCTGCATCACACGT |
|
Position: -114
Score: 3.7 Sequence: ATTAATGATTGTTATAAAAAAT
Position: -87
Score: 4.8 Sequence: GTATGTGATCCAGATCACATCT
Locus tag: EschericcoliO157_010100029356
|
||||
| EschericcoliO157_010100029356 | -114 | 3.7 | ATTAATGATTGTTATAAAAAAT | |
| -87 | 4.8 | GTATGTGATCCAGATCACATCT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycfR | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1112 | -114 | 3.7 | ATTAATGATTGTTATAAAAAAT |
| -87 | 4.8 | GTATGTGATCCAGATCACATCT | ||
| Salmonella typhimurium LT2 | STM1214 | -88 | 4.7 | ACGTGTGATGTAGATCACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_01942 | -113 | 3.8 | TATAATGATCGTTATAAAAAAA |
| -86 | 4.5 | ACGTGTGACCTGGATCACATCT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01110 | -95 | 4.9 | ACGTGTGACATAGATCACATTA |
| Enterobacter sp. 638 | Ent638_1627 | -91 | 4.7 | ACGTGTGATGCAGATCACATCT |
| Serratia proteamaculans 568 | Spro_4435 | -116 | 3.7 | TTATTTGATAAAGATTATCAAA |
|
Position: -201
Score: 3.5 Sequence: CTTAGTTACATGTTTAACACTT
Position: -35
Score: 3.4 Sequence: AGGTGTGCGATCAATAAAAAAA
Locus tag: EschericcoliO157_010100030011
|
||||
| EschericcoliO157_010100030011 | -201 | 3.5 | CTTAGTTACATGTTTAACACTT | |
| -35 | 3.4 | AGGTGTGCGATCAATAAAAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: csgD | ||||
| Ortholog function: DNA-binding transcriptional activator in two-component regulatory system | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1040 | -201 | 3.9 | TTTAGTTACATGTTTAACACTT |
| -134 | 3.3 | TAGTTTTATATTTTACCCATTT | ||
| Salmonella typhimurium LT2 | STM1142 | -202 | 3.4 | TTTGGTTACAAGTTTAACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02029 | -207 | 4.1 | TTTTGTTACAAGTTTAACACTT |
|
Position: -22
Score: 4 Sequence: AAATGTGTGCTCGATCTCATTC
Position: -20
Score: 3.7 Sequence: ATGTGTGCTCGATCTCATTCAT
Locus tag: EschericcoliO157_010100030031
|
||||
| EschericcoliO157_010100030031 | -22 | 4 | AAATGTGTGCTCGATCTCATTC | |
| -20 | 3.7 | ATGTGTGCTCGATCTCATTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycdZ | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1036 | -52 | 4 | AAATGTGTGCTCGATCTCATTC |
| -50 | 3.7 | ATGTGTGCTCGATCTCATTCAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02033 | -40 | 3.9 | AAATGTGTGCGTGATCTCATTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01059 | -52 | 4.1 | TACTGTGTTTTAGATCGCATTC |
| Serratia proteamaculans 568 | Spro_3290 | -125 | 4.2 | TTTTGTGACAAATTCCACATCT |
| -96 | 3.6 | TATCTTGTTTCTCATTACATAT | ||
| -73 | 4.6 | TTATGTGAAATACATCACATGA | ||
| Edwardsiella tarda EIB202 | ETAE_2360 | -124 | 4.3 | AAGTGTGATTGATGTCACTTTG |
| -72 | 3.6 | CGGTGTGATGTCCATCAATGAA | ||
| Proteus mirabilis HI4320 | PMI3124 | -240 | 3.7 | ATTAATAATATATATCAAACAA |
|
Position: -269
Score: 4.6 Sequence: TGGTGTGATCACGCGCACATTA
Position: 24
Score: 5.1 Sequence: AAATGTGACTTTTATCACGTAA
Locus tag: EschericcoliO157_010100030553
|
||||
| EschericcoliO157_010100030553 | -269 | 4.6 | TGGTGTGATCACGCGCACATTA | |
| 24 | 5.1 | AAATGTGACTTTTATCACGTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: b1963 | ||||
| Ortholog function: orf, hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1963 | -287 | 4.6 | TGGTGTGATCAGGCGCACATTA |
| Salmonella typhimurium LT2 | STM1994 | -70 | 5.5 | AAATGTGATTAATATCACATTA |
| -34 | 4.4 | TCATATGACTTACATCACAAAA | ||
|
Position: -201
Score: 4 Sequence: TGTTTTAAGCTCACTCACATAT
Locus tag: EschericcoliO157_010100030628
|
||||
| EschericcoliO157_010100030628 | -201 | 4 | TGTTTTAAGCTCACTCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rcsA | ||||
| Ortholog function: Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1951 | -201 | 4 | TGTTTTAAGCTCACTCACATAT |
| Salmonella typhimurium LT2 | STM1982 | -201 | 4 | TGTTTTTACTTCACTCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00992 | -200 | 4.1 | TGTTTTTACCTTACTCACATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02421 | -195 | 3.7 | TGTTTTTAATTCGGTCACACTA |
| Enterobacter sp. 638 | Ent638_2542 | -206 | 4.3 | TGTTTTTATGCCCTTCACAATA |
|
Position: -258
Score: 5.1 Sequence: TTACGTGATCCAAATCAAATTT
Locus tag: EschericcoliO157_010100031048
|
||||
| EschericcoliO157_010100031048 | -258 | 5.1 | TTACGTGATCCAAATCAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ychE | ||||
| Ortholog function: putative channel protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1242 | -257 | 5.1 | TTACGTGATCCAAATCAAATTT |
| Salmonella typhimurium LT2 | STM1748 | -256 | 4.8 | TTGTGTGATCTAAATCAAGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01319 | -167 | 5 | TTGCGTGATCCAGATCAAATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02198 | -261 | 4.8 | TTACGTGATTTAGATCAAGTAT |
| Enterobacter sp. 638 | Ent638_2303 | -256 | 4 | AAACATGATCTGAATCAATTTA |
| Erwinia amylovora ATCC 49946 | EAM_1899 | -158 | 3.8 | AAAGATGATGCAGATCATCAAT |
| Serratia proteamaculans 568 | Spro_2703 | -268 | 5.2 | TTTTGTGATTTAAATCATAAAA |
| Proteus mirabilis HI4320 | PMI1485 | -290 | 5.3 | TAAAGTGATCTACATCACAATA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2495 | -295 | 4.9 | TATATTGATCTTAATCACATAA |
|
Position: -93
Score: 3.5 Sequence: GAGTGCGAGTCTGCTCGCATAA
Locus tag: EschericcoliO157_010100031822
|
||||
| EschericcoliO157_010100031822 | -93 | 3.5 | GAGTGCGAGTCTGCTCGCATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sbmC | ||||
| Ortholog function: DNA gyrase inhibitor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2009 | -93 | 3.5 | GAGTGCGAGTCTGCTCGCATAA |
| Salmonella typhimurium LT2 | STM2061 | -102 | 4.1 | GATTGCGAGGTTGCTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00775 | -219 | 3.5 | GAGTGCGAGTCTGCTCACATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02467 | -88 | 3.6 | CTCTGTGAATTCGCGCACATAC |
| Enterobacter sp. 638 | Ent638_2577 | -97 | 3.6 | TCGTGCGAGTCTGCTCGCATAA |
| -65 | 3.6 | ATATTTGCTGCACATAAAGAAT | ||
|
Position: -21
Score: 3.9 Sequence: CTGTGTTATGGAAATCTCACTA
Locus tag: EschericcoliO157_010100032004
|
||||
| EschericcoliO157_010100032004 | -21 | 3.9 | CTGTGTTATGGAAATCTCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadR | ||||
| Ortholog function: fatty acid metabolism regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1187 | -21 | 3.9 | CTGTGTTATGGAAATCTCACTA |
| Salmonella typhimurium LT2 | STM1805 | -21 | 3.8 | CTGTGTAATGGAAATCTCACTA |
| Enterobacter sp. 638 | Ent638_2365 | -21 | 3.8 | CTGTGTAATGGAAATCTCACTA |
| Yersinia pestis KIM | y2177 | -113 | 3.8 | CTTTATGACTGCTTTCACCATT |
| Proteus mirabilis HI4320 | PMI1510 | -111 | 4.4 | TTTTATGATGCCATTCACTATT |
| -84 | 3.8 | ATGGTTGAGCTATATCAAAATT | ||
|
Position: -268
Score: 4.4 Sequence: TATGGTGAGCTGGCTCACATCT
Locus tag: EschericcoliO157_010100032014
|
||||
| EschericcoliO157_010100032014 | -268 | 4.4 | TATGGTGAGCTGGCTCACATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycgB | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1188 | -235 | 4.4 | TATGGTGAGCTGGCTCACATCT |
| Salmonella typhimurium LT2 | STM1804.S | -243 | 4.9 | TATGGTGACGTGCTTCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02310 | -174 | 4 | TATGGTGACTTAACTCACAGCA |
| Enterobacter sp. 638 | Ent638_2364 | -236 | 4.2 | TATGGTGACTTACCTCACACCT |
|
Position: -116
Score: 4.7 Sequence: AGATGTGAGCCAGCTCACCATA
Locus tag: EschericcoliO157_010100032019
|
||||
| EschericcoliO157_010100032019 | -116 | 4.7 | AGATGTGAGCCAGCTCACCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dadA | ||||
| Ortholog function: D-amino acid dehydrogenase small subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1189 | -116 | 4.7 | AGATGTGAGCCAGCTCACCATA |
| Salmonella typhimurium LT2 | STM1803 | -107 | 4.6 | ATATGTGAAGCACGTCACCATA |
| Citrobacter koseri ATCC BAA-895 | CKO_01193 | -107 | 4.5 | AGATGTGAGGTGCGTCACCATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02309 | -106 | 4.1 | TGCTGTGAGTTAAGTCACCATA |
| Enterobacter sp. 638 | Ent638_2363 | -107 | 4.3 | AGGTGTGAGGTAAGTCACCATA |
| Serratia proteamaculans 568 | Spro_2746 | -113 | 4.6 | AATTGTGAATGTTGTCACGTTT |
| Proteus mirabilis HI4320 | PMI1509 | -121 | 4.7 | AAATGTGATTTGACTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2561 | -114 | 5.4 | AATTGTGATCTAAATCATAAAT |
|
Position: -104
Score: 4.5 Sequence: AATTGTGATCACGCCCGCACAT
Locus tag: EschericcoliO157_010100032079
|
||||
| EschericcoliO157_010100032079 | -104 | 4.5 | AATTGTGATCACGCCCGCACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ychH | ||||
| Ortholog function: membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1205 | -105 | 4.5 | AATTGTGATCACGCCCGCACAT |
| Salmonella typhimurium LT2 | STM1782 | -105 | 4.4 | ATTTGTGATCGCACCCGCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01260 | -104 | 4.1 | AATTGTGATCGCCCACGCACTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02241 | -100 | 4.1 | TAATGTGATCGTGGACGCACTC |
| Enterobacter sp. 638 | Ent638_2343 | -119 | 3.7 | TGTTGTGACGAGAGTCATTAAT |
| -101 | 4 | TAATGTGATCATTCACGCAACT | ||
| Erwinia amylovora ATCC 49946 | EAM_1581 | -97 | 3.9 | AAATGTGATCGCTGACTCATCA |
| Yersinia pestis KIM | y2296 | -145 | 3.9 | AGTTGTGATCGCTACCGCAACA |
| Serratia proteamaculans 568 | Spro_1985 | -117 | 4.2 | ATTTGTGATCGCCTACGCAATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2185 | -275 | 3.6 | TAGCGTGATTATGAGAACGCTA |
| -117 | 3.8 | ATCTGTGATCCCTCCCGCAATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2065 | -189 | 4.1 | AGTTGTGATCGTGTCCGCAATG |
|
Position: -166
Score: 4.5 Sequence: AAAATTGATTTAAATCACGTTA
Position: -82
Score: 3.8 Sequence: TAATGTGATCTATGTAGGATCA
Locus tag: EschericcoliO157_010100034340
|
||||
| EschericcoliO157_010100034340 | -166 | 4.5 | AAAATTGATTTAAATCACGTTA | |
| -82 | 3.8 | TAATGTGATCTATGTAGGATCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompW | ||||
| Ortholog function: outer membrane protein W | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1256 | -166 | 4.9 | AAAATTGATTTAAATCACATTA |
| -82 | 3.8 | TAATGTGATCTATGTAGGATCA | ||
| Salmonella typhimurium LT2 | STM1732 | -82 | 4.2 | AAATGTGATCTGTATTAGATCA |
| Citrobacter koseri ATCC BAA-895 | CKO_01333 | -82 | 3.9 | TAATGTGATCTGTATTGGATCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01248 | -101 | 3.9 | CATTGCGATCGGTAGCAAAAAT |
| -45 | 4 | TAGTGTGATCTAAAACAGATCA | ||
| Enterobacter sp. 638 | Ent638_2283 | -121 | 3.7 | AAAATTAATCTGGATCAACAAA |
| Yersinia pestis KIM | y2044 | -69 | 3.9 | AGATGTGATCTCGATTAGATCA |
| Serratia proteamaculans 568 | Spro_2674 | -135 | 3.8 | TTTTTTGATTCAGATCAATCCT |
| Edwardsiella tarda EIB202 | ETAE_1528 | -161 | 3.9 | CTGATTGATGTCTATCAAATTT |
| Proteus mirabilis HI4320 | PMI1350 | -168 | 4.6 | AAATTTGATGTGGATCAATTAT |
| -85 | 3.8 | AGTTGTGATCGGCATTAGATCA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2478 | -164 | 4.3 | AACTTTGATTTGGATCAAGTTA |
| -39 | 3.8 | TATTTTGATTGACTTTAAATCA | ||
|
Position: -87
Score: 4.1 Sequence: AACTGTGGTTGCCATCACAGAT
Locus tag: EschericcoliO157_010100034550
|
||||
| EschericcoliO157_010100034550 | -87 | 4.1 | AACTGTGGTTGCCATCACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lsrR | ||||
| Ortholog function: LsrR, transcriptional repressor of lsr operon | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1512 | -87 | 4.1 | AACTGTGGTTGCCATCACAGAT |
| Salmonella typhimurium LT2 | STM4073 | -161 | 3.6 | AACTCTCATCCAGATCACGTTT |
| -92 | 4 | TTTTGTGGCGTTAATCACGGTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03508 | -75 | 3.7 | TTTTGCCAGTCGGCTCACACTT |
| Enterobacter sp. 638 | Ent638_3537 | -122 | 3.4 | TTTATTGATTAGGATCCAATTC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3142 | -137 | 4.3 | AATTGTGATCTTGGCAATATTT |
|
Position: -296
Score: 3.9 Sequence: CTGTGTTATGGAAATCTCACTA
Locus tag: EschericcoliO157_010100034625
|
||||
| EschericcoliO157_010100034625 | -296 | 3.9 | CTGTGTTATGGAAATCTCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadR | ||||
| Ortholog function: fatty acid metabolism regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1187 | -21 | 3.9 | CTGTGTTATGGAAATCTCACTA |
| Salmonella typhimurium LT2 | STM1805 | -21 | 3.8 | CTGTGTAATGGAAATCTCACTA |
| Enterobacter sp. 638 | Ent638_2365 | -21 | 3.8 | CTGTGTAATGGAAATCTCACTA |
| Yersinia pestis KIM | y2177 | -113 | 3.8 | CTTTATGACTGCTTTCACCATT |
| Proteus mirabilis HI4320 | PMI1510 | -111 | 4.4 | TTTTATGATGCCATTCACTATT |
| -84 | 3.8 | ATGGTTGAGCTATATCAAAATT | ||
|
Position: -186
Score: 4.5 Sequence: TAATGCGATCTATATCACGCTG
Locus tag: EschericcoliO157_010100034765
|
||||
| EschericcoliO157_010100034765 | -186 | 4.5 | TAATGCGATCTATATCACGCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uidA | ||||
| Ortholog function: Beta-glucuronidase (EC 3.2.1.31) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1617 | -181 | 4.5 | TAATGCGATCTATATCACGCTG |
| -140 | 3.4 | TTTTTTGATCGCGGTGTCAGTT | ||
|
Position: -256
Score: 4.6 Sequence: TATAGTGATCCACGCCACATTT
Position: -141
Score: 3.5 Sequence: TATTTTAACAAAAAACACACTA
Locus tag: EschericcoliO157_010100035063
|
||||
| EschericcoliO157_010100035063 | -256 | 4.6 | TATAGTGATCCACGCCACATTT | |
| -141 | 3.5 | TATTTTAACAAAAAACACACTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: Argininosuccinate synthase (EC 6.3.4.5) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3172 | -253 | 4.6 | TATAGTGATCCACGCCACATTT |
| Erwinia amylovora ATCC 49946 | EAM_0139 | -121 | 3.5 | AATAGTGAATAAAAATACAATA |
| Serratia proteamaculans 568 | Spro_4779 | -167 | 4 | TATTGTGAATAAAAATACAATA |
| Edwardsiella tarda EIB202 | ETAE_3480 | -160 | 3.4 | AATTATGAATAAAAATACAATA |
| Proteus mirabilis HI4320 | PMI3239 | -57 | 3.6 | TTTTTTGAATAAAAATACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4742 | -59 | 3.6 | TTTTTTGAATAAAAATACATTA |
|
Position: -283
Score: 3.9 Sequence: TAACATGATCAGTGTCAGATTT
Locus tag: EschericcoliO157_010100036015
|
||||
| EschericcoliO157_010100036015 | -283 | 3.9 | TAACATGATCAGTGTCAGATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: zwf | ||||
| Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1852 | -208 | 3.9 | TAACATGATCAGTGTCAGATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02367 | -225 | 3.8 | TTACATGATCAGGGTCGTATTT |
| Yersinia pestis KIM | y2244 | -231 | 4.1 | TAATATGACCTGTGTCTAATTT |
| Proteus mirabilis HI4320 | PMI1157 | -225 | 3.7 | AAGTATGACCTGTGTCTAACTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2122 | -234 | 4.2 | TAATTTAATGTTTTTCATAAAA |