Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylF gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -254
Score: 4.1332
Sequence: AAGTGTGCGCCGCCTCGCAAAA
Position: -162
Score: 3.80233
Sequence: AAGTACGATCTCGGTCATAATT
Locus tag: CKO_05022
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: CKO_05023
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: CKO_05024
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: CKO_05025
Name: CKO_05025
Funciton: hypothetical protein
Locus tag: CKO_05026
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-CKO_05025-xylR -254 4.1 AAGTGTGCGCCGCCTCGCAAAA CKO_05022
-162 3.8 AAGTACGATCTCGGTCATAATT
Enterobacter sp. 638
Position: -264
Score: 3.90976
Sequence: AAACGTGCGCTGGCTCCCAAAA
Locus tag: Ent638_0155
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: Ent638_0154
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: Ent638_0153
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: Ent638_0152
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-xylR -264 3.9 AAACGTGCGCTGGCTCCCAAAA Ent638_0155
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -272
Score: 4.51076
Sequence: AAATATGACCCGCATCAAAAAA
Locus tag: ECA0098
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: ECA0099
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: ECA0100
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: ECA0101
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-xylR -272 4.5 AAATATGACCCGCATCAAAAAA ECA0098
Escherichia coli str. K-12 substr. MG1655
Position: -253
Score: 4.21823
Sequence: AAGTGTGCGCTCGCTCGCAAAA
Position: -163
Score: 3.69611
Sequence: AAGTAAGATCTCGGTCATAAAT
Locus tag: b3566
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: b3567
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: b3568
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: b3569
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-xylR -253 4.2 AAGTGTGCGCTCGCTCGCAAAA b3566
-163 3.7 AAGTAAGATCTCGGTCATAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -234
Score: 3.77005
Sequence: AAATACGATCGCCGTCATAATT
Locus tag: KPN_03930
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: KPN_03931
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: KPN_03932
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: KPN_03933
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-xylR -234 3.8 AAATACGATCGCCGTCATAATT KPN_03930
Serratia proteamaculans 568
Position: -259
Score: 4.44408
Sequence: AAATGTGCGACAGATCTCATAA
Position: -166
Score: 3.73072
Sequence: AAGCATGACCGCCATCATAAAA
Locus tag: Spro_0099
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: Spro_0100
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: Spro_0101
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: Spro_0102
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-xylR -259 4.4 AAATGTGCGACAGATCTCATAA Spro_0099
-166 3.7 AAGCATGACCGCCATCATAAAA
Yersinia pestis KIM
Position: -264
Score: 4.7557
Sequence: AATTGTGGTGTAGATCTCATAA
Position: -160
Score: 4.21939
Sequence: AAACATGATCGTTATCATAAAA
Locus tag: y4056
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: y4055
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: y4054
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: y4053
Name: xylR
Funciton: Xylose activator XylR (AraC family)
xylF-xylG-xylH-xylR -264 4.8 AATTGTGGTGTAGATCTCATAA y4056
-160 4.2 AAACATGATCGTTATCATAAAA