Propagation of LiuR regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog:	LiuR - Ralstonia
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:
Biological process:	Branched-chain amino acid degradation
Effector:
Phylum:	Proteobacteria/beta
Propagated regulon:
Target genome	Ralstonia eutropha JMP134
Orthologous TF(s)	Reut_A0133
Regulated genes	4

Built upon 57 sites [see more]

Predicted regulatory interactions in *Ralstonia eutropha JMP134*
	Locus tag	Position	Score	Sequence
Position: -155 Score: 6.2 Sequence: GTTGACGTTTACGTTAGC Locus tag: Reut_A0132
	Reut_A0132	-155	6.2	GTTGACGTTTACGTTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: RSc0281
Ortholog function: Metallo-beta-lactamase family protein
Ralstonia solanacearum GMI1000	RS03248	-77	6.3	ATTGACGTTTACGTTAGC
		-71	4.9	GTTTACGTTAGCGTCAAA
Ralstonia pickettii 12J	Rpic_0131	-91	6.3	ATTGACGTTTACGTTAGC
		-85	5.1	GTTTACGTTAGCGTCAAT
Ralstonia metallidurans CH34	Rmet_0101	-56	6.2	ATTGACGTTAACGTTAGC
		-50	4.8	GTTAACGTTAGCGTCAAG
Ralstonia eutropha JMP134	Reut_A0132	-155	6.2	GTTGACGTTTACGTTAGC
		-149	5.5	GTTTACGTTAGCGTCAAC
Ralstonia eutropha H16	H16_A0164	-130	6.3	ATTGACGTTTACGTTAGC
		-124	5.5	GTTTACGTTAGCGTCAAC
Cupriavidus taiwanensis	RALTA_A0107	-132	6.2	GTTGACGTTTACGTTAGC
		-126	5.5	GTTTACGTTAGCGTCAAC

Position: -99 Score: 6.4 Sequence: GTTGACGCTAACGTAAAC Locus tag: Reut_A0133
	Reut_A0133	-99	6.4	GTTGACGCTAACGTAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: liuR
Ortholog function: Transcriptional regulator, MerR family
Ralstonia solanacearum GMI1000	RS03247	-107	6.1	TTTGACGCTAACGTAAAC
		-101	4.8	GCTAACGTAAACGTCAAT
Ralstonia pickettii 12J	Rpic_0130	-117	6.4	ATTGACGCTAACGTAAAC
		-111	4.8	GCTAACGTAAACGTCAAT
Ralstonia metallidurans CH34	Rmet_0102	-100	6.2	CTTGACGCTAACGTTAAC
		-94	5.1	GCTAACGTTAACGTCAAT
Ralstonia eutropha JMP134	Reut_A0133	-99	6.4	GTTGACGCTAACGTAAAC
		-93	5.1	GCTAACGTAAACGTCAAC
Ralstonia eutropha H16	H16_A0165	-99	6.4	GTTGACGCTAACGTAAAC
		-93	4.8	GCTAACGTAAACGTCAAT
Cupriavidus taiwanensis	RALTA_A0108	-98	6.4	GTTGACGCTAACGTAAAC
		-92	5.1	GCTAACGTAAACGTCAAC

Position: -58 Score: 6.6 Sequence: ATTGACGTTTACGTAAAC Locus tag: Reut_A0134
	Reut_A0134	-58	6.6	ATTGACGTTTACGTAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaI
Ortholog function: Phenylacetic acid degradation-related protein
Ralstonia eutropha JMP134	Reut_A0134	-58	6.6	ATTGACGTTTACGTAAAC
		-52	5.3	GTTTACGTAAACGTCAAT
Ralstonia eutropha H16	H16_A0166	-93	6.6	ATTGACGTTTACGTAAAC
		-87	5.3	GTTTACGTAAACGTCAAT
Cupriavidus taiwanensis	RALTA_A0109	-90	6.6	ATTGACGTTTACGTAAAC
		-84	5.5	GTTTACGTAAACGTAAAT

Position: -56 Score: 6.6 Sequence: GTTGACGTTTACGTAAAC Locus tag: Reut_A0589
	Reut_A0589	-56	6.6	GTTGACGTTTACGTAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaH
Ortholog function: 3-hydroxyacyl-CoA dehydrogenase
Ralstonia metallidurans CH34	Rmet_0531	-44	6.6	ATTGACGTTAACGTAAAC
Ralstonia eutropha JMP134	Reut_A0589	-56	6.6	GTTGACGTTTACGTAAAC
		-50	4.5	GTTTACGTAAACGGCAGT
Ralstonia eutropha H16	H16_A0602	-53	6.6	ATTGACGTTTACGTAAAC
		-47	5.1	GTTTACGTAAACGGCAAC
Cupriavidus taiwanensis	RALTA_A0558	-44	6.1	CTTAACGTTTACGTAAAC
		-38	5.3	GTTTACGTAAACGGAAAC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of LiuR regulog to Ralstonia eutropha JMP134

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --