Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaH gene

Properties
Regulog: LiuR - Ralstonia
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode:
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 57 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -44
Score: 6.112
Sequence: CTTAACGTTTACGTAAAC
Position: -38
Score: 5.32523
Sequence: GTTTACGTAAACGGAAAC
Locus tag: RALTA_A0558
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH -44 6.1 CTTAACGTTTACGTAAAC RALTA_A0558
-38 5.3 GTTTACGTAAACGGAAAC
Ralstonia eutropha H16
Position: -53
Score: 6.63969
Sequence: ATTGACGTTTACGTAAAC
Position: -47
Score: 5.13522
Sequence: GTTTACGTAAACGGCAAC
Locus tag: H16_A0602
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH -53 6.6 ATTGACGTTTACGTAAAC H16_A0602
-47 5.1 GTTTACGTAAACGGCAAC
Ralstonia eutropha JMP134
Position: -56
Score: 6.58437
Sequence: GTTGACGTTTACGTAAAC
Position: -50
Score: 4.54979
Sequence: GTTTACGTAAACGGCAGT
Locus tag: Reut_A0589
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH -56 6.6 GTTGACGTTTACGTAAAC Reut_A0589
-50 4.5 GTTTACGTAAACGGCAGT
Ralstonia metallidurans CH34
Position: -44
Score: 6.59853
Sequence: ATTGACGTTAACGTAAAC
Locus tag: Rmet_0531
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH -44 6.6 ATTGACGTTAACGTAAAC Rmet_0531
Ralstonia pickettii 12J
Position: -56
Score: 5.8905
Sequence: CTTGACGCGAACGTAAAC
Position: -50
Score: 3.9865
Sequence: GCGAACGTAAACGTCAAG
Locus tag: Rpic_2811
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH -56 5.9 CTTGACGCGAACGTAAAC Rpic_2811
-50 4 GCGAACGTAAACGTCAAG
Ralstonia solanacearum GMI1000
Position: -53
Score: 5.23171
Sequence: TATGACGTTGACGTAAAC
Position: -47
Score: 5.66139
Sequence: GTTGACGTAAACGTCAAT
Locus tag: RS05766
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH -53 5.2 TATGACGTTGACGTAAAC RS05766
-47 5.7 GTTGACGTAAACGTCAAT