Propagation of NsrR regulog to Shewanella halifaxensis HAW-EB4
| Source regulog: | NsrR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella halifaxensis HAW-EB4 |
| Orthologous TF(s) | Shal_0039 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -13
Score: 5.6 Sequence: ACATGTAAATAATATGCATGA
Locus tag: Shal_1103
|
||||
| Shal_1103 | -13 | 5.6 | ACATGTAAATAATATGCATGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hcp | ||||
| Ortholog function: Hydroxylamine reductase (EC 1.7.-.-) | ||||
| Shewanella oneidensis MR-1 | SO_1363 | -42 | 5.2 | ACATGTAAAAATAAAGCATGA |
| Shewanella putrefaciens CN-32 | Sputcn32_1174 | -42 | 5.5 | ACATGCATAAATAAAGCATGA |
| Shewanella sp W3-18-1 | Sputw3181_2990 | -42 | 5.5 | ACATGCATAAATAAAGCATGA |
| Shewanella sp ANA-3 | Shewana3_3011 | -42 | 5.4 | ACATGCAAAAATAAAGCATGA |
| Shewanella sp MR-4 | Shewmr4_2832 | -42 | 5.4 | ACATGCAAAAATAAAGCATGA |
| Shewanella sp MR-7 | Shewmr7_2914 | -42 | 5.4 | ACATGCAAAAATAAAGCATGA |
| Shewanella baltica OS155 | Sbal_1216 | -42 | 5.2 | ACATGTAAAAATAAAGCATGA |
| Shewanella frigidimarina NCIMB 400 | Sfri_3609 | -43 | 5 | ACATGTAAAACTTATACATGA |
| Shewanella amazonensis SB2B | Sama_0895 | -83 | 4.5 | TGCTGCTTTTTAAATGCAGCA |
| -40 | 5.5 | ACATGCATAAATAAAGCATGA | ||
| Shewanella loihica PV-4 | Shew_1069 | -41 | 5.1 | ACGTGCAAATAAAAAGCATGA |
| Shewanella pealeana ATCC 700345 | Spea_1055 | -43 | 5.6 | ACATGTAAATAATATGCATGA |
| Shewanella halifaxensis HAW-EB4 | Shal_1103 | -13 | 5.6 | ACATGTAAATAATATGCATGA |
| Shewanella piezotolerans WP3 | swp_3762 | 41 | 5.9 | AGATGCAAATTATATGCATGT |
| Shewanella sediminis HAW-EB3 | Ssed_1165 | -42 | 5.4 | ACATGCAAATAAAAAGCATGA |
| Shewanella woodyi ATCC 51908 | Swoo_1260 | -42 | 5.4 | ACATGCAAATAAAAAGCATGA |
|
Position: -39
Score: 4.2 Sequence: AGGTGTATTTAAAATGTGTGT
Locus tag: Shal_1261
|
||||
| Shal_1261 | -39 | 4.2 | AGGTGTATTTAAAATGTGTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nnrS2 | ||||
| Ortholog function: NnrS protein involved in response to NO | ||||
| Shewanella sp ANA-3 | Shewana3_2362 | -46 | 4.5 | AAGTGCAATTATTATGAAGCT |
| Shewanella denitrificans OS217 | Sden_2837 | -110 | 4.4 | ACAatCATtaTAaATaCcTGT |
| Shewanella frigidimarina NCIMB 400 | Sfri_3037 | -64 | 5.6 | AGATTTATATATTATGCATGT |
| Shewanella pealeana ATCC 700345 | Spea_1227 | -35 | 4.8 | AGCTGTATTTTAAATGCGTGT |
| Shewanella piezotolerans WP3 | swp_3404 | -39 | 4.2 | AggTaCATtaAAaATaCcTGT |