Propagation of SO3393 regulog to Shewanella sp W3-18-1
| Source regulog: | SO3393 - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Drug resistance |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella sp W3-18-1 |
| Orthologous TF(s) | Sputw3181_1291 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -119
Score: 7.2 Sequence: TCTTGAATGTGCATTCAAGA
Locus tag: Sputw3181_1291
|
||||
| Sputw3181_1291 | -119 | 7.2 | TCTTGAATGTGCATTCAAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3393 | ||||
| Ortholog function: Transcriptional regulator, TetR family | ||||
| Shewanella oneidensis MR-1 | SO_3393 | -115 | 7 | TCTTGAATGTACGTTCAAGA |
| -88 | 5.8 | ATTTGAATGATCATTCAAGA | ||
| -64 | 5.5 | TTTTGAATGTTTGTTCAATA | ||
| Shewanella putrefaciens CN-32 | Sputcn32_2721 | -119 | 7.2 | TCTTGAATGTGCATTCAAGA |
| -92 | 5.4 | ATTTGAATGAACATTCAAGT | ||
| -68 | 5.5 | TTTTGAATGTTTGTTCAAAA | ||
| Shewanella sp W3-18-1 | Sputw3181_1291 | -119 | 7.2 | TCTTGAATGTGCATTCAAGA |
| -92 | 5.4 | ATTTGAATGAACATTCAAGT | ||
| -68 | 5.5 | TTTTGAATGTTTGTTCAAAA | ||
| Shewanella sp ANA-3 | Shewana3_1158 | -114 | 7.2 | TCTTGAATGTGCATTCAAGA |
| -87 | 5.5 | ATTTGAACGATCATTCAAGA | ||
| -63 | 5.5 | TTTTGAATGTTTGTTCAAAA | ||
| Shewanella sp MR-4 | Shewmr4_1157 | -115 | 7.2 | TCTTGAATGTGCATTCAAGA |
| -88 | 5.5 | ATTTGAACGATCATTCAAGA | ||
| -64 | 5.5 | TTTTGAATGTTTGTTCAAAA | ||
| Shewanella sp MR-7 | Shewmr7_1228 | -115 | 7 | TCTTGAATATGCATTCAAGA |
| -88 | 5.5 | ATTTGAACGATCATTCAAGA | ||
| -64 | 5.5 | TTTTGAATGTTTGTTCAAAA | ||
| Shewanella baltica OS155 | Sbal_1248 | -119 | 7 | TCTTGAATATGCATTCAAGA |
| -92 | 5 | ATTTGAACGATCATTCAAGT | ||
| -68 | 6 | TTTTGAATGTTCATTCAAAA | ||
| Shewanella denitrificans OS217 | Sden_1229 | 14 | 7.2 | TCTTGAATGTGCATTCAAGA |
| 41 | 5 | ATTTGAACATTCATTCAAGT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_1088 | -131 | 7 | TCTTGAATATGCATTCAAGA |
| -103 | 5.6 | AATTGAATGCACATTCAAGT | ||
| Shewanella amazonensis SB2B | Sama_2408 | -113 | 5.2 | TTTTGAACAGGCATTCAAAA |
| -86 | 6.8 | TCTTGAACATACATTCAAGA | ||
| -62 | 5.7 | TTTTGAACATACATTCAAAA | ||
| Shewanella loihica PV-4 | Shew_3099 | -118 | 6.7 | TCTTGAATGAGCGTTCAAGA |
| -67 | 5.8 | TTTTGAACGTTCATTCAAAA | ||
| Shewanella piezotolerans WP3 | swp_0976 | -2 | 7 | TCTTGAATGAACATTCAAGA |
| 25 | 5 | ATTTGAATAATCATTCAAGT | ||
| 49 | 5.5 | TTTTGAACAAACATTCAAAA | ||
| Shewanella sediminis HAW-EB3 | Ssed_3643 | -128 | 7 | TCTTGAATGTTCATTCAAGA |
| -101 | 5 | ATTTGAACGATCATTCAAGT | ||
| -77 | 5.5 | TTTTGAACAAACATTCAAAA | ||
| Shewanella woodyi ATCC 51908 | Swoo_4056 | -113 | 7 | TCTTGAATGTTCATTCAAGA |
| -86 | 5 | ATTTGAACGATCATTCAAGT | ||
| -62 | 5.5 | TTTTGAACAAACATTCAAAA | ||
|
Position: -34
Score: 7.2 Sequence: TCTTGAATGCACATTCAAGA
Locus tag: Sputw3181_1292
|
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| Sputw3181_1292 | -34 | 7.2 | TCTTGAATGCACATTCAAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3392 | ||||
| Ortholog function: NADH-dependent flavin oxidoreductase, Oye family | ||||
| Shewanella oneidensis MR-1 | SO_3392 | -85 | 5.5 | TATTGAACAAACATTCAAAA |
| -61 | 5.8 | TCTTGAATGATCATTCAAAT | ||
| -34 | 7 | TCTTGAACGTACATTCAAGA | ||
| Shewanella putrefaciens CN-32 | Sputcn32_2720 | -85 | 5.5 | TTTTGAACAAACATTCAAAA |
| -61 | 5.4 | ACTTGAATGTTCATTCAAAT | ||
| -34 | 7.2 | TCTTGAATGCACATTCAAGA | ||
| Shewanella sp W3-18-1 | Sputw3181_1292 | -85 | 5.5 | TTTTGAACAAACATTCAAAA |
| -61 | 5.4 | ACTTGAATGTTCATTCAAAT | ||
| -34 | 7.2 | TCTTGAATGCACATTCAAGA | ||
| Shewanella sp ANA-3 | Shewana3_1159 | -85 | 5.5 | TTTTGAACAAACATTCAAAA |
| -61 | 5.5 | TCTTGAATGATCGTTCAAAT | ||
| -34 | 7.2 | TCTTGAATGCACATTCAAGA | ||
| Shewanella sp MR-4 | Shewmr4_1158 | -85 | 5.5 | TTTTGAACAAACATTCAAAA |
| -61 | 5.5 | TCTTGAATGATCGTTCAAAT | ||
| -34 | 7.2 | TCTTGAATGCACATTCAAGA | ||
| Shewanella sp MR-7 | Shewmr7_1229 | -85 | 5.5 | TTTTGAACAAACATTCAAAA |
| -61 | 5.5 | TCTTGAATGATCGTTCAAAT | ||
| -34 | 7 | TCTTGAATGCATATTCAAGA | ||
| Shewanella baltica OS155 | Sbal_1249 | -85 | 6 | TTTTGAATGAACATTCAAAA |
| -61 | 5 | ACTTGAATGATCGTTCAAAT | ||
| -34 | 7 | TCTTGAATGCATATTCAAGA | ||
| Shewanella denitrificans OS217 | Sden_1230 | -59 | 5 | ACTTGAATGAATGTTCAAAT |
| -32 | 7.2 | TCTTGAATGCACATTCAAGA | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_1089 | -62 | 5.6 | ACTTGAATGTGCATTCAATT |
| -34 | 7 | TCTTGAATGCATATTCAAGA | ||
| Shewanella amazonensis SB2B | Sama_2407 | -86 | 5.7 | TTTTGAATGTATGTTCAAAA |
| -62 | 6.8 | TCTTGAATGTATGTTCAAGA | ||
| -35 | 5.2 | TTTTGAATGCCTGTTCAAAA | ||
| Shewanella loihica PV-4 | Shew_3098 | -84 | 5.8 | TTTTGAATGAACGTTCAAAA |
| -33 | 6.7 | TCTTGAACGCTCATTCAAGA | ||
| Shewanella piezotolerans WP3 | swp_0975 | -84 | 5.5 | TTTTGAATGTTTGTTCAAAA |
| -60 | 5 | ACTTGAATGATTATTCAAAT | ||
| -33 | 7 | TCTTGAATGTTCATTCAAGA | ||
| Shewanella sediminis HAW-EB3 | Ssed_3644 | -84 | 5.5 | TTTTGAATGTTTGTTCAAAA |
| -60 | 5 | ACTTGAATGATCGTTCAAAT | ||
| -33 | 7 | TCTTGAATGAACATTCAAGA | ||
| Shewanella woodyi ATCC 51908 | Swoo_4055 | -84 | 5.5 | TTTTGAATGTTTGTTCAAAA |
| -60 | 5 | ACTTGAATGATCGTTCAAAT | ||
| -33 | 7 | TCTTGAATGAACATTCAAGA | ||