Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of MalR regulog to Shewanella oneidensis MR-1

Reference regulog properties
Source regulog: MalR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Maltodextrin utilization
Effector: Maltose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella oneidensis MR-1
Orthologous TF(s) SO2244
Regulated genes 2
Built upon 67 sites [see more]
Predicted regulatory interactions in Shewanella oneidensis MR-1
Locus tag Position Score Sequence
Position: -202
Score: 6.1
Sequence: ATTGAATACGTATGCACA
Locus tag: SO2162
SO2162 -202 6.1 ATTGAATACGTATGCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp(Mal)
Ortholog function: Predicted maltose-specific TonB-dependent receptor
Shewanella oneidensis MR-1 SO_2162 -351 6.2 CCTGCATACGTATGCAAA
-202 6.1 ATTGAATACGTATGCACA
Shewanella sp ANA-3 Shewana3_2312 -353 6.2 CCTGCATACGTATGCAAA
-204 6.1 ATTGAATACGTATGCACA
Shewanella sp MR-4 Shewmr4_2134 -353 6.2 CCTGCATACGTATGCAAA
-204 6.1 ATTGAATACGTATGCACA
Shewanella sp MR-7 Shewmr7_2210 -353 6.2 CCTGCATACGTATGCAAA
-204 6.1 ATTGAATACGTATGCACA
Shewanella baltica OS155 Sbal_2288 -350 6.2 CCTGCATACGTATGCAGA
-201 6 ATTGAATACGTATGCACT
Shewanella amazonensis SB2B Sama_1661 -356 6.1 GCTGCATACGTATGCACA
-206 6.1 TTTGAATACGTATGCACT
Shewanella loihica PV-4 Shew_1888 -343 6.2 ACTGCATACGTATGCAAA
-192 6.1 TTTGAATACGTATGCATA
Shewanella piezotolerans WP3 swp_2671 -336 5.9 TCTGCATACGTATGTAAT
-187 6.1 ATTGAATACGTATGCATA
Position: -90
Score: 5.4
Sequence: GTGGAATACGTATGCAAG
Locus tag: SO2450
SO2450 -90 5.4 GTGGAATACGTATGCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: susB
Ortholog function: Alpha-glucosidase (EC 3.2.1.20)
Shewanella oneidensis MR-1 SO_2450 -90 5.4 GTGGAATACGTATGCAAG
Shewanella sp ANA-3 Shewana3_1931 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-4 Shewmr4_1876 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-7 Shewmr7_2102 -90 6 GGTGAATACGTATGCAAA
Shewanella baltica OS155 Sbal_2329 -90 5.9 GGTGAATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2002 -100 5.7 CCTGAATACGTATGTAGT
Shewanella frigidimarina NCIMB 400 Sfri_1777 -92 6.1 ACTGAATACGTATGCAAA
Shewanella amazonensis SB2B Sama_1108 -89 6 GCTGAATACGTATGCAGC
Shewanella loihica PV-4 Shew_1876 -164 5.9 GGTGAATACGTATGCAGC
Shewanella piezotolerans WP3 swp_2676 -111 6.1 TTTGAATACGTATGCAAG