Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ManR2 regulog to Shewanella amazonensis SB2B

Reference regulog properties
Source regulog: ManR2 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Mannose utilization; Mannosides utilization
Effector: Mannose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella amazonensis SB2B
Orthologous TF(s) Sama_0294
Regulated genes 3
Built upon 5 sites [see more]
Predicted regulatory interactions in Shewanella amazonensis SB2B
Locus tag Position Score Sequence
Position: -90
Score: 6.7
Sequence: AAATGTAATCGATTACAGTG
Locus tag: Sama_0293
Sama_0293 -90 6.7 AAATGTAATCGATTACAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mnnA3
Ortholog function: Alpha-1,2-mannosidase
Shewanella amazonensis SB2B Sama_0293 -184 6.3 AGATGTAATCGATTCCATAA
-90 6.7 AAATGTAATCGATTACAGTG
Position: -220
Score: 6.7
Sequence: CACTGTAATCGATTACATTT
Locus tag: Sama_0294
Sama_0294 -220 6.7 CACTGTAATCGATTACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: manR2
Ortholog function: Transcriptional regulator of mannoside utilization, variant 2, LacI family
Shewanella amazonensis SB2B Sama_0294 -220 6.7 CACTGTAATCGATTACATTT
-126 6.3 TTATGGAATCGATTACATCT
Position: -149
Score: 6.8
Sequence: CAATGTAATCGATTACATTA
Locus tag: Sama_0295
Sama_0295 -149 6.8 CAATGTAATCGATTACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp(Man)
Ortholog function: Mannosides-regulated TonB-dependent outer membrane receptor
Shewanella amazonensis SB2B Sama_0295 -149 6.8 CAATGTAATCGATTACATTA