Propagation of LexA regulog to Marinobacter aqueolei
| Source regulog: | LexA - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Marinobacter aqueolei |
| Orthologous TF(s) | Maqu_2007 |
| Regulated genes | 8 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -34
Score: 6.2 Sequence: TACTGTATATATAAACAGTA
Locus tag: Maqu_0975
|
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| Maqu_0975 | -34 | 6.2 | TACTGTATATATAAACAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: imuA | ||||
| Ortholog function: Predicted RecA/RadA recombinase | ||||
| Shewanella amazonensis SB2B | Sama_1865 | -66 | 5.9 | TACTGTATAAATATACAGTT |
| Shewanella loihica PV-4 | Shew_2102 | -145 | 6.1 | TACTGTATTTATATACAGTG |
|
Position: -33
Score: 5.9 Sequence: TACTGTATATTCAAACAGTA
Locus tag: Maqu_1208
|
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| Maqu_1208 | -33 | 5.9 | TACTGTATATTCAAACAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: umuD | ||||
| Ortholog function: DNA polymerase V, subunit UmuD | ||||
| Shewanella sp W3-18-1 | Sputw3181_1083 | -46 | 5.9 | TACTGTATAAACAAACAGTA |
|
Position: -42
Score: 5.4 Sequence: CACTGTATAAAAAAACAGGA
Locus tag: Maqu_2007
|
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| Maqu_2007 | -42 | 5.4 | CACTGTATAAAAAAACAGGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lexA | ||||
| Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88) | ||||
| Shewanella oneidensis MR-1 | SO_4603 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella putrefaciens CN-32 | Sputcn32_3780 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella sp W3-18-1 | Sputw3181_0135 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella sp ANA-3 | Shewana3_3989 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella sp MR-4 | Shewmr4_3789 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella sp MR-7 | Shewmr7_3862 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella baltica OS155 | Sbal_0156 | -45 | 5.9 | TACTGTATATACTAACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella denitrificans OS217 | Sden_3515 | -45 | 5.1 | TACTGTATATAATGACAGTC |
| -26 | 5.1 | CACTGTATAAAAAGACAGGA | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_0260 | -45 | 5 | CACTGTATATAATGACAGTC |
| -26 | 5.1 | CACTGTATAAAAAGACAGGA | ||
| Shewanella amazonensis SB2B | Sama_3481 | -45 | 5.6 | TACTGTATATACTGACAGTA |
| -26 | 5 | AACTGTATAGAAAAACAGGA | ||
| Shewanella loihica PV-4 | Shew_0127 | -45 | 4.9 | TACTGTATATACTGACAGGT |
| -26 | 4.8 | TACTGTATGGAAAGACAGGA | ||
| Shewanella pealeana ATCC 700345 | Spea_3997 | -45 | 5.2 | TACTGTATATACTAACAGGT |
| -26 | 4.9 | TACTGTATAGAAAGACAGGG | ||
| Shewanella halifaxensis HAW-EB4 | Shal_0260 | -45 | 4.9 | TACTGTATATACTGACAGGT |
| -26 | 4.9 | TACTGTATAGAAAGACAGGG | ||
| Shewanella piezotolerans WP3 | swp_4821 | -45 | 5.2 | TACTGTATATACTAACAGGT |
| -26 | 5 | TACTGTATAGAAAAACAGGT | ||
| Shewanella sediminis HAW-EB3 | Ssed_0200 | -45 | 5.6 | TACTGTATATACTAACAGTT |
| -26 | 5 | TACTGTATAGAAAGACAGGA | ||
| Shewanella woodyi ATCC 51908 | Swoo_0180 | -45 | 5.3 | TACTGTATATACTGACAGTT |
| -26 | 5 | TACTGTATAGAAAGACAGGA | ||
|
Position: -62
Score: 5.6 Sequence: CACTGTATGAAAAAACAGTA
Locus tag: Maqu_3364
|
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| Maqu_3364 | -62 | 5.6 | CACTGTATGAAAAAACAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recN | ||||
| Ortholog function: DNA repair protein RecN | ||||
| Shewanella oneidensis MR-1 | SO_3462 | -72 | 5.8 | TACTGTATATAAAATCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella putrefaciens CN-32 | Sputcn32_2771 | -72 | 5.8 | TACTGTATATAAAATCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella sp W3-18-1 | Sputw3181_1241 | -72 | 5.8 | TACTGTATATAAAATCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella sp ANA-3 | Shewana3_1104 | -72 | 5.9 | TACTGTATATAAATTCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella sp MR-4 | Shewmr4_1104 | -72 | 5.9 | TACTGTATATAAATTCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella sp MR-7 | Shewmr7_1170 | -72 | 5.9 | TACTGTATATAAATTCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella baltica OS155 | Sbal_3153 | -72 | 5.8 | TACTGTATATAAAATCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella denitrificans OS217 | Sden_1151 | -71 | 5.4 | TACTGTATAAAAAACCAGTG |
| -49 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_1043 | -72 | 5.8 | TACTGTATATAAAATCAGTA |
| -50 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella amazonensis SB2B | Sama_1026 | -73 | 5.4 | TACTGTACAAAAAATCAGTA |
| -51 | 5.3 | TACTGTGTATCAATACAGTA | ||
| Shewanella loihica PV-4 | Shew_1196 | -62 | 5.7 | TACTGTATAAAAATTCAGTA |
| -40 | 4.9 | TACTGTGCATGAATACAGTA | ||
| Shewanella pealeana ATCC 700345 | Spea_1169 | -62 | 5.9 | TACTGTATGAATAAACAGTA |
| -40 | 5.3 | TACTGTTTAACCATACAGTG | ||
| Shewanella halifaxensis HAW-EB4 | Shal_1212 | -62 | 5.8 | TACTGTATAGATAAACAGTA |
| -40 | 5.5 | TACTGTTTAACTATACAGTG | ||
| Shewanella piezotolerans WP3 | swp_1346 | -61 | 5.7 | TACTGTATAGAAAAACAGTA |
| -39 | 5.6 | TACTGTTTATCAATACAGTG | ||
| Shewanella sediminis HAW-EB3 | Ssed_1281 | -62 | 5.8 | TACTGTATATAAAATCAGTA |
| -40 | 5.5 | TACTGTTTAAAAACACAGTA | ||
| Shewanella woodyi ATCC 51908 | Swoo_3359 | -64 | 5.9 | TACTGTATTTATGAACAGTA |
| -42 | 5.9 | TACTGTTCATAAATACAGTA | ||