Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing umuD gene

Properties
Regulog: LexA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 192 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -30
Score: 5.64231
Sequence: TGCTGTATATAATTACAGTG
Locus tag: Sbal_3554
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Sbal_3553
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -30 5.6 TGCTGTATATAATTACAGTG Sbal_3554
Shewanella denitrificans OS217
Position: -29
Score: 5.9556
Sequence: TACTGTATATAATTACAGTG
Locus tag: Sden_3236
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Sden_3235
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -29 6 TACTGTATATAATTACAGTG Sden_3236
Shewanella frigidimarina NCIMB 400
Position: -58
Score: 5.91351
Sequence: TACTGTTTATTTATACAGTG
Position: -43
Score: 4.80666
Sequence: CAGTGTGTTTTTATACAGTA
Locus tag: Sfri_1963
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Sfri_1964
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -58 5.9 TACTGTTTATTTATACAGTG Sfri_1963
-43 4.8 CAGTGTGTTTTTATACAGTA
Shewanella halifaxensis HAW-EB4
Position: -34
Score: 5.92564
Sequence: TACTGTATAAAAATACAGTG
Locus tag: Shal_2184
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Shal_2183
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -34 5.9 TACTGTATAAAAATACAGTG Shal_2184
Shewanella oneidensis MR-1
Position: -32
Score: 5.63726
Sequence: AACTGTATATTTATACAGTT
Locus tag: SO_A0013
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: SO_A0012
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -32 5.6 AACTGTATATTTATACAGTT SO_A0013
Shewanella pealeana ATCC 700345
Position: -34
Score: 5.69919
Sequence: TACTGTATAAACATACAGTT
Locus tag: Spea_2196
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Spea_2195
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -34 5.7 TACTGTATAAACATACAGTT Spea_2196
Shewanella putrefaciens CN-32
Position: -32
Score: 5.44547
Sequence: AACTGTATATTTGTACAGTT
Locus tag: Sputcn32_0175
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
umuD -32 5.4 AACTGTATATTTGTACAGTT Sputcn32_0175
Shewanella sediminis HAW-EB3
Position: -39
Score: 6.14168
Sequence: TACTGTATATTTATACAGTA
Locus tag: Ssed_2172
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Ssed_2171
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -39 6.1 TACTGTATATTTATACAGTA Ssed_2172
Shewanella sp ANA-3
Position: 14
Score: 6.03457
Sequence: TACTGTATTTACATACAGTA
Locus tag: Shewana3_1833
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Shewana3_1832
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC 14 6 TACTGTATTTACATACAGTA Shewana3_1833
Shewanella sp MR-4
Position: 14
Score: 6.03306
Sequence: TACTGTACTTATATACAGTA
Locus tag: Shewmr4_1782
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
umuD 14 6 TACTGTACTTATATACAGTA Shewmr4_1782
Shewanella sp MR-7
Position: 14
Score: 6.22485
Sequence: TACTGTATTTATATACAGTA
Locus tag: Shewmr7_2195
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Shewmr7_2196
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC 14 6.2 TACTGTATTTATATACAGTA Shewmr7_2195
Shewanella sp W3-18-1
Position: -46
Score: 5.856
Sequence: TACTGTATAAACAAACAGTA
Locus tag: Sputw3181_1083
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Sputw3181_1082
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -46 5.9 TACTGTATAAACAAACAGTA Sputw3181_1083
Shewanella woodyi ATCC 51908
Position: -38
Score: 5.29774
Sequence: TACTGTATAAAAACACAGTT
Locus tag: Swoo_2465
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: Swoo_2466
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -38 5.3 TACTGTATAAAAACACAGTT Swoo_2465