Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Moritella sp. PE36

Reference regulog properties
Source regulog: LexA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Moritella sp. PE36
Orthologous TF(s) PE36_16374
Regulated genes 8
Built upon 192 sites [see more]
Predicted regulatory interactions in Moritella sp. PE36
Locus tag Position Score Sequence
Position: -35
Score: 5.2
Sequence: ATATGTTTATATATACAGTA
Locus tag: PE36_16064
PE36_16064 -35 5.2 ATATGTTTATATATACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recG
Ortholog function: ATP-dependent DNA helicase RecG (EC 3.6.1.-)
Shewanella oneidensis MR-1 SO_4364 -45 4.3 ATATGTATAAATTCACAGTG
Shewanella putrefaciens CN-32 Sputcn32_0450 -21 4.3 ATATGTATAAATTCACAGTG
Shewanella sp W3-18-1 Sputw3181_0304 -21 4.3 ATATGTATAAATTCACAGTG
Shewanella sp ANA-3 Shewana3_0348 -21 4.3 ATATGTATAAATTCACAGTG
Shewanella sp MR-4 Shewmr4_0354 -21 4.3 ATATGTATAAATTCACAGTG
Shewanella sp MR-7 Shewmr7_3672 -21 4.3 ATATGTATAAATTCACAGTG
Shewanella baltica OS155 Sbal_0346 -21 4.3 ATATGTATAAATTCACAGTG
Shewanella denitrificans OS217 Sden_3476 -36 4.8 ATATGTATAAATTTACAGTG
Shewanella frigidimarina NCIMB 400 Sfri_0356 -47 5.3 ATCTGTATATAATTACAGTG
Shewanella amazonensis SB2B Sama_3375 -36 4.4 ATATGTATAAATTCACAGTA
Shewanella loihica PV-4 Shew_3507 -71 5.1 ATATGTATATATTTACAGTA
Shewanella pealeana ATCC 700345 Spea_3884 -21 4.8 ATATGTATAAATTTACAGTG
Shewanella halifaxensis HAW-EB4 Shal_0385 -21 4.8 ATATGTATAAATTTACAGTG
Shewanella piezotolerans WP3 swp_0309 -21 4.8 ATATGTATAAATTTACAGTG
Shewanella sediminis HAW-EB3 Ssed_0329 -71 4.5 ATATGTATATAAACACAGTG
Shewanella woodyi ATCC 51908 Swoo_4592 -68 5 ATATGTATATAAATACAGTG
Position: -50
Score: 5
Sequence: TACTGTATATAATTACAAGA
Position: -30
Score: 5.2
Sequence: AACTGTATATAAAACCAGTT
Locus tag: PE36_16374
PE36_16374 -50 5 TACTGTATATAATTACAAGA
-30 5.2 AACTGTATATAAAACCAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Shewanella oneidensis MR-1 SO_4603 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella putrefaciens CN-32 Sputcn32_3780 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp W3-18-1 Sputw3181_0135 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp ANA-3 Shewana3_3989 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp MR-4 Shewmr4_3789 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp MR-7 Shewmr7_3862 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella baltica OS155 Sbal_0156 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella denitrificans OS217 Sden_3515 -45 5.1 TACTGTATATAATGACAGTC
-26 5.1 CACTGTATAAAAAGACAGGA
Shewanella frigidimarina NCIMB 400 Sfri_0260 -45 5 CACTGTATATAATGACAGTC
-26 5.1 CACTGTATAAAAAGACAGGA
Shewanella amazonensis SB2B Sama_3481 -45 5.6 TACTGTATATACTGACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella loihica PV-4 Shew_0127 -45 4.9 TACTGTATATACTGACAGGT
-26 4.8 TACTGTATGGAAAGACAGGA
Shewanella pealeana ATCC 700345 Spea_3997 -45 5.2 TACTGTATATACTAACAGGT
-26 4.9 TACTGTATAGAAAGACAGGG
Shewanella halifaxensis HAW-EB4 Shal_0260 -45 4.9 TACTGTATATACTGACAGGT
-26 4.9 TACTGTATAGAAAGACAGGG
Shewanella piezotolerans WP3 swp_4821 -45 5.2 TACTGTATATACTAACAGGT
-26 5 TACTGTATAGAAAAACAGGT
Shewanella sediminis HAW-EB3 Ssed_0200 -45 5.6 TACTGTATATACTAACAGTT
-26 5 TACTGTATAGAAAGACAGGA
Shewanella woodyi ATCC 51908 Swoo_0180 -45 5.3 TACTGTATATACTGACAGTT
-26 5 TACTGTATAGAAAGACAGGA
Position: -45
Score: 5.5
Sequence: AACTGTATAAATAAACAGTT
Locus tag: PE36_18940
PE36_18940 -45 5.5 AACTGTATAAATAAACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuD
Ortholog function: DNA polymerase V, subunit UmuD
Shewanella oneidensis MR-1 SO_A0013 -32 5.6 AACTGTATATTTATACAGTT
Shewanella putrefaciens CN-32 Sputcn32_0175 -32 5.4 AACTGTATATTTGTACAGTT
Shewanella baltica OS155 Sbal_3554 -30 5.6 TGCTGTATATAATTACAGTG
Shewanella frigidimarina NCIMB 400 Sfri_1963 -58 5.9 TACTGTTTATTTATACAGTG
-43 4.8 CAGTGTGTTTTTATACAGTA
Shewanella pealeana ATCC 700345 Spea_2196 -34 5.7 TACTGTATAAACATACAGTT
Shewanella halifaxensis HAW-EB4 Shal_2170 -35 5.7 TACTGTACAAATATACAGTT
Shewanella halifaxensis HAW-EB4 Shal_2184 -34 5.9 TACTGTATAAAAATACAGTG
Shewanella woodyi ATCC 51908 Swoo_2465 -38 5.3 TACTGTATAAAAACACAGTT
Position: -68
Score: 5.5
Sequence: TACTGTATGAACGAACAGTA
Locus tag: PE36_23016
PE36_23016 -68 5.5 TACTGTATGAACGAACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Shewanella oneidensis MR-1 SO_3430 -127 5.6 TACTGTATGATTGTACAGTA
Shewanella putrefaciens CN-32 Sputcn32_2747 -129 5.6 TACTGTATGATTGTACAGTA
Shewanella sp W3-18-1 Sputw3181_1265 -129 5.6 TACTGTATGATTGTACAGTA
Shewanella sp ANA-3 Shewana3_1126 -128 5.6 TACTGTATGATTGTACAGTA
Shewanella sp MR-4 Shewmr4_1125 -128 5.6 TACTGTATGATTGTACAGTA
Shewanella sp MR-7 Shewmr7_1196 -128 5.6 TACTGTATGATTGTACAGTA
Shewanella baltica OS155 Sbal_3117 -127 5.6 TACTGTATGATTGTACAGTA
Shewanella denitrificans OS217 Sden_1208 -203 5.8 TACTGTATGATTATACAGTA
Shewanella frigidimarina NCIMB 400 Sfri_1062 -113 5.5 TACTGTATGACTATACAGTA
Shewanella amazonensis SB2B Sama_1046 -115 5.6 TACTGTATGATTGTACAGTA
Shewanella loihica PV-4 Shew_1215 -127 5.6 TACTGTATGATTGTACAGTA
Shewanella pealeana ATCC 700345 Spea_1195 -124 5.6 TACTGTATGATTGTACAGTA
Shewanella halifaxensis HAW-EB4 Shal_1232 -124 5.6 TACTGTATGATTGTACAGTA
Shewanella piezotolerans WP3 swp_1366 -123 5.6 TACTGTATGATTGTACAGTA
Shewanella sediminis HAW-EB3 Ssed_1300 -135 5.6 TACTGTATGATTGTACAGTA
Shewanella woodyi ATCC 51908 Swoo_3340 -124 5.5 TACTGTATGACTATACAGTA
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