Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrdR regulog to Psychromonas sp. CNPT3

Reference regulog properties
Source regulog: NrdR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Psychromonas sp. CNPT3
Orthologous TF(s) PCNPT3_05664
Regulated genes 1
Built upon 64 sites [see more]
Predicted regulatory interactions in Psychromonas sp. CNPT3
Locus tag Position Score Sequence
Position: -70
Score: 4.4
Sequence: TATCTATATGTAGTGT
Position: -38
Score: 5.1
Sequence: CCACAAGATGTAGTGT
Locus tag: PCNPT3_10895
PCNPT3_10895 -70 4.4 TATCTATATGTAGTGT
-38 5.1 CCACAAGATGTAGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Shewanella oneidensis MR-1 SO2834 -79 4.3 TGCCTACATATTGTGT
-48 5.2 TCACTATATGTAGTGT
Shewanella putrefaciens CN-32 Sputcn32_1540 -79 4.4 ACGCTATATATTGTGC
-48 5.2 TCACTATATGTAGTGT
Shewanella sp W3-18-1 Sputw3181_2559 -79 4.4 ACGCTATATATTGTGC
-48 5.2 TCACTATATGTAGTGT
Shewanella sp ANA-3 Shewana3_2603 -79 4.3 TGCCTAGATATTGTGT
-48 5 GCACTATATGTAGTGT
Shewanella sp MR-4 Shewmr4_2441 -79 4.4 TGCCTAGATATAGTGT
-48 5.5 ACACTATATGTAGTGT
Shewanella sp MR-7 Shewmr7_2511 -79 4.4 TGCCTACATATAGTGT
-48 5.5 ACACTATATGTAGTGT
Shewanella baltica OS155 Sbal_1665 -80 4.4 GCTCTACATATTGTGT
-49 5 TCACTAGATGTAGTGT
Shewanella denitrificans OS217 Sden_1419 -124 4.1 GCACAGCATATTGTGT
-93 3.6 AgtCTATATgTAGatT
Shewanella frigidimarina NCIMB 400 Sfri_2443 -64 4.7 ACACTCTATCTTGTGT
-33 4 GCGCTATATATAGTGC
Shewanella amazonensis SB2B Sama_1275 -72 4.6 ACACTACATTTTGTAT
-41 4.1 GCTCAACATATAGTGA
Shewanella loihica PV-4 Shew_2449 -80 4.3 GCGCTACATATTGTGT
-49 5.2 ACACTATATATGGTGT
Shewanella pealeana ATCC 700345 Spea_2619 -81 3.6 gCgCcAcATATtGTGa
-50 5.1 GCACTATATATAGTGT
Shewanella halifaxensis HAW-EB4 Shal_2692 -81 4.1 ACGCCACATATTGTGA
-50 5.1 GCACTATATATAGTGT
Shewanella piezotolerans WP3 swp_3165 -80 3.6 gCgCcAcATATtGTGa
-49 5.3 ATACTATATGTAGTGT
Shewanella sediminis HAW-EB3 Ssed_1600 -80 4.2 ACGCAACATATTGTGC
-49 5.1 ACACTATATGTGGTGT
Shewanella woodyi ATCC 51908 Swoo_3049 -80 4.2 ACGCAACATATTGTGC
-49 5.1 ACACTATATGTGGTGT