Regulons of Hyphomonas neptunium ATCC 15444

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	10	10
TF	HrcA	Heat shock	Heat shock response	1	1
TF	HutC	cis-Urocanic acid	Histidine utilization	3	2
TF	LexA	DNA damage	SOS response	11	7
TF	LiuR		Branched-chain amino acid degradation	6	7
TF	MerR	Mercury ion, (Hg2+)	Mercury resistance	1	1
TF	NadQ		NAD biosynthesis	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	2
TF	NsrR	Nitric oxide	Nitrosative stress response	5	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	6	3
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	2	1
TF	SoxR	Paraquat	Superoxide stress response	2	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	3	2
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	1	1
RNA	SAM_alpha	S-adenosylmethionine	Methionine biosynthesis	3	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	1
RNA	mini-ykkC		Multidrug resistance	1	1
RNA	serC		Serine biosynthesis	2	1
RNA	yybP-ykoY			1	1

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --