Regulons of Hyphomonas neptunium ATCC 15444
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
1 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
10 |
10 |
| TF |
HrcA |
Heat shock |
Heat shock response |
1 |
1 |
| TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
3 |
2 |
| TF |
LexA |
DNA damage |
SOS response |
11 |
7 |
| TF |
LiuR |
|
Branched-chain amino acid degradation |
6 |
7 |
| TF |
MerR |
Mercury ion, (Hg2+) |
Mercury resistance |
1 |
1 |
| TF |
NadQ |
|
NAD biosynthesis |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
3 |
2 |
| TF |
NsrR |
Nitric oxide |
Nitrosative stress response |
5 |
2 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
6 |
3 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
2 |
1 |
| TF |
SoxR |
Paraquat |
Superoxide stress response |
2 |
2 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
2 |
1 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
3 |
2 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
1 |
2 |
| RNA |
MOCO_RNA_motif |
Molybdenum |
Molybdopterin biosynthesis; Molybdenum homeostasis |
1 |
1 |
| RNA |
SAM_alpha |
S-adenosylmethionine |
Methionine biosynthesis |
3 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
4 |
1 |
| RNA |
mini-ykkC |
|
Multidrug resistance |
1 |
1 |
| RNA |
serC |
|
Serine biosynthesis |
2 |
1 |
| RNA |
yybP-ykoY |
|
|
1 |
1 |
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Regulated Genes
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