Profile of regulator RhaR in Thermotogales
Properties
| Regulator family: |
DeoR |
| Regulation mode: |
repressor |
| Biological process: |
Rhamnose utilization; Rhamnose oligosaccharides utilization |
| Effector: |
Rhamnose |
| Regulog: |
RhaR - Thermotogales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Thermotoga maritima MSB8
|
|
TM1070 |
rhaM2 |
-56 |
6.7 |
TTGTGATTAATTTATGATAA |
|
TM1067 |
rtpE |
-74 |
6.1 |
TGTTGATATTATATTGATAA |
|
TM1069 |
rhaR |
-71 |
4.4 |
TTATCATAAATTAATCACAA |
|
Thermotoga neapolitana DSM 4359
|
|
CTN_1499 |
rhaM2 |
-57 |
6.7 |
TTGTGATTAATTTATGATAA |
|
CTN_1502 |
rtpE |
-54 |
5.6 |
TATTGATACTATATTGATAG |
|
CTN_1500 |
rhaR |
-72 |
4.4 |
TTATCATAAATTAATCACAA |
|
Thermotoga petrophila RKU-1
|
|
Tpet_1674 |
rhaM2 |
-56 |
6.7 |
TTGTGATTAATTTATGATAA |
|
Tpet_1677 |
rtpE |
-78 |
5.7 |
AGTTGATATCATATTGATAA |
|
Tpet_1682 |
ramA |
-47 |
5.3 |
TTATGATAAATTTATGATCG |
|
Tpet_1675 |
rhaR |
-29 |
4.4 |
TTATCATAAATTAATCACAA |
|
Thermotoga naphthophila RKU-10
|
|
Tnap_1697 |
rhaM2 |
-57 |
6.7 |
TTGTGATTAATTTATGATAA |
|
Tnap_1699 |
Tnap_1699 |
-42 |
5.7 |
ATTAGATAAATTTATGATAA |
|
Tnap_1698 |
rhaR |
-72 |
4.4 |
TTATCATAAATTAATCACAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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