Profile of regulator MsmR in Bifidobacteriaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
|
| Biological process: |
Carbohydrate metabolism |
| Effector: |
|
| Regulog: |
MsmR - Bifidobacteriaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bifidobacterium longum subsp. infantis ATCC 15697
|
|
Blon_0042 |
msmR |
-162 |
5.7 |
TTAGTGAAACGTTTCGACGA |
|
Blon_0042 |
msmR |
-149 |
5.5 |
TCGACGAAACGATTCGATAA |
|
Blon_0043 |
msmE |
-196 |
6 |
TAATCGAAACGATTCGAAAG |
|
Blon_0043 |
msmE |
-108 |
6.1 |
TCGTCGAAACGTTTCGAAAA |
|
Bifidobacterium adolescentis ATCC 15703
|
|
BAD_1584 |
msmR |
-70 |
5.9 |
TAAGTGAAACGTTTCGACGA |
|
BAD_1584 |
msmR |
-57 |
5.5 |
TCGACGAAACGATTCGATAA |
|
BAD_1585 |
msmE |
-186 |
6.7 |
TAATCGAAACGTTTCAATGA |
|
BAD_1585 |
msmE |
-78 |
6 |
TCATCGAAACGTTTCAATAC |
|
Bifidobacterium angulatum DSM 20098
|
|
BIFANG_01794 |
msmR |
-132 |
5.9 |
TAAGTGAAACGTTTCGACGA |
|
BIFANG_01794 |
msmR |
-119 |
5.2 |
TCGACGAAACGATTCGACAA |
|
BIFANG_01793 |
msmE |
-168 |
5.5 |
AAATCGAAACGATTCGATAT |
|
BIFANG_01793 |
msmE |
-85 |
7 |
TAATCGAAACGTTTCAATTA |
|
Bifidobacterium dentium Bd1
|
|
BDP_2166 |
msmR |
-71 |
6.3 |
TTATTGAAACGTTTCGACGA |
|
BDP_2166 |
msmR |
-58 |
5.7 |
TCGACGAAACGATTCGATTA |
|
BDP_2164 |
msmF |
-242 |
6.5 |
TAATCGAAACGTTTCAACAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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