Profile of regulator XosR in Bifidobacteriaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
|
| Biological process: |
Xylooligosacharides utilization |
| Effector: |
|
| Regulog: |
XosR - Bifidobacteriaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bifidobacterium adolescentis ATCC 15703
|
|
BAD_0425 |
xosA |
-275 |
5.7 |
TTTTCGAAACTTTCGATAT |
|
BAD_0425 |
xosA |
-141 |
5.4 |
AAATGGAAATTTTCGAAGG |
|
BAD_0424 |
xosR |
-57 |
5.7 |
AAACCGAAACTTTCGTTCG |
|
BAD_0424 |
xosR |
-80 |
5.7 |
ATATCGAAAGTTTCGAAAA |
|
BAD_0424 |
xosR |
-214 |
5.4 |
CCTTCGAAAATTTCCATTT |
|
BAD_0425 |
xosA |
-298 |
5.7 |
CGAACGAAAGTTTCGGTTT |
|
Bifidobacterium angulatum DSM 20098
|
|
BIFANG_00034 |
xosR |
-57 |
5.7 |
AAACCGAAACTTTCGTTCG |
|
BIFANG_00034 |
xosR |
-214 |
5.4 |
CCTTCGAAAATTTCCATTT |
|
BIFANG_00034 |
xosR |
-80 |
5.7 |
ATATCGAAAGTTTCGAAAA |
|
BIFANG_00032 |
xosA |
-318 |
5.7 |
CGAACGAAAGTTTCGGTTT |
|
BIFANG_00032 |
xosA |
-161 |
5.4 |
AAATGGAAATTTTCGAAGG |
|
BIFANG_00032 |
xosA |
-295 |
5.7 |
TTTTCGAAACTTTCGATAT |
|
Bifidobacterium dentium Bd1
|
|
BDP_0563 |
xosR |
-79 |
5.7 |
AATCCGAAAGTTTCGAAAT |
|
BDP_0563 |
xosR |
-56 |
5.7 |
AATTCGAAACTTTCGCTCT |
|
BDP_0565 |
xosA |
-65 |
5.3 |
CTTTCGAAGCTTTCGTTCT |
|
BDP_0565 |
xosA |
-306 |
5.7 |
ATTTCGAAACTTTCGGATT |
|
BDP_0565 |
xosA |
-329 |
5.7 |
AGAGCGAAAGTTTCGAATT |
|
Bifidobacterium gallicum DSM 20093
|
|
BIFGAL_00972 |
xosR |
-17 |
5.9 |
ACTACGAAAGTTTCGATAT |
|
BIFGAL_00973 |
xosA |
-327 |
5.9 |
ATATCGAAACTTTCGTAGT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
