Profile of regulator FnrN in Sphingomonadales
Properties
| Regulator family: |
CRP |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Oxidative stress response; Nitrogen fixation |
| Effector: |
Oxygen |
| Regulog: |
FnrN - Sphingomonadales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Erythrobacter sp. NAP1
|
|
NAP1_15803 |
ccoN |
-72 |
4.6 |
AACTTGATCTGAGTCAAACA |
|
NAP1_15793 |
ompW |
-238 |
5.7 |
GCATTGACCTGGATCAATGC |
|
NAP1_15848 |
hemN |
-52 |
5.3 |
GATTTGATCTGGCGCAAAGA |
|
NAP1_15798 |
fnrN |
-3 |
5.7 |
GCATTGATCCAGGTCAATGC |
|
NAP1_01820 |
uspA |
-70 |
5.5 |
AAATTGATCTGGATCAATGC |
|
Novosphingobium aromaticivorans DSM 12444
|
|
Saro_2578 |
ccoN |
-144 |
4.6 |
ACATTGACGGAGCGCAAAAA |
|
Saro_2578 |
ccoN |
-77 |
4.9 |
TATTTGACAAGGGTCAATGT |
|
Saro_2579 |
ompW |
-179 |
4.9 |
ACATTGACCCTTGTCAAATA |
|
Saro_2579 |
ompW |
-112 |
4.6 |
TTTTTGCGCTCCGTCAATGT |
|
Saro_2581 |
fnrN |
-232 |
4.6 |
GTTTTGACATCCGTCAACGC |
|
Saro_2569 |
hemN |
-68 |
4.9 |
AATTTGCCATATCTCAATGC |
|
Saro_0571 |
uspA |
-71 |
4.3 |
AATTTGACGTGGATCATGGT |
|
Sphingobium japonicum UT26S
|
|
SJA_C2-00670 |
ccoN |
-74 |
5.5 |
GCTTTGACAGAGGTCAATGC |
|
SJA_C2-00650 |
ompW |
-103 |
5.4 |
ACATTGAGCCAGGTCAAATT |
|
SJA_C2-00650 |
ompW |
-81 |
4.5 |
CGGTTGCGCGGGATCAATGC |
|
SJA_C2-00660 |
fnrN |
10 |
4.6 |
GATTTGATCTGGCGCAAAAG |
|
Sphingomonas wittichii RW1
|
|
Swit_1801 |
ccoN |
-200 |
5.1 |
GATTTGATCTGGCGCAAGGC |
|
Sphingopyxis alaskensis RB2256
|
|
Sala_1676 |
ccoN |
-112 |
4.6 |
GCATTGATGGAGCGCAAGCA |
|
Sala_1676 |
ccoN |
-90 |
5.3 |
TCGTTGATCCCGGTCAATGT |
|
Sala_1677 |
ompW |
-97 |
5.3 |
ACATTGACCGGGATCAACGA |
|
Sala_1677 |
ompW |
-75 |
4.6 |
TGCTTGCGCTCCATCAATGC |
|
Sala_1679 |
uspA |
-69 |
4.8 |
GATTTGATGCGAATCAATGA |
|
Sala_1668 |
hemN |
-51 |
4.8 |
CCGTTGATGCCGATCAATGC |
Export
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Regulatory Sites
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