Profile of regulator HcpR in Clostridia-1
Properties
| Regulator family: |
CRP |
| Regulation mode: |
activator |
| Biological process: |
Nitrosative stress response |
| Effector: |
Nitric oxide |
| Regulog: |
HcpR - Clostridia-1 |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Clostridium acetobutylicum ATCC 824
|
|
CAC0758 |
null |
-133 |
4.6 |
TCGTAACGAAGGATACCG |
|
CA_C3428 |
hcp |
-107 |
5.8 |
TAGTAACCAATGTTACAG |
|
CAC0885 |
frdX |
-101 |
5.9 |
GTGTAACATATGTTACTG |
|
CAC0884 |
hcpR |
-40 |
5.9 |
CAGTAACATATGTTACAC |
|
CA_C2750 |
hcp |
-88 |
5.8 |
AAGTAACAATTGTTACGG |
|
CAC0362 |
Cbei_4355 |
-83 |
5.9 |
TAGTAACATAAGTTACAG |
|
Clostridium butyricum 5521
|
|
CBY_3927 |
null |
-98 |
6.2 |
CTGTAACTTATGTTACAG |
|
Clostridium beijerincki NCIMB 8052
|
|
Cbei_1845 |
null |
-178 |
5.2 |
TTGTATCATATGTTACGT |
|
Cbei_1434 |
hcp |
-223 |
5.5 |
GCGTAACCATTGTTACAG |
|
Cbei_1434 |
hcp |
-128 |
5.8 |
TAGTAACGTATGTTACAG |
|
Cbei_2276 |
hcp |
-126 |
5.2 |
TAGTAACGTGTGTTACAG |
|
Cbei_4355 |
Cbei_4355 |
-82 |
5.8 |
TTGTAACTTTTGTTACAT |
|
Clostridium botulinum A str. ATCC 3502
|
|
CBO1658 |
null |
-143 |
5 |
GAGTAACATCCGTTACAG |
|
CBO2922 |
frdX |
-77 |
5.9 |
TGGTAACATTAGTTACAG |
|
CBO2923 |
hcpR |
-45 |
5.9 |
CTGTAACTAATGTTACCA |
|
CBO2792 |
hcp |
-122 |
6 |
TTGTAACATAGGTTACAG |
|
CBO2926 |
null |
-110 |
5.7 |
TAGTAACATTAGTTACTG |
|
Clostridium kluyveri DSM 555
|
|
CKL_0935 |
hcp |
-100 |
4.8 |
TCGTATCCTAAGTTACCG |
|
CKL_2419 |
frdX |
-74 |
5.5 |
GTGTAACGTAAGTTACAG |
|
CKL_2420 |
hcpR |
-67 |
5.5 |
CTGTAACTTACGTTACAC |
|
Clostridium novyi NT
|
|
NT01CX_0589 |
frdX |
-89 |
5.5 |
TGGTAACTTAGGTTACAT |
|
NT01CX_0590 |
hcpR |
-63 |
5.5 |
ATGTAACCTAAGTTACCA |
|
NT01CX_0591 |
hcp |
-100 |
5.8 |
TGGTAACATAAGTTACAT |
|
Clostridium perfringens ATCC 13124
|
|
CPF_1730 |
null |
-75 |
5.9 |
AGGTAACCTATGTTACAG |
|
CPF_2909 |
hcp |
-141 |
5.6 |
AGGTAACTTTAGTTACCG |
|
Clostridium tetani E88
|
|
CTC01608 |
null |
-79 |
5.7 |
TGGTAACTAATGTTACAT |
|
CTC00410 |
hcp |
-106 |
6.1 |
TTGTAACATTTGTTACCG |
|
CTC01972 |
frdX |
-93 |
5.6 |
ACGTAACATTCGTTACAG |
|
CTC00896 |
hcpR |
-20 |
5.4 |
CAGTAACCATAGTTACTA |
|
CTC00439 |
null |
-108 |
5.9 |
TAGTAACATAAGTTACAG |
|
CTC00897 |
null |
-98 |
5.4 |
TAGTAACTATGGTTACTG |
|
CTC02534 |
Cbei_4355 |
-73 |
5.4 |
TCGTAACATACGTTACTT |
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