Profile of regulator SO3277 in Shewanellaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Multidrug resistance |
| Effector: |
|
| Regulog: |
SO3277 - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_3277 |
SO3277 |
-122 |
6.1 |
ACTGGACTGTCTAGTCCATT |
|
SO_3277 |
SO3277 |
-150 |
6.5 |
ACTAGACTTGCTAGTCTAGT |
|
SO_3278 |
SO3278 |
-60 |
6.5 |
ACTAGACTAGCAAGTCTAGT |
|
SO_3278 |
SO3278 |
-88 |
6.1 |
AATGGACTAGACAGTCCAGT |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_2634 |
SO3277 |
-98 |
5.6 |
ACTAGACTTGTTAGTCTAGA |
|
Sputcn32_2634 |
SO3277 |
-70 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Sputcn32_2635 |
SO3278 |
-60 |
5.6 |
TCTAGACTAACAAGTCTAGT |
|
Sputcn32_2635 |
SO3278 |
-88 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Shewanella sp W3-18-1
|
|
Sputw3181_1373 |
SO3277 |
-98 |
5.6 |
ACTAGACTTGTTAGTCTAGA |
|
Sputw3181_1373 |
SO3277 |
-70 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Sputw3181_1372 |
SO3278 |
-60 |
5.6 |
TCTAGACTAACAAGTCTAGT |
|
Sputw3181_1372 |
SO3278 |
-88 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Shewanella sp ANA-3
|
|
Shewana3_1297 |
SO3277 |
-97 |
6.5 |
ACTAGACTTGCTAGTCTAGT |
|
Shewana3_1296 |
SO3278 |
-60 |
6.5 |
ACTAGACTAGCAAGTCTAGT |
|
Shewana3_1296 |
SO3278 |
-88 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Shewana3_1297 |
SO3277 |
-69 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Shewanella sp MR-4
|
|
Shewmr4_1247 |
SO3277 |
-97 |
6.5 |
ACTAGACTTGCTAGTCTAGT |
|
Shewmr4_1247 |
SO3277 |
-69 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Shewmr4_1246 |
SO3278 |
-59 |
6.5 |
ACTAGACTAGCAAGTCTAGT |
|
Shewmr4_1246 |
SO3278 |
-87 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Shewanella sp MR-7
|
|
Shewmr7_1317 |
SO3277 |
-97 |
6.5 |
ACTAGACTTGCTAGTCTAGT |
|
Shewmr7_1316 |
SO3278 |
-60 |
6.5 |
ACTAGACTAGCAAGTCTAGT |
|
Shewmr7_1316 |
SO3278 |
-88 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Shewmr7_1317 |
SO3277 |
-69 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Shewanella baltica OS155
|
|
Sbal_2972 |
SO3277 |
-74 |
6.5 |
ACTAGACTTGCTAGTCTAGT |
|
Sbal_2972 |
SO3277 |
-46 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Sbal_2973 |
SO3278 |
-61 |
6.5 |
ACTAGACTAGCAAGTCTAGT |
|
Sbal_2973 |
SO3278 |
-89 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Shewanella denitrificans OS217
|
|
Sden_1279 |
SO3277 |
-95 |
6.8 |
ACTAGACTGTCCAGTCTATT |
|
Sden_1279 |
SO3277 |
-123 |
6 |
ACTAGACTACCAAGTCTATT |
|
Sden_1278 |
SO3278 |
-106 |
6 |
AATAGACTTGGTAGTCTAGT |
|
Sden_1278 |
SO3278 |
-134 |
6.8 |
AATAGACTGGACAGTCTAGT |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_1149 |
SO3277 |
-97 |
5.5 |
ACTAGACTCAGTAGTCTAGT |
|
Sfri_1149 |
SO3277 |
-69 |
6.8 |
ACTAGACTGTCCAGTCTATT |
|
Sfri_1148 |
SO3278 |
-137 |
5.5 |
ACTAGACTACTGAGTCTAGT |
|
Sfri_1148 |
SO3278 |
-165 |
6.8 |
AATAGACTGGACAGTCTAGT |
|
Shewanella amazonensis SB2B
|
|
Sama_2342 |
SO3278 |
-101 |
6.4 |
AATAGACTAGACAGTCCAGT |
|
Sama_2342 |
SO3278 |
-73 |
6.4 |
AATAGACTAGACAGTCCAGT |
|
Sama_2341 |
SO3277 |
-100 |
6.4 |
ACTGGACTGTCTAGTCTATT |
|
Sama_2341 |
SO3277 |
-72 |
6.4 |
ACTGGACTGTCTAGTCTATT |
|
Shewanella loihica PV-4
|
|
Shew_1312 |
SO3278 |
-64 |
5.6 |
ATTAGACTAACAAGTCTAGT |
|
Shew_1312 |
SO3278 |
-92 |
6.5 |
ACTAGACTAGACAGTCCAGT |
|
Shew_1313 |
SO3277 |
-70 |
6.5 |
ACTGGACTGTCTAGTCTAGT |
|
Shew_1313 |
SO3277 |
-98 |
5.6 |
ACTAGACTTGTTAGTCTAAT |
|
Shewanella pealeana ATCC 700345
|
|
Spea_1325 |
SO3278 |
-76 |
6 |
ACTAGACTAGACAGTCCAGC |
|
Spea_1325 |
SO3278 |
-104 |
7 |
ACTAGACTGGACAGTCTAGT |
|
Spea_1326 |
SO3277 |
-102 |
7 |
ACTAGACTGTCCAGTCTAGT |
|
Spea_1326 |
SO3277 |
-130 |
6 |
GCTGGACTGTCTAGTCTAGT |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_1388 |
SO3278 |
-105 |
6.5 |
AATGGACTGGACAGTCTAGT |
|
Shal_1389 |
SO3277 |
-109 |
6.5 |
ACTAGACTGTCCAGTCCATT |
|
Shal_1389 |
SO3277 |
-137 |
6.4 |
ACTAGACTGCCTAGTCTAGT |
|
Shal_1388 |
SO3278 |
-77 |
6.4 |
ACTAGACTAGGCAGTCTAGT |
|
Shewanella piezotolerans WP3
|
|
swp_1475 |
SO3278 |
-77 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
swp_1475 |
SO3278 |
-105 |
6.5 |
AATGGACTGGACAGTCTAGT |
|
swp_1476 |
SO3277 |
-100 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
swp_1476 |
SO3277 |
-72 |
6.5 |
ACTAGACTGTCCAGTCCATT |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_3111 |
SO3277 |
-100 |
6.3 |
ACTAGACTGCCTAGTCTATT |
|
Ssed_3111 |
SO3277 |
-72 |
7 |
ACTAGACTGTCCAGTCTAGT |
|
Ssed_3112 |
SO3278 |
-65 |
6.3 |
AATAGACTAGGCAGTCTAGT |
|
Ssed_3112 |
SO3278 |
-93 |
7 |
ACTAGACTGGACAGTCTAGT |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_1571 |
SO3277 |
-75 |
7 |
ACTAGACTGTCCAGTCTAGT |
|
Swoo_1571 |
SO3277 |
-103 |
6.7 |
ACTAGACTGTCTAGTCTATT |
|
Swoo_1570 |
SO3278 |
-64 |
6.7 |
AATAGACTAGACAGTCTAGT |
|
Swoo_1570 |
SO3278 |
-92 |
7 |
ACTAGACTGGACAGTCTAGT |
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