Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator SO3277 in Shewanellaceae

Properties
Regulator family: TetR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Regulog: SO3277 - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_3277 SO3277 -122 6.1 ACTGGACTGTCTAGTCCATT
SO_3277 SO3277 -150 6.5 ACTAGACTTGCTAGTCTAGT
SO_3278 SO3278 -60 6.5 ACTAGACTAGCAAGTCTAGT
SO_3278 SO3278 -88 6.1 AATGGACTAGACAGTCCAGT
Shewanella putrefaciens CN-32
Sputcn32_2634 SO3277 -98 5.6 ACTAGACTTGTTAGTCTAGA
Sputcn32_2634 SO3277 -70 6.7 ACTAGACTGTCTAGTCTATT
Sputcn32_2635 SO3278 -60 5.6 TCTAGACTAACAAGTCTAGT
Sputcn32_2635 SO3278 -88 6.7 AATAGACTAGACAGTCTAGT
Shewanella sp W3-18-1
Sputw3181_1373 SO3277 -98 5.6 ACTAGACTTGTTAGTCTAGA
Sputw3181_1373 SO3277 -70 6.7 ACTAGACTGTCTAGTCTATT
Sputw3181_1372 SO3278 -60 5.6 TCTAGACTAACAAGTCTAGT
Sputw3181_1372 SO3278 -88 6.7 AATAGACTAGACAGTCTAGT
Shewanella sp ANA-3
Shewana3_1297 SO3277 -97 6.5 ACTAGACTTGCTAGTCTAGT
Shewana3_1296 SO3278 -60 6.5 ACTAGACTAGCAAGTCTAGT
Shewana3_1296 SO3278 -88 6.7 AATAGACTAGACAGTCTAGT
Shewana3_1297 SO3277 -69 6.7 ACTAGACTGTCTAGTCTATT
Shewanella sp MR-4
Shewmr4_1247 SO3277 -97 6.5 ACTAGACTTGCTAGTCTAGT
Shewmr4_1247 SO3277 -69 6.7 ACTAGACTGTCTAGTCTATT
Shewmr4_1246 SO3278 -59 6.5 ACTAGACTAGCAAGTCTAGT
Shewmr4_1246 SO3278 -87 6.7 AATAGACTAGACAGTCTAGT
Shewanella sp MR-7
Shewmr7_1317 SO3277 -97 6.5 ACTAGACTTGCTAGTCTAGT
Shewmr7_1316 SO3278 -60 6.5 ACTAGACTAGCAAGTCTAGT
Shewmr7_1316 SO3278 -88 6.7 AATAGACTAGACAGTCTAGT
Shewmr7_1317 SO3277 -69 6.7 ACTAGACTGTCTAGTCTATT
Shewanella baltica OS155
Sbal_2972 SO3277 -74 6.5 ACTAGACTTGCTAGTCTAGT
Sbal_2972 SO3277 -46 6.7 ACTAGACTGTCTAGTCTATT
Sbal_2973 SO3278 -61 6.5 ACTAGACTAGCAAGTCTAGT
Sbal_2973 SO3278 -89 6.7 AATAGACTAGACAGTCTAGT
Shewanella denitrificans OS217
Sden_1279 SO3277 -95 6.8 ACTAGACTGTCCAGTCTATT
Sden_1279 SO3277 -123 6 ACTAGACTACCAAGTCTATT
Sden_1278 SO3278 -106 6 AATAGACTTGGTAGTCTAGT
Sden_1278 SO3278 -134 6.8 AATAGACTGGACAGTCTAGT
Shewanella frigidimarina NCIMB 400
Sfri_1149 SO3277 -97 5.5 ACTAGACTCAGTAGTCTAGT
Sfri_1149 SO3277 -69 6.8 ACTAGACTGTCCAGTCTATT
Sfri_1148 SO3278 -137 5.5 ACTAGACTACTGAGTCTAGT
Sfri_1148 SO3278 -165 6.8 AATAGACTGGACAGTCTAGT
Shewanella amazonensis SB2B
Sama_2342 SO3278 -101 6.4 AATAGACTAGACAGTCCAGT
Sama_2342 SO3278 -73 6.4 AATAGACTAGACAGTCCAGT
Sama_2341 SO3277 -100 6.4 ACTGGACTGTCTAGTCTATT
Sama_2341 SO3277 -72 6.4 ACTGGACTGTCTAGTCTATT
Shewanella loihica PV-4
Shew_1312 SO3278 -64 5.6 ATTAGACTAACAAGTCTAGT
Shew_1312 SO3278 -92 6.5 ACTAGACTAGACAGTCCAGT
Shew_1313 SO3277 -70 6.5 ACTGGACTGTCTAGTCTAGT
Shew_1313 SO3277 -98 5.6 ACTAGACTTGTTAGTCTAAT
Shewanella pealeana ATCC 700345
Spea_1325 SO3278 -76 6 ACTAGACTAGACAGTCCAGC
Spea_1325 SO3278 -104 7 ACTAGACTGGACAGTCTAGT
Spea_1326 SO3277 -102 7 ACTAGACTGTCCAGTCTAGT
Spea_1326 SO3277 -130 6 GCTGGACTGTCTAGTCTAGT
Shewanella halifaxensis HAW-EB4
Shal_1388 SO3278 -105 6.5 AATGGACTGGACAGTCTAGT
Shal_1389 SO3277 -109 6.5 ACTAGACTGTCCAGTCCATT
Shal_1389 SO3277 -137 6.4 ACTAGACTGCCTAGTCTAGT
Shal_1388 SO3278 -77 6.4 ACTAGACTAGGCAGTCTAGT
Shewanella piezotolerans WP3
swp_1475 SO3278 -77 6.7 AATAGACTAGACAGTCTAGT
swp_1475 SO3278 -105 6.5 AATGGACTGGACAGTCTAGT
swp_1476 SO3277 -100 6.7 ACTAGACTGTCTAGTCTATT
swp_1476 SO3277 -72 6.5 ACTAGACTGTCCAGTCCATT
Shewanella sediminis HAW-EB3
Ssed_3111 SO3277 -100 6.3 ACTAGACTGCCTAGTCTATT
Ssed_3111 SO3277 -72 7 ACTAGACTGTCCAGTCTAGT
Ssed_3112 SO3278 -65 6.3 AATAGACTAGGCAGTCTAGT
Ssed_3112 SO3278 -93 7 ACTAGACTGGACAGTCTAGT
Shewanella woodyi ATCC 51908
Swoo_1571 SO3277 -75 7 ACTAGACTGTCCAGTCTAGT
Swoo_1571 SO3277 -103 6.7 ACTAGACTGTCTAGTCTATT
Swoo_1570 SO3278 -64 6.7 AATAGACTAGACAGTCTAGT
Swoo_1570 SO3278 -92 7 ACTAGACTGGACAGTCTAGT
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