Profile of regulator SO1393 in Shewanellaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
|
| Effector: |
|
| Regulog: |
SO1393 - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_1392 |
SO1392 |
-203 |
6.6 |
AGTAGACAAATCAGTCTACT |
|
SO_1392 |
SO1392 |
-165 |
5.1 |
TACAGACAAATCTGTCTACT |
|
SO_1393 |
SO1393 |
-91 |
6.6 |
AGTAGACTGATTTGTCTACT |
|
SO_1393 |
SO1393 |
-129 |
5.1 |
AGTAGACAGATTTGTCTGTA |
|
Shewanella sp ANA-3
|
|
Shewana3_2981 |
SO1392 |
-208 |
6.5 |
GGTAGACAACTCAGTCTACC |
|
Shewana3_2981 |
SO1392 |
-173 |
5.9 |
AGCAGACAGATTGGTCTACC |
|
Shewana3_2980 |
SO1393 |
-98 |
5.9 |
GGTAGACCAATCTGTCTGCT |
|
Shewana3_2980 |
SO1393 |
-63 |
6.5 |
GGTAGACTGAGTTGTCTACC |
|
Shewanella sp MR-4
|
|
Shewmr4_2801 |
SO1393 |
-63 |
6.5 |
AGTAGACTGAGTTGTCTACC |
|
Shewmr4_2802 |
SO1392 |
-208 |
6.5 |
GGTAGACAACTCAGTCTACT |
|
Shewmr4_2802 |
SO1392 |
-173 |
6 |
GGTAGACAGACTGGTCTACC |
|
Shewmr4_2801 |
SO1393 |
-98 |
6 |
GGTAGACCAGTCTGTCTACC |
|
Shewanella sp MR-7
|
|
Shewmr7_2885 |
SO1392 |
-208 |
6.5 |
GGTAGACAACTCAGTCTACT |
|
Shewmr7_2885 |
SO1392 |
-173 |
5.6 |
AGTAGACAGACTGGTCTACA |
|
Shewmr7_2884 |
SO1393 |
-63 |
6.5 |
AGTAGACTGAGTTGTCTACC |
|
Shewmr7_2884 |
SO1393 |
-98 |
5.6 |
TGTAGACCAGTCTGTCTACT |
|
Shewanella loihica PV-4
|
|
Shew_1680 |
SO1392 |
-97 |
6.5 |
GGTAGACCAAGTTGTCTACT |
|
Shew_1680 |
SO1392 |
-71 |
5.7 |
GGTAGACAGACTTGTCTACA |
|
Shew_1679 |
SO1393 |
-51 |
6.5 |
AGTAGACAACTTGGTCTACC |
|
Shew_1679 |
SO1393 |
-77 |
5.7 |
TGTAGACAAGTCTGTCTACC |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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