Profile of regulator CalR in Shewanellaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Utilization of aromatic compounds |
| Effector: |
|
| Regulog: |
CalR - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_3683 |
calB |
-78 |
7.2 |
AACCGACTAATCAGTCGGTT |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_2982 |
calB |
-104 |
6.9 |
AACCGACTAATCAGTCGGTA |
|
Shewanella sp W3-18-1
|
|
Sputw3181_0965 |
calB |
-104 |
6.9 |
AACCGACTAATCAGTCGGTA |
|
Shewanella sp ANA-3
|
|
Shewana3_3251 |
calB |
-78 |
7.2 |
AACCGACTAATCAGTCGGTT |
|
Shewanella sp MR-4
|
|
Shewmr4_0872 |
calB |
-78 |
7.2 |
AACCGACTAATCAGTCGGTT |
|
Shewanella sp MR-7
|
|
Shewmr7_3150 |
calB |
-78 |
7.2 |
AACCGACTAATCAGTCGGTT |
|
Shewanella baltica OS155
|
|
Sbal_3332 |
calB |
-125 |
6.9 |
AACCGACTAATCAGTCGGTA |
|
Shewanella denitrificans OS217
|
|
Sden_0975 |
calB |
-45 |
6.8 |
ACCCGACTGATTAGTCGGTT |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_0937 |
calB |
-82 |
7.1 |
GACCGACTAATCAGTCGGTT |
|
Shewanella amazonensis SB2B
|
|
Sama_2855 |
calB |
-43 |
7.1 |
GACCGACTAATCAGTCGGTT |
|
Shewanella loihica PV-4
|
|
Shew_3103 |
calB |
-127 |
7.1 |
GACCGACTAATCAGTCGGTT |
|
Shewanella pealeana ATCC 700345
|
|
Spea_3357 |
calB |
-49 |
7.1 |
GACCGACTAATCAGTCGGTT |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_3429 |
calB |
-49 |
7 |
GACCGACTAATCAGTCGGTC |
|
Shewanella piezotolerans WP3
|
|
swp_1052 |
calB |
-50 |
7.1 |
GACCGACTAATCAGTCGGTT |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_3716 |
calB |
-203 |
7.1 |
GACCGACTAATCAGTCGGTT |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_4064 |
calB |
-77 |
6.6 |
GACCGACCAATCAGTCGGTT |
Export
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