Profile of regulator NikR in Shewanellaceae
Properties
| Regulator family: |
NikR |
| Regulation mode: |
repressor |
| Biological process: |
Nickel homeostasis |
| Effector: |
Nickel ion, (Ni2+) |
| Regulog: |
NikR - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella pealeana ATCC 700345
|
|
Spea_3644 |
nikA |
-49 |
7.1 |
GTGTGACGATTCTAAAAATAGTATTAC |
|
Spea_3645 |
nikR |
-164 |
7.1 |
GTAATACTATTTTTAGAATCGTCACAC |
|
Spea_1138 |
omp_Ni |
-96 |
7.1 |
GTAATACTTTTTTAAAATTCGTCATAC |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_3728 |
nikA |
-49 |
6.8 |
GTGTGACGATTCGAAAAATAGTATTAC |
|
Shal_3729 |
nikR |
-164 |
6.8 |
GTAATACTATTTTTCGAATCGTCACAC |
|
Shal_1183 |
omp_Ni |
-138 |
7.1 |
GTAATACTTTTTTAAAATTCGTCATAC |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_1674 |
nikR |
-167 |
7 |
GTAATACTACTTTTAGATTCGTAATAC |
|
Ssed_1675 |
nikA |
-56 |
7 |
GTATTACGAATCTAAAAGTAGTATTAC |
Export
|
Regulatory Sites
|
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|
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