Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NikR in Shewanellaceae

Properties
Regulator family: NikR
Regulation mode: repressor
Biological process: Nickel homeostasis
Effector: Nickel ion, (Ni2+)
Regulog: NikR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella pealeana ATCC 700345
Spea_3644 nikA -49 7.1 GTGTGACGATTCTAAAAATAGTATTAC
Spea_3645 nikR -164 7.1 GTAATACTATTTTTAGAATCGTCACAC
Spea_1138 omp_Ni -96 7.1 GTAATACTTTTTTAAAATTCGTCATAC
Shewanella halifaxensis HAW-EB4
Shal_3728 nikA -49 6.8 GTGTGACGATTCGAAAAATAGTATTAC
Shal_3729 nikR -164 6.8 GTAATACTATTTTTCGAATCGTCACAC
Shal_1183 omp_Ni -138 7.1 GTAATACTTTTTTAAAATTCGTCATAC
Shewanella sediminis HAW-EB3
Ssed_1674 nikR -167 7 GTAATACTACTTTTAGATTCGTAATAC
Ssed_1675 nikA -56 7 GTATTACGAATCTAAAAGTAGTATTAC
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Regulatory Sites [ FASTA format ] DOWNLOAD