Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator SAH_riboswitch in Various betaproteobacteria

Properties
Regulator family: RF01057
Regulation mode:
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Regulog: SAH_riboswitch - Various betaproteobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Azoarcus sp. EbN1
ebA3184 metH -169 48.1 TTGCTGAGGAGCGCTGCGACCCGCGACGGGCTGTGACTGCCGGGGCCAGGCTCAGCAACCGAACAACGGCGCTCGCAAACCAT
ebA1874 ahcY -139 48 CTGCCGAGGAGCGCTGCGAGACTTCCGTCCCAGGCTCGGCCCTTCAAAAACTGCGCTCACCTTAACC
Dechloromonas aromatica RCB
Daro_0046 metH -152 60.1 TTCTGCCGAGGAGCGCTGCGACCCTTTAATTCGGGGGCCAGGCTCGGCAATGATCAACGGCGCTCGCAAACC
Daro_0186 ahcY -144 45.7 ACCTACCGAGGGGCGCTGCAGGAGATTCCTCCCAGGCTCGGTTTAAAACGGCGCTCACTGATC
Thauera sp. MZ1T
Tmz1t_0606 metH -149 53.8 CTGCCGAGGAGCGCTGCGACCCCCTGATCGATCCGGGGCCAGGCTCGGCAACCGATCAACGGCGCTCACAAACCTT
Tmz1t_3842 ahcY -142 17.2 CGCCCTGCGGCGGGTATCAGTACAACGGCGCTCACCTGCGAA
Chromobacterium violaceum ATCC 12472
CV0965 ahcY -160 29.1 CCGAGGAGCGCTGCGAGGAGAACCCTTCCCCAGGCTCGGGCA
Laribacter hongkongensis HLHK9
LHK_00674 ahcY -134 54.2 GCCGAGGGGCGCTGCAAGGTGAAGGTCTACCCCAGGCTCGGCTTGAATTTGCAACGGCGCTCACCCACAAC
Methylobacillus flagellatus KT
Mfla_0193 ahcY -197 44.6 CTCTACCGAGGAACGTTGCAAGGATGTTCATCCCCAGGCTCGGTTGCCGCAGCGCAAGCTGTGTAAACGGCGTTCACCAGAT
Methylophilales bacterium HTCC2181
MB2181_00490 ahcY -138 30.7 TATTACCGAGGAACGCTGCAGGACTCCCCTAGGCTCGGCTAACTTTTTAAACCGCGTTCACTTAAC
Methylotenera mobilis JLW8
Mmol_2191 ahcY -169 39.8 TACTTCTGAGGGGCGTTGCGAGGCGTGTTAACCATACAGGCTCCCAGGCTCAGAACTTTGCAGTAAACGACGCTCACCAATA
Nitrosomonas europaea ATCC 19718
NE0660 ahcY -93 46.2 GGTACCGAGGAGCGCTGCAGCGGTCAATTCCGTGAGGCTCGTACCAATGGACAACCCAACAACGGCGCTCTTTCACTTT
Nitrosospira multiformis ATCC 25196
Nmul_A2540 ahcY -95 59.3 CCAGACCGAGGAGCGCTGCAACGGGCATTGTCCCGCGAGGCTCGGCAAGGAAGGATCGCTACAACGGCGCTCGTTCATT
Thiobacillus denitrificans
Tbd_2519 ahcY 9 58.5 CGGTTCCGAGGAGCGCTGCGACGGTTCACCCGCCAGGCTCGGGACGCTTCCTTTCAACGGCGCTCACGTTTT
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Regulatory Sites [ FASTA format ] DOWNLOAD
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