Profile of regulator GabR in Burkholderia
Properties
| Regulator family: |
GntR/MocR |
| Regulation mode: |
|
| Biological process: |
Gamma-aminobutyrate utilization |
| Effector: |
Gamma-aminobutyric acid |
| Regulog: |
GabR - Burkholderia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Burkholderia mallei ATCC 23344
|
|
BMAA1480 |
gabT |
-139 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
BMAA0431 |
gbtA |
-107 |
11.9 |
GTGGTTC-(16)-ATGGTTC-(9)-GAACCGT |
|
Burkholderia phymatum STM815
|
|
Bphy_4321 |
gbtA |
-161 |
11.9 |
GTGGTTC-(16)-ATGGTTC-(9)-GAACCGT |
|
Bphy_4618 |
gabT |
-114 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
Bphy_4851 |
gabT |
-143 |
10.8 |
ATGGCTC-(16)-GTGGCTC-(9)-GAGCCGT |
|
Burkholderia glumae BGR1
|
|
bglu_2g03380 |
gabT |
-127 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
Burkholderia cepacia AMMD
|
|
Bamb_4711 |
gabT |
-66 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
Bamb_3296 |
gbtA |
-107 |
11.1 |
GTGGTCC-(16)-ATGGTTC-(9)-GGACCGT |
|
Burkholderia pseudomallei K96243
|
|
BPSS1738 |
gbtA |
-107 |
11.9 |
GTGGTTC-(16)-ATGGTTC-(9)-GAACCGT |
|
BPSS0281 |
gabT |
-139 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
Burkholderia sp. 383
|
|
Bcep18194_B0280 |
gabT |
-118 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
Bcep18194_B2170 |
gbtA |
-107 |
11.7 |
GTGGTCC-(16)-ATGGTTC-(9)-GAACCGT |
|
Burkholderia vietnamiensis G4
|
|
Bcep1808_3589 |
gabT |
-124 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
|
Bcep1808_4395 |
gbtA |
-107 |
11.7 |
GTGGTCC-(16)-ATGGTTC-(9)-GAACCGT |
|
Burkholderia xenovorans LB400
|
|
Bxe_B2933 |
gbtA |
-129 |
11.9 |
GTGGTTC-(16)-ATGGTTC-(9)-GAACCGT |
|
Bxe_B0834 |
gabT |
-114 |
11.9 |
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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