Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Bifidobacteriaceae

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Bifidobacteriaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Bifidobacterium adolescentis ATCC 15703
BAD_1144 thiM -103 59.8 TAAACATGCGGGGGTGCTTGATGTCCAAGTCCATCAAGCTGAGATAGGCATGAACGCCTGACCCTTTGAACCTGTTGGTTAGGACCAACGTAGGGAGCAGATCATGAGCGATGAC
BAD_0950 ykoE -135 55.8 CAGGCGCAGACACGGGGGCCGAATGGCTGAGAGGAAGCAACCGCTTCAACCGTATGAACGTATACCGGGTAATGCCGGCGCACGGACGTCTCTCTATTTCCCGT
Bifidobacterium longum NCC2705
BL0804 tenA -157 33.3 AGGCGCATTGCAGGGGAACCCGTGAACCAAGCCGATACCAGCCGAGCCGGTACGGTGCCATTCGCGCCGAGACCGAATCAATCGCCGACATGCGGGTTGAGAAAGGCATAAGGCCTGACCCTTGGAGCCTGTTGGCCAACACCATCGGAAGGAGCAAATGATGACTTTTG
BL0115 thiM -100 59.2 CACTGTAATGCAGGGGAACTCGCATGTGGTTCGCGAGTTGAGAAAGGCCTGAGCCTGACCCTTAGAACCTGTTGGTTAAGACCATCGTAGGGAGCAGTAAATGAGCAATA
BL1071 ykoE -212 48 GGGAGTTGACACGGGAGCTGCCGTTGGGCGGCTGAGAGGAGACTCATAGTCTCGACCGATGGAACGTGACCGGATAATGCCGGCGCACGGAAATGTCGCTCTTACCTACC
BL1055a thiS -279 47.6 AACCGTAACGAACGGGAGCCGTGAGGCTGAGAGGAAGTCGCCAGACTTCGACCGGGGAACTTGACGCGGGTCATGCCGCCGTAAGGAATCGTTGTCGCAGATTTG
Bifidobacterium gallicum DSM 20093
BIFGAL_01225 thiP -235 43.4 AACGCGACACGGGGTGCCCGCACCGAACCCTTAATGTTGGCTGGAATGCTTGAGTATGCACGAAAGCCGGGCGACAGGGGCTGAGATTATACCCGCGAACCTGATGTAGTTAACCCTACCGGAGGAATTGTCCATGACCGGCTTCAT
BIFGAL_00330 thiM -117 48.3 GAATCAAGCAGGGGGGCCTGTGGAGTCAAGCATTGTGCTTGGTTCAGCAAGCTGAGATTGGCGTTACGCCTGACCCTTCGAACCTGTTGGTTAGAACCAGTGTAGGGAGCGTTCGCAATGAATATGC
BIFGAL_01797 ykoE -271 51.1 CGTCAACCGACACGGGGGCTGGCCCTGCGCCTGTTGCGTTATAGCGACTCATATGCTGCAGTACAGCGGTATATTCGACGACTTGCGTAACTGGCATGCGGAACGCCGGCTGAGAAGGGAATGGTTCCCTGACCGATTGAACGTGAATCCGGATAATGCCGGCGCACGGACGTCGTTATCGCCCGTGC
Bifidobacterium dentium Bd1
BDP_1341 tenA -107 62.7 CGGCGTAATGCAGGGGAACCCGTACAACCGGGTTGAGATAGGCGTAAGGCCTGACCCTTTGAACCTGATGGTTAATACCAGCGTAGGGAGGCATATCTTTGAGCGAT
BDP_2140 tenA2 -165 55.2 CGGGCACAGACACGGGGGCCGCAAGGCTGAGAGGAAGCATCCGCTTCGACCGTTTGAACGTATACCGGGTAATGCCGGCGCACGGACGTCTCTCTTGTTTCCCG
BDP_1597 thiM -103 57.4 TGTACATGCAGGGGAGCTTTTCGGCGGATGGTCGAAAGCTGAGAAAGGCGGCAAGCCTGACCCTTTGAACCTGTTGGTTAGGACCAACGTAGGGAGCAGCGTCATGAGTGACAA
BDP_1328 ykoE -134 55.9 CTGTCACAGACACGGGGGCCGTTAAGGCTGAGAGGAAGCGAACGCGCTTCGACCGTATGAACGTATACCGGGTAATGCCGGCGCACGGACGTCTCTCTTTTCCCGTG
BDP_0149 thiS -440 40 GCACAACCGAACGGGAGCCGAAAGGCTGAGAGGGAGTCGCAAGACTTCGACCGAGGACTTGATGCGGGTAATGCCGCCGTAAGGAGACGGGTTGTTCGCGCT
Bifidobacterium animalis subsp. lactis AD011
BLA_1213 tenA -89 55.7 CGAAGATGCGGGGGGACTCAGACGAGTTGAGAACGCGACAGCGTGACCCTTTGAACCTGTTGGCTAACACCTACGTAGGGAGACATCATATGGCGAAATCC
BLA_1029 thiP -126 50.7 GAACAGCGACACGGGGTGCCCGGGCCATGACCTTCAAACATGCTGGAAGCGACGCCAAAGCGGGTCGGCTGGGCTGAGATCACACTCGTTGAACCTGACATAGACAATGCTATCGAAGGGAATGTCATGACCCAGTCTG
BLA_0814 thiM -88 45.9 ACACATGTCAGGGGAGCTGATAGAGCTGAGAGTGGCTTCGCGCCTAACCCTTCGAACCTGTTGGCTAGCACCAGAGTAGGGAGTACAGATGACCACAGCGTC
BLA_1225 ykoE -134 57.8 TCGATGTAGACACGGGGGCTTGCTTGGCAGGCTGAGATGAAGCGAACGCTTCGACCGCATGAACGTGAACCGGATAATGCCGGCGCACGGACGTCGTATTTCCCGTGTC
BLA_1236 ykoE -146 52.8 GGCATCGACACGGGAGCTGGTGCAAAGCACCGGCTGAGAGAGGGTAACCTCGACCGATTGAACGTGAATCCGGGCAATGCCGGCGCACGGACGTCGCTCTACACCCGTGCC
Bifidobacterium angulatum DSM 20098
BIFANG_01057 tenA -118 56.2 GCAAATTGCAGGGGAACCCGCGCGTCGGCGCATATTGCAACGCGCACGCGGGTTGAGAAAGGCATACAGCCTGACCCTTAGAACCTGATGGTTAATACCAGCGTAGGGAGGCAACACCATGGCAAGCAT
BIFANG_01019 ykoE -125 46.3 GGCAATGACACGGGAGCCGTGAGGCTGAGAGGAAGCGAACGCTTCGACCGTATGAACGTTTACCGGGCAATTCCGGCGCACGGACGTCTCTCTTCCCGTGCCTT
BIFANG_01690 thiM -100 56.8 TGTACATGCAGGGGGGCTTCCCGCACGCGCGGGAGGCTGAGATAGGCGAACGCCTGACCCTTTGAACCTGTTGGTTAGGACCAACGTAGGGAGCAGCGCAATGAGTGACAG
BIFANG_00619 thiS -265 37.5 GCACAACCGAACGGGAGCCGAAAGGCTGAGAGGGAGCGACGAGCTTCGACCGAGGACTTGATGCGGGTAATGCCGCCGTAAGGAGACGGGTTGTTCGCGCC
Bifidobacterium bifidum NCIMB 41171
BbifN4_010100001942 thiM -102 47.9 GGGCACAATGCAGGGGAACCCGCAGCAGTACGCGAGTTGAGAAAGGCCACACGCCTGACCCTTTGAACCTGTTGGTCAAGACCATCGTAGGGAGCAATGATTATGAGCGA
BbifN4_010100006723 thiS -201 45.5 GGCGCAACCGAACGGGAGCCGCAAGGCTGAGAGGAAGCGACGCTTCGACCGTCAACTTGATGCGGGTAATGCCGCCGTAGGGACGAGTTGTCCAGTCGCA
Gardnerella vaginalis 409-05
HMPREF0424_1286 thiO -93 46.8 TACGAAACGCGGGAGCTTGTTCTATACAGGCTGAGAGGGCGAAAGCCGACCGTAAACCTGATGCGGGTAATGCCGCCGTAGGGAAGGAGTATTATGCGAAAT
HMPREF0424_0660 thiP -115 54 GACCTCAGACACGGGGTGCGCAACTACATCGTGCCAAACAACAATACATATAGTGTTGCGCTGAGAATACACTCGTTGAACCTGATATAGCTAAAACTATCGAAGGGATTGTCGCATGACTTACAG
HMPREF0424_1158 thiME -98 57 AGGATGGTTCGGAGTGCGCATTTGCCGCAAAATCGCGGGCGGCGCTGAGATTACATCCGTAAAACCTGATCTAGATAGTGCTAGCGAAGGGAAACATTATGACAACATGCA
HMPREF0424_0412 ykoE -288 50.1 TCAATCGACACGGGTGCTCTGTGTTATCTAGCTTATGCAAGCGTGAACATTCAGAGCTGAGAGAAAACCGCTTGAACGTGAATCCGGGTAATACCGGCGCACGGAGGTCTGTTTTTCCCGTGCCT
HMPREF0424_0892 thiEC -102 61.8 ACATTTTGCAGGGGTGCTTTCGAAAGAAGGCTGAGATGGTATTAGTTTGCCTAACCCTTCGAACCTGTTAGTTAATACAACGTAGGGAGCAACGATTTTAGTATGAC
Bifidobacterium breve DSM 20213
BIFBRE_01283 tenA -156 38 GCGCATTGCAGGGGAACCCGTGAACCAAGCCGATACCAGCCGAGCCGGTACGGTGCCATTCGCGCCGAGACCGAATCAATCGCCGACATGCGGGTTGAGAAAAGGCATAAGGCCTGACCCTTGGAGCCTGTTGGCCAACACCATCGGAGGGAGCAAATGATGACTTTTGAC
BIFBRE_00589 thiM -201 58.2 CAACGTAATGCAGGGGAACTCGCATGTGGTTCGCGAGTTGAGAAAGGCCTAAGCCTGACCCTTAGAACCTGTTGGTTAAGACCATCGTAGGGAGCAGTAATGAGCAGTAG
BIFBRE_00957 ykoE -170 46.3 GGAGTTGACACGGGAGCTGCCGACAGGCGGCTGAGAGGAGACGCATAGTCTCGACCGATGGAACGTGACCGGATAATGCTGGCGCACGGAATTGTCGCTCTTATTTACC
BIFBRE_00980 thiS -279 51.3 CGTAACGAACGGGAGCCGTAAGGCTGAGAGGAAGTTGCCAGACTTCGACCGGGGAACTTGACGCGGGTCATGCCGCCGTAAGGAATCGTTGTTCTTGATTTGT
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