Profile of regulator FMN in Bifidobacteriaceae

Properties
Regulator family:	RF00050
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Regulog:	FMN - Bifidobacteriaceae

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By RNA motif - FMN
By effector - Flavin mononucleotide
By pathway - Riboflavin biosynthesis

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Bifidobacterium angulatum DSM 20098
	BIFANG_00999	ribU	-177	83.4	CCGTAAGTTTCAGGGAAGGTGAAATTCCTTACTGGCGGTAAGTCGGCGCCCGGCATTCATAACGGAGCGCACGGCAAGCCCGCGACCCGCGCAAGCGGCCGATTCGGTGCGATTCCGAAGCCAACGGTACAGTCCGGATGGAAGAAACGAGGA
Bifidobacterium bifidum NCIMB 41171
	BbifN4_010100002939	ribU	-159	73.1	AAGCAAGTTTCAGGGAAGGTGCAATTCCTTACTGGCGGTGACCTGCGGAGCCGGGATTCATAACGGCGGCCGCGGCAGCCCGCGACCCGCGCAAGCGGCTGATCCGGTGGGAATCCGGAGCCAACGGTCAAAGTCCGGATGGAAGAAACGGAGC
Gardnerella vaginalis 409-05
	HMPREF0424_0823	ribU	-152	97.3	GTTAGTTTCAGGGAAGGTGAAAATCCTTACTGGCGGTAACAAAATACGTATTTCATGCGTTTTTGAAGCCCGCGAGCGGCTTACAAGCTGCTGATTCGGTTAAATTCCGAAGCCAACGGTTACAGTCCGGATGAAAGAAACGGAGACC
Bifidobacterium breve DSM 20213
	BIFBRE_00572	ribU	-138	88.2	CTGTCAGTTTCAGGGAAGGTGTAATTCCTTACTGGCGGTGATCTGCACTCCGGGTTTCATAACGGAGATGTCAGGAAGCCCGCGACCCGCGTAAGCGGCTGATCCGGTGAGATTCCGGAGCCAACGGTTATAGTCCGGATGGAAGAAACGAGGG
Bifidobacterium adolescentis ATCC 15703
	BAD_0962	ribU	-222	81	AAGCAAGTTTCAGGGAAGGTGAAAATCCTTACTGGCGGTAACGGCACGACCGGCATTCATAACGGCCCCATACCGAAGCCCGCGACCCGCGAAAGCGGCTGATCCGGTGAGAATCCGGGGCCAACGGTTACAGTCCGGATGGAAGAAACGGAGC
Bifidobacterium longum NCC2705
	BL0044	ribU	-159	88.7	CTGTCAGTTTCAGGGAAGGTGCAATTCCTTACTGGCGGTAACCTGCACCCCGGGTTTCATAACGGGGATGGCAGGAAGCCCGCGACCCGCGCAAGCGGCTGATCCGGTGAGATTCCGGAGCCAACGGTATAGTCCGGATGGAAGAAACGAGGG
Bifidobacterium gallicum DSM 20093
	BIFGAL_01827	ribU	-137	81.8	CATAGTTTCAGGGAAGGTGCAATTCCTTACTGGCGGTAACGCTAGGCCGGGTCCATAACCGGTATTCGACGCGAAGCCCGCAACCCGCATGACGCGGTTGATCCGGTGTGAATCCGGGGCCAACGGTTACAGTCCGGATGGAAGAAACGGAAGGT
Bifidobacterium dentium Bd1
	BDP_1337	ribU	-157	76.8	ACAAGTTTCAGGGAAGGTGAAAACCCTTACTGGCGGTAACGGTGAAACCGATGACCATAACGGCCCACCACCGAAGCCCGCGACCCGCGAATGCGGCTGATCCGGTGAGAATCCGGGGCCAACGGTCAAAGTCCGGATGGAAGAAACGGAGCTC
Bifidobacterium animalis subsp. lactis AD011
	BLA_1217	ribU	-148	75	AGTGCAATTTCAGGGAAGGTGAAACTCCTTACTGGCGGTAGCGCAACGGGCCCGTGCCCGCATGCGGAGCCCGCAACCCGCGCAAGCGGTGGATCTGGTGCGAGTCCAGGGCCAACGGTTATAGTCCGGATGAAAGAAATGAGCT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD