Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Oceanospirillales/Alteromonadales

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Oceanospirillales/Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Hahella chejuensis KCTC 2396
HCH_01612 thiB -191 62.8 GGCAGTCTCATCGGGGCGCCTGACTCCGCCGCGTTCATTCGATGCGCCATTGCGCTCGAACACACGCCTGTCAGGCTGAGAGTGTACCCGTAGAACCTGATCCAGTTAATGCTGGCGTAGGAAATGAGGCCGGCAAGTCC
HCH_00137 thiC -212 79.7 ACATCTTGTCGGGGTGCCTGGAGTAACAGGCTGAGACCACAACAGTGGGGCCCGTAGAACCTGATCTGGTTAGTACCAGCGTAGGAAACAAGTAGTTCATCAAACG
Marinobacter aqueolei
Maqu_1200 thiB -141 69.7 ACTCAACTCAACGGGGTGCCTGGAAGGGCTGAGACCATACCCGCGGAACCTGACCCGGTTAATACCGGCGTAGGGATTGAGTCACCACCTTTC
Maqu_0803 thiC -106 60.3 GCGTCTTGACGGGGTGCTGATTCGCCTGAACCAGGCGATCGGCTGAGATTGCAACGCAGAACCCGCGACCTGATCCGGATAATACCGGCGGAGGGATTAAGGCCAGATGAACCGC
Marinobacter sp. ELB17
MELB17_12481 thiP -371 61.1 GCCTTTCTCAACGGGGTGCCTCCAACAGGCTGAGACCATACCCGCGGAACCTGCCCCAGATAATGCTGGCGAAGGAATTGAGCTTTAATCAGCC
MELB17_01455 oarX -143 59.4 GGCTCGACACGGGGTGTCCTGCTTTGCAGGGCTGAGAGCACACCCGTTGAACCTGATCCAGTTCACACTGGCGAAGGGATGTCAGAAGGTGCGCCGGT
Oceanobacter sp. RED65
RED65_02148 thiC -304 64.8 ACATTAGCTCACGGGGTGCCCAATGTGCCATGCGCATAAGGCTGAGATTATGACCCGTAGAACCTGATCCGACTAGCATCGGCGTAGGAATGAGCTAAATGTAATAA
RED65_08869 omp_thi -185 72.8 AATTATCCAGGGGGAGGCCATTCTAAAGGCCTGAGATGACTGTTAATCAGCGAACCCCTAGAACCTGATCCGGTTAATGCCGGCGTAGGAATGGACAAAACCGCTTTATT
Oceanospirillum sp. MED92
MED92_00790 thiD -145 66.7 CATCTTGGTCGGGGTGCCTCGATTAGTGAGGCTGAGAGTATACCCGTTGAACCTGATCCGGTTTGTTCCGGCGTAGGAAATCGAGATCATCGAATGAC
Marinomonas sp. MWYL1
Mmwyl1_2392 thiC -287 79.8 GCCCTACTTGTCGGAGTGCCATTTGGCTGAGATCGCATAATTAAATGCGGGATCCGCAGAACCTGATCGGGCTAATACCCGCGTAGGAAACAAGAAAGTATCTATT
Mmwyl1_3472 thiB -200 72.8 TCATTATCTCATGGGGTGCTTTAGCATTTGGTAAATGTTAGAGCTGAGAAGCAGATTGTCTGCTAACCCACCGAACCTGATCCAGATCATGCTGGCGTAGGAATCGAGATAGCAAGTTGAA
Saccharophagus degradans 2-40
Sde_1456 thiO -92 62.6 GCTCACTTTGTCGGGGTGCCCCATACTTCTCTTGGGGCTGAGATTAAACCCGTACGACCTGATCAGGCTAGAACCTGCGTAGGCAACAGCATATGAATACCT
Sde_0368 thiD -207 64.2 CATTCTTGTCGGGGTGCTAGTTTTTGTGTGCTTTATTTGCGTGCAAAACAGGCTGAGAAAAACCCGTTGACCTGATCCGGCTAGTACCGGCGTAGGGAACGAGAAGAGTTTGGCGCT
Sde_3405 omp_thi -182 67.2 GCGCTCCTTAGGGGAGGCTGCGAAGCCTGAGACTAGTACTTATGTGCTTATACCCTTCGAACCTGATCCGGTTAGTACCGGCGTAGGAATAGGATAAAAACTATAGGC
Teredinibacter turnerae T7901
TERTU_3925 thiD -126 69.8 TTAACACTTGTCGGGGTGCCGTTTTACGGCTGAGAAATACCCGCTGACCTGATCTGGATAGTACCAGCGTAGGGAACAAGTTGCCCGCCTTG
TERTU_2621 thiO -88 52.5 AATGACTGTCGGGGTGCCAACATGACGTTGTCGGCTGAGAATATACCCGTACGACCTGATCAGGTTCGAACCTGCGTAGGCAACAATTATGACTGCTCCAA
TERTU_1246 omp_thi -176 72 GCTGTCCTTAGGGGTGATTGGCCGTCGCACGGTGCAATCTGAGACGGGATTACCCGAACCCTTTGAACCTGATCCGGCTAGTACCGGCGTAGGAATAGGATTTGCCTCTGTGTA
Cellvibrio japonicus Ueda107
CJA_2910 thiD -154 66.8 CACTTTCTTGTCGGGGTGCTCCGTATCTGTTTGCGGGGCTGAGAAATACCCGCCGACCTGATCCGGTTAGTACCGGCGTAGGGAACGAGAGCTCTTCACTT
CJA_2106 thiO -103 69.7 CCCTCTTGTCGGGGCGCCTTGGTAGCACAGCTATTGCGAAGGCTGAGATGGGTTCGGCCCAACCCGTAGAACCTGATCAGGTTGAGACCTGCGGAGGGAACAAGTGCTGCCCATCCGG
Chromohalobacter salexigens DSM 3043
Csal_0959 thiC -214 66.9 CGATAGCTTGACGGGGTGCCGGTGGAACCGGCTGAGATCGTCCTGCGCCGCGACTCATACGAAGCGCGGCGCCACGACGGATCCCGACGAACCTGATCCGGCTAGTACCGGCGTAGGGATCAAGCGGAGACCGCGG
Csal_1932 thiZ -137 50.2 TCTCTGGATAGGGGTGCCCGCCGACCGTGGCGGGCTGAGAGCGCCCGGCGCAACCCTGGAACCTGATCCGGTTAACACCGGCGGAGGAAACGCCAGAGCGTGCCGTCG
Reinekea sp. MED297
MED297_13137 thiB -128 66.3 CGTTCTTGCCGGGGTGCTGCCGTATTGCAGCTGAGAAAAACCCGTTGAACCTGAACCAGTTCGTACTGGCGTAGGGAGCAAAGCCCTCTTTGTGTT
MED297_07781 thiC -204 70.1 ATTCATCTTGTCGGAGTGCCAACGGTCATCGACCCACGGCTGAGATCGCAATTGCGAAATCCGCAGAACCTGATCCGGTTAATACTGGCGTAGGAATCAAGATTCTGCTCAGC
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