Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Psychromonadaceae/Aeromonadales

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Psychromonadaceae/Aeromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Psychromonas ingrahamii 37
Ping_0385 thiB -137 64.2 CTTTCTCAACGGGGTGCTGTTAAAAGGCTGAGATAACTAAACCCGTATACCTGAACCAGATAATGCTGGCGTAGGAATTGAGCTTATCAGTATTAT
Ping_2378 thiD -173 88.8 GCAAATATAGTCGGGGGGCCTGAAGGCTGAGATCGCATAGTGCGAAACCCGTTGAACCTGATTCAGTTAATACTGGCGTAGGGAACTATAAGTCTTGTTTT
Ping_0360 thiC -221 60 GGCTCTTGTCGGAGCGCCTTCGGGCTGAGACTACTGAGTTTGCAATATGATCACCCAATAACAGGTGTTTTTTGTACAGCAAAGTGGAATCCGTGGAACCTGATTGGGTTAATACCTGCGTAGGAAACAAGCATAAAGAAAATGA
Psychromonas sp. CNPT3
PCNPT3_06913 thiD -169 73.6 TTCGATAGTCGGGGGGCCCAAAAGGCTGAGATCGTAGAAACGAGACCCGTTGAACCTGATCCAATTAATATTGGCGGAGGGAACTATGCATCTTGTTAGAT
PCNPT3_13027 thiC -181 71.3 GCACTTCTTGTCGGAGTGCCTTAGGGCTGAGATCACAGATTATATGTGGGATCCGTGGAACCTGATTGGGTTAATACCTGCGAAGGGAACAGGTCAAAGTTGCAC
Moritella sp. PE36
PE36_22360 thiB -151 46.7 CTCACTCATCGGGGTGCTGCTCGACTTTTTGTTAAAGAGTCACAGTGGCTGAGATAACACCCGTAATAACTTGAACCAGATAATGCTGGCATAGGAATGAGATTCGACTAACTGA
PE36_01105 thiD -177 83.8 TTATATAGTCGGGGGGCCTAATAGGCTGAGATCGCACATTAATTGCGAGACCCGTTGAACCTGATTCAGTTAACACTGACGTAGGGAACTATCAGTCTTGCTTCTC
PE36_24113 thiC -234 71.6 TTGAATCTTGTCGGAGTGCTTTAGGGCTGAGACCATTTAAATATGGGATCCGTGGAACCTGATCAGGCTAATACCTGCGTAAGGAAACAAGAGTGATTAATAC
Aeromonas hydrophila subsp. hydrophila ATCC 7966
AHA_0876 thiB -143 64.1 CGTTTCTCAAACGGGGTGCGGTTTACCGCTGAGATTATACCCGTGAACCTGATCCAGATAATGCTGGCGGAGGAATTTGAGGCATGGCGCTC
AHA_0439 thiC -396 65.1 CCATCTTGTCGGAGTGCTGACCGTCGAACGACGCTAAGCTGAGACCGTTAATTCGGGATCCGTGGAACCTGATCAGGTTAAGACCTGCGAAGGGAAACAAGGGTAACTTGCGGGT
Aeromonas salmonicida subsp. salmonicida A449
ASA_3415 thiB -195 64.1 TTTCTCAAACGGGGTGCGGTTTACCGCTGAGATTATACCCGTGAACCTGATCCAGATAATGCTGGCGGAGGAATTTGAGGCATGGCGCTCAT
ASA_3905 thiC -377 61 CGCCATCTTGTCGGAGTGCCAACCGTCGAACGACGCAAGGCTGAGACCGTTAATTCGGGATCCGTGGAACCTGATCAGGCTAGCACCTGCGAAGGGAAACAAGGGTAACCAGTGG
Tolumonas auensis DSM 9187
Tola_0219 thiM -142 64.1 TTAACCGTGACCGGGGTGCTGCCTGGCAGCTGAGAAATACCCGTTGCACCTGATCTGGATCATGCCAGCGTAGGGAGTTCACGACGGGTATCTC
Tola_1074 thiC -202 72.9 TTCACTTGTCGGAGTGCCCTAAGGGCTGAGACCGTTTATTCGGGATCCGTTGAACCTGATCAGGCTAGAACCTGCGAAGGGAAACAAGAGTTGCGCTCAGGA
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