Profile of regulator NiaR in Clostridia-3

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Bacteroides pectinophilus ATCC 43243
	BACPEC_00421	niaY	-45	5.4	ATCATCTGACAAGACAGTTGAC
	BACPEC_00421	niaY	-33	5.3	GACAGTTGACATTACAGCTGTA
Blautia hansenii DSM 20583
	BLAHAN_02639	nadA	-256	6.2	AACAACTGTCTTGTCACTTGTA
Bryantella formatexigens DSM 14469
	BRYFOR_01996	niaY	-42	5.6	TGCAGGTGACAAGACACTTGAC
Clostridium bolteae ATCC BAA-613
	CLOBOL_03914	nadA	-108	5.1	CCTATATGTCTTGTCACATGTA
Clostridium nexile DSM 1787
	CLONEX_03264	nadA	-3	6	AGCATGTGTCTTGTCACCTGTA
	CLONEX_03876	niaY	-47	5.8	TGCTAGTGACAAGACACATGTA
Clostridium scindens ATCC 35704
	CLOSCI_01553	nadA	-10	5.3	CTTATCTGTCTTGTCATATGTA
	CLOSCI_02252	niaY	-53	5.9	TTCAAATGACAAGACAGTTGTA
Dorea formicigenerans ATCC 27755
	DORFOR_01504	nadA	-47	4.9	ACTTACTGTCTTGTCACATGTA
Dorea longicatena DSM 13814
	DORLON_01089	nadB	-123	6.1	AACAATTGTCTTGTCACATGTA
	DORLON_02159	niaY	-98	6.4	GACATGTGACAAGACACATGTA
Eubacterium eligens ATCC 27750
	EUBELI_01431	nadA	-102	6.5	TACAACTGTCTTGTCACATGTA
Eubacterium rectale ATCC 33656
	EUBREC_1033	nadA	-173	6.3	TACAACTGACAAGACACCTGTA
	EUBREC_1034	nadB	-129	6.3	TACAGGTGTCTTGTCAGTTGTA
Roseburia intestinalis L1-82
	ROSINTL182_03917	nadA	-69	6.2	AACATGTGTCTTGTCATATGTA
Ruminococcus gnavus ATCC 29149
	RUMGNA_03804	nadA	-94	6.2	CACAACTGTCTTGTCACATGTA
Ruminococcus lactaris ATCC 29176
	RUMLAC_00642	nadA	-57	6.2	AACATCTGTCTTGTCACCTGTA

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --