Profile of regulator SAH_riboswitch in Burkholderia
Properties
| Regulator family: |
RF01057 |
| Regulation mode: |
|
| Biological process: |
Methionine metabolism |
| Effector: |
S-adenosylhomocysteine |
| Regulog: |
SAH_riboswitch - Burkholderia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Burkholderia pseudomallei K96243
|
|
BPSL3290 |
ahcY |
-175 |
46.5 |
CGTTTCCGAGGAGCGTTGCGACGGGCCCCGCCCGCCAGGCTCGGAAATGGTCAACCGAGCGGTGTGTCG |
|
Burkholderia mallei ATCC 23344
|
|
BMA2842 |
ahcY |
-175 |
46.5 |
CGTTTCCGAGGAGCGTTGCGACGGGCCCCGCCCGCCAGGCTCGGAAATGGTCAACCGAGCGGTGTGTCG |
|
Burkholderia sp. 383
|
|
Bcep18194_A3375 |
ahcY |
-148 |
43.8 |
TTTCCGAGGAGCGTTGCGACGGACCACTCTGCGTCCGCCAGGCTCGGAAGGCTTCACCAAGCAGCTTGTGCGGCAC |
|
Burkholderia cepacia AMMD
|
|
Bamb_0186 |
ahcY |
-149 |
47 |
TTTCCGAGGAGCGTTGCGACGGACCTTCTGCGTCCGCCAGGCTCGGAAAGCTTCACCAAGCAGCCGTGCGGCGAGATTCG |
|
Burkholderia vietnamiensis G4
|
|
Bcep1808_0232 |
ahcY |
-149 |
46.7 |
TTTCCGAGGAGCGTTGCGACGGACCGCCTGTGTCCGCCAGGCTCGGAAAGCTTCACCAAGCAGCCGTGCGGCGAAATTCG |
|
Burkholderia glumae BGR1
|
|
bglu_1g01990 |
ahcY |
-169 |
45.7 |
TTTCCGAGGAGCGTTGCGACGGGCACCGGCCCGCCAGGCTCGGAAATCTTCACCAGGCGGTGGCCCGCCCG |
|
Burkholderia xenovorans LB400
|
|
Bxe_A0178 |
ahcY |
-171 |
36.6 |
CGTCTTCGAGGAGCGTTGCGACGGGTACCGCGAATCAGCATATTCGCCGGCTGCCCGCCAGGCTCGAAGGCTTCAATCGGAGGGCCCGGATG |
|
Burkholderia phymatum STM815
|
|
Bphy_2918 |
ahcY |
-146 |
41.6 |
GTCTTCGAGGAGCGTTGCGACGGGTTCGGCCCGCCAGGCTCGAAGGCTTTCAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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