Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Burkholderia

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Burkholderia
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Burkholderia pseudomallei K96243
BPSL3154 thiO -364 50.2 GCCGACGAAACAGGGGTGCTTCGCGCGTCCCCGGCCTGCCGAGTCGGCACGGCCGGATGCGCGACGAGGCTGAGAGAGACCCTTCGCACCCGATCCGGGTAATACCGGCGCGGGAAGTTTCCGATCCCGCCGG
BPSL1290 thiC -241 59 CTTGCTAACGCGGGGGTCCTGCAATGCGCTCGGTCAAACGATCGTGCGCAGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTCAGGGTTTCGCCG
BPSS1111 emrE -175 61 CCCGGCCATCAGGGGGAGCCGACGATCGGCTGAGAGGTTCCGCGCGCGGAACGACCCCTAAACCTGATCCGGGTAATGCCGGCGTAGGAATGAGGTCCGCGATGAGT
Burkholderia mallei ATCC 23344
BMA2730 thiO -358 50.2 GCCGACGAAACAGGGGTGCTTCGCGCGTCCCCGGCCTGCCGAGTCGGCACGGCCGGATGCGCGACGAGGCTGAGAGAGACCCTTCGCACCCGATCCGGGTAATACCGGCGCGGGAAGTTTCCGATCCCGCCGG
BMA3090 thiC -239 59 TGCTAACGCGGGGGTCCTGCAATGCGCTCGGTCAAACGATCGTGCGCAGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTCAGGGTTTCGCCGTT
Burkholderia sp. 383
Bcep18194_A3508 thiO -348 62.1 CGACGAAACAGGGGTGCTTCGTGGCGCGGCCGGCGGATGTTCCGGGCAGCGCGATGAGGCTGAGAAAAACCCTTTGCACCCGATCCGGGTAATACCGGCGAGGGAAGTTTCTGAACCCGCCGGGC
Bcep18194_A4331 thiC -242 59.1 CCTGCTAACGCGGGGGTCCTGCAATGCGTTCGGTCAAACAACCGGCATTGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTACGGATTTCGCCG
Burkholderia cepacia AMMD
Bamb_0328 thiO -357 59.1 CGACGAAACAGGGGTGCTTCGAGCGCGGCCGACGGTTCATTCCGGGCGACGCGGCGAGGCTGAGAAAGACCCTTCGCACCCGATCCGGGTAATACCGGCGAGGGAAGTTTCTGATCCCGCCGGGC
Bamb_1105 thiC -242 59.4 CTTGCTAACGCGGGGGTCCTGCAATGCGTTCGGTCAAACAAACCGGCATTGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTACGATTTCGCCGC
Burkholderia vietnamiensis G4
Bcep1808_0389 thiO -356 61.8 CGACGAAACAGGGGTGCTTCGAGTGCGGCCATGGGTAGTTCCGGGCAACGCTGCGAGGCTGAGAAAGACCCTTCGCACCCGATCCGGGTAATACCGGCGAGGGAAGTTTCTGATCCCGCCGGGC
Bcep1808_1132 thiC -242 59 GCTGCTAACGCGGGGGTCCTGCAATGCGCCCGGTCAAACAACCGGCATTGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTACGGATTTCGCCG
Burkholderia glumae BGR1
bglu_1g03160 thiO -361 59.5 AGACGAAACAGGGGTGCTTTGCTGCCTGTCGGCGTCCGGTGAACGATGCATCGGGATGCGCGGCGGCAAGGCTGAGAGAAGACCCTTCGCACCCGATCCGGATAATACCGGCGCGGGAAGTTTTCGATTCCACCGGGT
bglu_1g10430 thiC -192 56.7 CTAGCTAACGCGGGGGTCCTGCGCGGCGCCATTCGAAACAGGGCGCTTCGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTACAGGCCTCGACC
bglu_2g17570 emrE -187 58 AGCGGCCATCAGGGGGAGCCGGCGTGCCGGCTGAGAGGTTCCGCTCACGGAACGACCCCGGAACCTGATCCGGATCATGCCGGCGTAGGAATGAGGTCATCCACGTGT
Burkholderia xenovorans LB400
Bxe_A0383 thiO -342 61 TTCGACGAAACAGGGGTGCTTCGCGCACGGGCGGCATGGTTTTCATGCCGCGGCGGCGAGGCTGAGAGAGACCCTTTGCACCCGATCCGGGTAATACCGGCGCGGGAAGTTTCCGGAAGCAGCCA
Bxe_A1449 thiC -211 56 TGCTAACGCGGGGGTCCTGCGTCGCACGGAGGTTGGAGGTCCGTGTTGCGTGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTACGGATTTCGCACTC
Burkholderia phymatum STM815
Bphy_2774 thiO -343 63.5 CCAGACGAAACAGGGGTGCTTCGTGCGCGGGCAGTCGTCGCGGCGAGGCTGAGAGAGACCCTTCGCACCCGATCCGGGTAATACCGGCGCGGGAAGTTTTCGGGAAGTTTTT
Bphy_1518 thiC -231 51.3 TGCTAACGCGGGGGTCCTGCGTTGTGCGTCGCCGGGAAGCGAGACGGCACTGCACGGCGTGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTTCGGGCTCGCCGCTT
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