Profile of regulator SAM_alpha in Rhodobacterales
Properties
| Regulator family: |
RF00521 |
| Regulation mode: |
|
| Biological process: |
Methionine biosynthesis |
| Effector: |
S-adenosylmethionine |
| Regulog: |
SAM_alpha - Rhodobacterales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Rhodobacter sphaeroides 2.4.1
|
|
RSP_1851 |
metY |
-91 |
59 |
GCAAAAGCCGTGGTGCTTTGTGCCGGATTGCGGGCCACGTTAAAGAAACCGCTAAAGAGGCGAGGGCCCGCCGCCCCC |
|
Jannaschia sp. CCS1
|
|
Jann_1854 |
metY |
-148 |
62.2 |
CCAAGGGCCGTGGCGATTTGTGAACCGGATTGCGGGCCACGTTAAACATACCGCTAAAGAGGTCGAGGCCGCTGAAAGAC |
|
Rhodobacterales bacterium HTCC2654
|
|
RB2654_19698 |
metY |
-120 |
59.5 |
GCGATTGCCGTGGCGATTTGTCTTCCGGATTGCGGGCCACGTTAATCACTCCGCTAAAGAGGTCTGGGACGATGAACGCC |
|
Oceanicola granulosus HTCC2516
|
|
OG2516_07445 |
metY |
-127 |
61.4 |
CAGCGCGCATCGTGGCGATTTGTTACCGGATTGCGGGCCACGTTAAACATGCCGCTAAAGAGGTCTCGGGCGCAGACCC |
|
Loktanella vestfoldensis SKA53
|
|
SKA53_02111 |
metY |
-132 |
57.7 |
CCAGACGCCGTGGTGATTTGTTTCCGGATTGCAGGCCACGTAAAACATTCTGCTAAAAAGGTGGCGGGTTTCATAGCCC |
|
Oceanicola batsensis HTCC2597
|
|
OB2597_07085 |
metY |
-150 |
42 |
AGACAGCGCGCGTGGCGATTTGTTGCCGGATTGCGGGCCACACGAAACATTCCGCTAAAAGGCCAGTCGTCGGGGACC |
|
Roseovarius nubinhibens ISM
|
|
ISM_06080 |
metY |
-133 |
51.4 |
ATCCACATCGTGGCGATTTGTTACCGGATTGCGGGCCACGTTAATCCCTCCGCTAAAAGGTCAGGACCAAGGCCCCCT |
|
Roseovarius sp. 217
|
|
ROS217_17025 |
metY |
-134 |
58.7 |
AATGCGCGACTGTGGCGATTTGTTACCGGATTGCGGGCCACGTTAAACAAACCGCTAAAAGGTCAGGATGAAAGGCCC |
|
Sulfitobacter sp. EE-36
|
|
EE36_17182 |
metY |
-147 |
24.6 |
ACGTGGCGATTTGATACCGGATTGCGGGCCACG |
|
Silicibacter TM1040
|
|
TM1040_1938 |
metY |
-157 |
61.6 |
ATCAAGACCCCGTGGCGATTTGTTTACCGGATTGCGGGCCACGTAAAACAAGCCGCTAAAGAGGTCAGGACGACGGGACT |
|
Silicibacter pomeroyi DSS-3
|
|
SPO1351 |
metY |
-144 |
52.1 |
AGGAACCACGTGGCGATTTGTTACCGGATTGCGGGCCACGCTAAACATCACCGCTAAAAGGTCAGGATGAAAGACCCCC |
|
Roseobacter sp. MED193
|
|
MED193_20939 |
metY |
-135 |
58.9 |
ATCAACACCGTGGCGATTTGTAACCGGATTGCGGGCCACGTTAAATATCCGCTAAAGAGGTCAGGATGTGAAGGACCC |
|
Hyphomonas neptunium ATCC 15444
|
|
HNE_3283 |
metA |
-162 |
82.3 |
AATCCTCGTCCGTGGTGATTTGGCCGGCCGGCTTGCAGCCACGTTAAACAAGTCGCTAAAGGGCCGAGATGCAGGAAAC |
|
Oceanicaulis alexandrii HTCC2633
|
|
OA2633_08279 |
hom |
-185 |
21.7 |
TATCCAGATTTGCGCCGATTTGAGCTTCAGCTTGCGGGCGCGGAACAAGTGCGGCTAAAGCGAAGCGTCGAGATTGTT |
Export
|
Regulatory Sites
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[ FASTA format ]
|
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