Profile of regulator mini-ykkC in Rhodobacterales
Properties
| Regulator family: |
RF01068 |
| Regulation mode: |
|
| Biological process: |
Multidrug resistance |
| Effector: |
|
| Regulog: |
mini-ykkC - Rhodobacterales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Jannaschia sp. CCS1
|
|
Jann_1290 |
ykkC |
-66 |
41.2 |
CCCGCCGGGACGACCCGGCCATGTACGGGTAGTTGTCAGGACGACCTGC |
|
Rhodobacterales bacterium HTCC2654
|
|
RB2654_05847 |
COG4125 |
-69 |
27.4 |
CGGTCATCAGGACGACCTTCCCATCATGGATCAACACCGGGACGACCCGG |
|
Oceanicola batsensis HTCC2597
|
|
OB2597_05315 |
COG4125 |
-70 |
25.6 |
AGCGAGGACGACCTCGCCCGGCCAGACGGTCAGCACGCGGGACGGCCCGACC |
|
OB2597_08269 |
COG4125 |
-70 |
27.7 |
AGCGAGGACGACCTCGCCCGGCCAGACGGTCAGCTCGCGGGACGGCCCGAGC |
|
Roseovarius nubinhibens ISM
|
|
ISM_07275 |
COG4125 |
-76 |
26 |
CATGCGAGGACGACCTCCGCCCCATGCAACCCGGGGTTTTTAGATTCGGGACGGCCCGA |
|
Roseovarius sp. 217
|
|
ROS217_23162 |
COG4125 |
-65 |
31.1 |
AGCGAGGACGACCTCCACATCTGGACAACAGCCCGGGACGACCCGGCA |
|
Sulfitobacter sp. EE-36
|
|
EE36_10819 |
COG4125 |
-67 |
33.7 |
AGTGTGAGGACGACCTCCCCTGAATGGAAAACTGTCGGGACGACCCGG |
|
Silicibacter TM1040
|
|
TM1040_1959 |
COG4125 |
-64 |
15 |
CGCCGTGCAGGCGTGACCGTTGCCTCGTTATCGGGACGACCCGACC |
|
Hyphomonas neptunium ATCC 15444
|
|
HNE_2609 |
ykkC |
-62 |
32.7 |
CAGGAGGACGGCCTCCCCCATATCGGGAACGCTTCGGGACGGCCCGTTT |
|
Oceanicaulis alexandrii HTCC2633
|
|
OA2633_14446 |
ykkC |
-70 |
41.2 |
CCTGAGAGGACGACCTCCCCGCACTCGGGATCAGCATTCGGGACGGCCCGA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
