Profile of regulator mini-ykkC in Rhodobacterales

Properties
Regulator family:	RF01068
Regulation mode:
Biological process:	Multidrug resistance
Effector:
Regulog:	mini-ykkC - Rhodobacterales

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - mini-ykkC
By pathway - Multidrug resistance

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Jannaschia sp. CCS1
	Jann_1290	ykkC	-66	41.2	CCCGCCGGGACGACCCGGCCATGTACGGGTAGTTGTCAGGACGACCTGC
Rhodobacterales bacterium HTCC2654
	RB2654_05847	COG4125	-69	27.4	CGGTCATCAGGACGACCTTCCCATCATGGATCAACACCGGGACGACCCGG
Oceanicola batsensis HTCC2597
	OB2597_05315	COG4125	-70	25.6	AGCGAGGACGACCTCGCCCGGCCAGACGGTCAGCACGCGGGACGGCCCGACC
	OB2597_08269	COG4125	-70	27.7	AGCGAGGACGACCTCGCCCGGCCAGACGGTCAGCTCGCGGGACGGCCCGAGC
Roseovarius nubinhibens ISM
	ISM_07275	COG4125	-76	26	CATGCGAGGACGACCTCCGCCCCATGCAACCCGGGGTTTTTAGATTCGGGACGGCCCGA
Roseovarius sp. 217
	ROS217_23162	COG4125	-65	31.1	AGCGAGGACGACCTCCACATCTGGACAACAGCCCGGGACGACCCGGCA
Sulfitobacter sp. EE-36
	EE36_10819	COG4125	-67	33.7	AGTGTGAGGACGACCTCCCCTGAATGGAAAACTGTCGGGACGACCCGG
Silicibacter TM1040
	TM1040_1959	COG4125	-64	15	CGCCGTGCAGGCGTGACCGTTGCCTCGTTATCGGGACGACCCGACC
Hyphomonas neptunium ATCC 15444
	HNE_2609	ykkC	-62	32.7	CAGGAGGACGGCCTCCCCCATATCGGGAACGCTTCGGGACGGCCCGTTT
Oceanicaulis alexandrii HTCC2633
	OA2633_14446	ykkC	-70	41.2	CCTGAGAGGACGACCTCCCCGCACTCGGGATCAGCATTCGGGACGGCCCGA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD