Statistics of regulated genes

Genome	Genes	Operons
Rhodobacter sphaeroides 2.4.1
Paracoccus denitrificans PD1222
Jannaschia sp. CCS1	1	1
Rhodobacterales bacterium HTCC2654	1	1
Oceanicola granulosus HTCC2516
Loktanella vestfoldensis SKA53
Oceanicola batsensis HTCC2597	2	2
Roseovarius nubinhibens ISM	1	1
Roseovarius sp. 217	1	1
Sulfitobacter sp. EE-36	1	1
Silicibacter TM1040	1	1
Silicibacter pomeroyi DSS-3
Roseobacter sp. MED193
Hyphomonas neptunium ATCC 15444	1	1
Oceanicaulis alexandrii HTCC2633	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
COG4125	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222 Gene: Pden_0303: Predicted membrane protein	Jannaschia sp. CCS1	* Rhodobacterales bacterium HTCC2654 Site: position = -69 score = 27.43 sequence = CGGTCATCAGGACGA... Gene: RB2654_05847: Predicted membrane protein	Oceanicola granulosus HTCC2516 Gene: OG2516_17815: Predicted membrane protein	Loktanella vestfoldensis SKA53	*2 Oceanicola batsensis HTCC2597 Site: position = -70 score = 25.6 sequence = AGCGAGGACGACCTC... Gene: OB2597_05315: Predicted membrane protein Site: position = -70 score = 27.68 sequence = AGCGAGGACGACCTC... Gene: OB2597_08269: Predicted membrane protein	* Roseovarius nubinhibens ISM Site: position = -76 score = 26.05 sequence = CATGCGAGGACGACC... Gene: ISM_07275: Predicted membrane protein	* Roseovarius sp. 217 Site: position = -65 score = 31.07 sequence = AGCGAGGACGACCTC... Gene: ROS217_23162: Predicted membrane protein	* Sulfitobacter sp. EE-36 Site: position = -67 score = 33.73 sequence = AGTGTGAGGACGACC... Gene: EE36_10819: Predicted membrane protein	* Silicibacter TM1040 Site: position = -64 score = 15.0 sequence = CGCCGTGCAGGCGTG... Gene: TM1040_1959: Predicted membrane protein	Silicibacter pomeroyi DSS-3	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Predicted membrane protein
CRON 2.
ykkC	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222 Gene: Pden_3948: Quaternary ammonium compound-resistance protein sugE	* Jannaschia sp. CCS1 Site: position = -66 score = 41.18 sequence = CCCGCCGGGACGACC... Gene: Jann_1290: Quaternary ammonium compound-resistance protein sugE	Rhodobacterales bacterium HTCC2654	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Sulfitobacter sp. EE-36	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Roseobacter sp. MED193	* Hyphomonas neptunium ATCC 15444 Site: position = -62 score = 32.68 sequence = CAGGAGGACGGCCTC... Gene: HNE_2609: Quaternary ammonium compound-resistance protein sugE	* Oceanicaulis alexandrii HTCC2633 Site: position = -70 score = 41.21 sequence = CCTGAGAGGACGACC... Gene: OA2633_14446: Quaternary ammonium compound-resistance protein sugE	Quaternary ammonium compound-resistance protein sugE

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