Profile of regulator mini-ykkC in Pseudomonadaceae

Properties
Regulator family:	RF01068
Regulation mode:
Biological process:	Multidrug resistance
Effector:
Regulog:	mini-ykkC - Pseudomonadaceae

Member of regulog collections

By taxonomy - Pseudomonadaceae
By RNA motif - mini-ykkC
By pathway - Multidrug resistance

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Pseudomonas aeruginosa PAO1
	PA3265	ykkC1	-80	31.3	AGTGAGGACGACCTCACCACCCGCCTCCGGCCGGTGATCGAATGGGGACGGCCCCGCC
	PA1882	ykkC2	-62	42.5	AAGCGGGACGACCCGTTTTCCCTCTTTCATTGCGCGGGGACGACCCTGCA
Pseudomonas entomophila L48
	PSEEN1409	ykkC1	-77	41.2	ACTGTGAGGACGACCTCACGACGCAGTGCGTGATCGCTACGGGGACGGCCCCA
Pseudomonas putida KT2440
	PP1701	ykkC1	-78	38.4	ACGGTGAGGACGACCTCACGACGCACCGCGTGACCACTCCGGGGACGGCCCCA
Pseudomonas syringae pv. tomato str. DC3000
	PSPTO4243	ucaA	-92	41	GCAACGGACGACCGTTGCGTAGATAGATCAATAGCGGGACGGCCCGCTT
Pseudomonas fluorescens Pf-5
	PFL_4408	ykkC1	-71	42.9	CGCGAGGACGACCTCGCGACTCATTCGAGCGATCAATTCCGGGGACGACCCCATC
Pseudomonas mendocina ymp
	Pmen_1358	ucaA	-73	40.2	TCACCACGGACGACCGTGGCACATGACGAATGACGGCGGGACGGCCCGC
Pseudomonas stutzeri A1501
	PST_3492	ykkC3	16	31.9	CGCCGCGGGACGACCCGGGGCGTGTCGAATCATGCGGGGACGGCCCTG

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD