Profile of regulator SAH_riboswitch in Pseudomonadaceae

Properties
Regulator family:	RF01057
Regulation mode:
Biological process:	Methionine metabolism
Effector:	S-adenosylhomocysteine
Regulog:	SAH_riboswitch - Pseudomonadaceae

Member of regulog collections

By taxonomy - Pseudomonadaceae
By RNA motif - SAH_riboswitch
By effector - S-adenosylhomocysteine
By pathway - Methionine metabolism

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Pseudomonas aeruginosa PAO1
	PA0432	ahcY	-128	38	CCGTTCGAGGGGCGCTGCAGCAGGCCTAGGCCTGTCAGGCTCGAACGGA
Pseudomonas entomophila L48
	PSEEN5037	ahcY	-112	32.6	CGAGGGGCGCTGCAGCAGGTTCGTCCTGTCAGGCTCGGTC
Pseudomonas syringae pv. tomato str. DC3000
	PSPTO5068	ahcY	-132	60.7	TGTCCGAGGGGCGCTGCAGCAGGTTTACCCTGTCAGGCTCGGATGGGGCGTTGTTTGTCAGGTTGATCACAGCCGGCAAGCCTTAAACGCACAACGGCGCCCATTCGCATT
Pseudomonas fluorescens Pf-5
	PFL_5798	ahcY	-127	58.8	TGTCCGAGGGGCGCTGCAGCAGGCATGACCTGTCAGGCTCGGATGGGGCGTTGTTGGTACAGGGCTCCCTGTATGGACACTAAACGCACAACGGCGCCCATTCGCACA
Pseudomonas mendocina ymp
	Pmen_0449	ahcY	-115	57.3	CCCGTCCGAGGGGCGCTGCAGCAGGTCGGTCGACACCGGTTTGTCAGGCTCGGATGGGGCGTTAACCATACGCATCAACGGCGCCCATTCGCA
Pseudomonas stutzeri A1501
	PST_3935	ahcY	-110	61	CACCCGAGGGGCGCTGCAGCAGGTTCCAGAACCTGTCAGGCTCGGATGGGGCGTTTCCTCGAACGCATCAACGGCGCCCATTCGCAAC
Azotobacter vinelandii AvOP
	Avin_03570	ahcY	-123	65.1	CCCTTCCGAGGGGCGCTGCAGCAGGCCTGCCAACGGCCTGTCAGGCTCGGAAGGGGCGTTTTCCGAACGCATCAACGGCGCCCATTCGCA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD