Profile of regulator SAH_riboswitch in Pseudomonadaceae
Properties
| Regulator family: |
RF01057 |
| Regulation mode: |
|
| Biological process: |
Methionine metabolism |
| Effector: |
S-adenosylhomocysteine |
| Regulog: |
SAH_riboswitch - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA0432 |
ahcY |
-128 |
38 |
CCGTTCGAGGGGCGCTGCAGCAGGCCTAGGCCTGTCAGGCTCGAACGGA |
|
Pseudomonas entomophila L48
|
|
PSEEN5037 |
ahcY |
-112 |
32.6 |
CGAGGGGCGCTGCAGCAGGTTCGTCCTGTCAGGCTCGGTC |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO5068 |
ahcY |
-132 |
60.7 |
TGTCCGAGGGGCGCTGCAGCAGGTTTACCCTGTCAGGCTCGGATGGGGCGTTGTTTGTCAGGTTGATCACAGCCGGCAAGCCTTAAACGCACAACGGCGCCCATTCGCATT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_5798 |
ahcY |
-127 |
58.8 |
TGTCCGAGGGGCGCTGCAGCAGGCATGACCTGTCAGGCTCGGATGGGGCGTTGTTGGTACAGGGCTCCCTGTATGGACACTAAACGCACAACGGCGCCCATTCGCACA |
|
Pseudomonas mendocina ymp
|
|
Pmen_0449 |
ahcY |
-115 |
57.3 |
CCCGTCCGAGGGGCGCTGCAGCAGGTCGGTCGACACCGGTTTGTCAGGCTCGGATGGGGCGTTAACCATACGCATCAACGGCGCCCATTCGCA |
|
Pseudomonas stutzeri A1501
|
|
PST_3935 |
ahcY |
-110 |
61 |
CACCCGAGGGGCGCTGCAGCAGGTTCCAGAACCTGTCAGGCTCGGATGGGGCGTTTCCTCGAACGCATCAACGGCGCCCATTCGCAAC |
|
Azotobacter vinelandii AvOP
|
|
Avin_03570 |
ahcY |
-123 |
65.1 |
CCCTTCCGAGGGGCGCTGCAGCAGGCCTGCCAACGGCCTGTCAGGCTCGGAAGGGGCGTTTTCCGAACGCATCAACGGCGCCCATTCGCA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
